RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 EBF3Q9H4W6 596 aa6.79□□□□□ -1.32
UBB-208ENST00000578706 XPNPEP1Q9NQW7 623 aa6.79□□□□□ -1.32
UBB-208ENST00000578706 PRMT7Q9NVM4 692 aaPredicted RBP6.79□□□□□ -1.32
UBB-208ENST00000578706 PCOLCE2Q9UKZ9 415 aa6.79□□□□□ -1.32
UBB-208ENST00000578706 TBX20Q9UMR3 447 aa6.79□□□□□ -1.32
UBB-208ENST00000578706 APOBEC2Q9Y235 224 aaKnown RBP6.79□□□□□ -1.32
UBB-208ENST00000578706 LRBAP50851 2863 aa6.79□□□□□ -1.32
UBB-208ENST00000578706 KNL1Q8NG31 2342 aa6.79□□□□□ -1.32
UBB-208ENST00000578706 TLN1Q9Y490 2541 aaKnown RBP6.79□□□□□ -1.32
UBB-208ENST00000578706 LRRIQ4A6NIV6 560 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 TTLL13PA6NNM8 815 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 M0R2N6 131 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 ERVH48-1M5A8F1 160 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 LAD1O00515 517 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 SYN3O14994 580 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 POLR2DO15514 142 aaKnown RBP6.78□□□□□ -1.32
UBB-208ENST00000578706 SLC37A4O43826 429 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 SLC28A2O43868 658 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 NEMFO60524 1076 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 SLITRK3O94933 977 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 SMC2O95347 1197 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 ATP2B1P20020 1258 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 DRD1P21728 446 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 HOXD12P35452 270 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 CSRP3P50461 194 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 AMPD2Q01433 879 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 SLC14A1Q13336 389 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 ORC2Q13416 577 aaPredicted RBP6.78□□□□□ -1.32
UBB-208ENST00000578706 PRPF4BQ13523 1007 aaKnown RBP6.78□□□□□ -1.32
UBB-208ENST00000578706 MRPL58Q14197 206 aaKnown RBP6.78□□□□□ -1.32
UBB-208ENST00000578706 LY6DQ14210 128 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 POSTNQ15063 836 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 DUOXA1Q1HG43 343 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 DPCR1Q3MIW9 517 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 FBXO43Q4G163 708 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 CTXN3Q4LDR2 81 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 NT5DC1Q5TFE4 455 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 NCAPH2Q6IBW4 605 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 KRT25Q7Z3Z0 450 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 ZBTB8OSQ8IWT0 167 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 DRC7Q8IY82 874 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 MLKLQ8NB16 471 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 USP33Q8TEY7 942 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 UBE2Q2Q8WVN8 375 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 ACDQ96AP0 544 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 P2RY13Q9BPV8 354 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 PDZD7Q9H5P4 517 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 GOLGA2P5Q9HBQ8 144 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 KCNMB3Q9NPA1 279 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 GKN1Q9NS71 199 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 ANKEF1Q9NU02 776 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 THG1LQ9NWX6 298 aaKnown RBP6.78□□□□□ -1.32
UBB-208ENST00000578706 AFF4Q9UHB7 1163 aaKnown RBP6.78□□□□□ -1.32
UBB-208ENST00000578706 FBXL5Q9UKA1 691 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 CCL26Q9Y258 94 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 GDAQ9Y2T3 454 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 YIPF1Q9Y548 306 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 PCDHB9Q9Y5E1 797 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 MYLKQ15746 1914 aa6.78□□□□□ -1.32
UBB-208ENST00000578706 ANK1P16157 1881 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 MYO18AQ92614 2054 aaKnown RBP6.77□□□□□ -1.33
UBB-208ENST00000578706 FAM205CA6NFA0 338 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 BIN1O00499 593 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 ACKR2O00590 384 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 ACTN4O43707 911 aaKnown RBP6.77□□□□□ -1.33
UBB-208ENST00000578706 SLFN14P0C7P3 912 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 C6P13671 934 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 GCFC2P16383 781 aaKnown RBP6.77□□□□□ -1.33
UBB-208ENST00000578706 WEE1P30291 646 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 GJA4P35212 333 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 LONP1P36776 959 aaKnown RBP6.77□□□□□ -1.33
UBB-208ENST00000578706 PRPHP41219 470 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 TERF1P54274 439 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 EPHB3P54753 998 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 MYL5Q02045 173 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 TLE3Q04726 772 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 GRIN1Q05586 938 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 SOX4Q06945 474 aaPredicted RBP6.77□□□□□ -1.33
UBB-208ENST00000578706 PLD1Q13393 1074 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 PNOCQ13519 176 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 ZNF174Q15697 407 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 CRY1Q16526 586 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 FAM187BQ17R55 369 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 INF2Q27J81 1249 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 EARS2Q5JPH6 523 aaKnown RBP6.77□□□□□ -1.33
UBB-208ENST00000578706 GLRA4Q5JXX5 417 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 SPDYCQ5MJ68 293 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 GPR158Q5T848 1215 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 RNF19BQ6ZMZ0 732 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 PIK3AP1Q6ZUJ8 805 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 MAEAQ7L5Y9 396 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 APBB1IPQ7Z5R6 666 aaPredicted RBP6.77□□□□□ -1.33
UBB-208ENST00000578706 DEFB119Q8N690 84 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 PDCD7Q8N8D1 485 aaKnown RBP6.77□□□□□ -1.33
UBB-208ENST00000578706 SPC24Q8NBT2 197 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 BEST2Q8NFU1 509 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 SPATA20Q8TB22 786 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 ERCC4Q92889 916 aaPredicted RBP6.77□□□□□ -1.33
UBB-208ENST00000578706 SMARCE1Q969G3 411 aa6.77□□□□□ -1.33
UBB-208ENST00000578706 EXOC4Q96A65 974 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms