RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 RBM12Q9NTZ6 932 aaKnown RBP16.97■□□□□ 0.31
CRLF3-203ENST00000578692 DMAC2Q9NW81 257 aa16.97■□□□□ 0.31
CRLF3-203ENST00000578692 HPSEQ9Y251 543 aa16.97■□□□□ 0.31
CRLF3-203ENST00000578692 PTPRZ1P23471 2315 aaPredicted RBP16.97■□□□□ 0.31
CRLF3-203ENST00000578692 OBSL1O75147 1896 aa16.97■□□□□ 0.31
CRLF3-203ENST00000578692 F5P12259 2224 aa16.97■□□□□ 0.31
CRLF3-203ENST00000578692 LILRB5O75023 590 aa16.96■□□□□ 0.31
CRLF3-203ENST00000578692 TADA3O75528 432 aa16.96■□□□□ 0.31
CRLF3-203ENST00000578692 STAU1O95793 577 aaKnown RBP16.96■□□□□ 0.31
CRLF3-203ENST00000578692 MYL1P05976 194 aa16.96■□□□□ 0.31
CRLF3-203ENST00000578692 CXCL12P48061 93 aa16.96■□□□□ 0.31
CRLF3-203ENST00000578692 CASP4P49662 377 aa16.96■□□□□ 0.31
CRLF3-203ENST00000578692 AP3M2P53677 418 aa16.96■□□□□ 0.31
CRLF3-203ENST00000578692 RUNX3Q13761 415 aa16.96■□□□□ 0.31
CRLF3-203ENST00000578692 GAS6Q14393 721 aa16.96■□□□□ 0.31
CRLF3-203ENST00000578692 ZNF268Q14587 947 aaPredicted RBP16.96■□□□□ 0.31
CRLF3-203ENST00000578692 CC2D1AQ6P1N0 951 aaPredicted RBP16.96■□□□□ 0.31
CRLF3-203ENST00000578692 SPEM1Q8N4L4 309 aa16.96■□□□□ 0.31
CRLF3-203ENST00000578692 PLEKHO2Q8TD55 490 aa16.96■□□□□ 0.31
CRLF3-203ENST00000578692 PARD3BQ8TEW8 1205 aa16.96■□□□□ 0.31
CRLF3-203ENST00000578692 SYAP1Q96A49 352 aaPredicted RBP16.96■□□□□ 0.31
CRLF3-203ENST00000578692 PCED1BQ96HM7 432 aa16.96■□□□□ 0.31
CRLF3-203ENST00000578692 SPATA17Q96L03 361 aa16.96■□□□□ 0.31
CRLF3-203ENST00000578692 CEP295NLQ96MC4 621 aa16.96■□□□□ 0.31
CRLF3-203ENST00000578692 CYP2S1Q96SQ9 504 aa16.96■□□□□ 0.31
CRLF3-203ENST00000578692 HINFPQ9BQA5 517 aa16.96■□□□□ 0.31
CRLF3-203ENST00000578692 TRPC7Q9HCX4 862 aa16.96■□□□□ 0.31
CRLF3-203ENST00000578692 NXF1Q9UBU9 619 aaKnown RBP16.96■□□□□ 0.31
CRLF3-203ENST00000578692 NME7Q9Y5B8 376 aa16.96■□□□□ 0.31
CRLF3-203ENST00000578692 KIF26AQ9ULI4 1882 aaPredicted RBP16.96■□□□□ 0.3
CRLF3-203ENST00000578692 CFAP54Q96N23 3096 aa16.95■□□□□ 0.3
CRLF3-203ENST00000578692 PDXKO00764 312 aa16.95■□□□□ 0.3
CRLF3-203ENST00000578692 USP17L7P0C7H9 530 aa16.95■□□□□ 0.3
CRLF3-203ENST00000578692 PTPN1P18031 435 aaKnown RBP16.95■□□□□ 0.3
CRLF3-203ENST00000578692 ANXA13P27216 316 aa16.95■□□□□ 0.3
CRLF3-203ENST00000578692 SYKP43405 635 aa16.95■□□□□ 0.3
CRLF3-203ENST00000578692 FAM160A1Q05DH4 1040 aa16.95■□□□□ 0.3
CRLF3-203ENST00000578692 MDH1BQ5I0G3 518 aa16.95■□□□□ 0.3
CRLF3-203ENST00000578692 WDR44Q5JSH3 913 aa16.95■□□□□ 0.3
CRLF3-203ENST00000578692 TRIM68Q6AZZ1 485 aa16.95■□□□□ 0.3
CRLF3-203ENST00000578692 SLC9A9Q8IVB4 645 aa16.95■□□□□ 0.3
CRLF3-203ENST00000578692 DCLK2Q8N568 766 aa16.95■□□□□ 0.3
CRLF3-203ENST00000578692 TMEM174Q8WUU8 243 aa16.95■□□□□ 0.3
CRLF3-203ENST00000578692 XYLT2Q9H1B5 865 aa16.95■□□□□ 0.3
CRLF3-203ENST00000578692 KCTD10Q9H3F6 313 aa16.95■□□□□ 0.3
CRLF3-203ENST00000578692 EBF3Q9H4W6 596 aa16.95■□□□□ 0.3
CRLF3-203ENST00000578692 HPS4Q9NQG7 708 aa16.95■□□□□ 0.3
CRLF3-203ENST00000578692 ATP6V1DQ9Y5K8 247 aa16.95■□□□□ 0.3
CRLF3-203ENST00000578692 TRAV19A0A0A6YYK7 116 aa16.94■□□□□ 0.3
CRLF3-203ENST00000578692 FAM237AA0A1B0GTK4 181 aa16.94■□□□□ 0.3
CRLF3-203ENST00000578692 LRRIQ3A6PVS8 624 aaPredicted RBP16.94■□□□□ 0.3
CRLF3-203ENST00000578692 A8MXQ7 604 aa16.94■□□□□ 0.3
CRLF3-203ENST00000578692 TRIM66O15016 1216 aa16.94■□□□□ 0.3
CRLF3-203ENST00000578692 C4BPAP04003 597 aaKnown RBP16.94■□□□□ 0.3
CRLF3-203ENST00000578692 TDGF1P13385 188 aa16.94■□□□□ 0.3
CRLF3-203ENST00000578692 NDUFA8P51970 172 aa16.94■□□□□ 0.3
CRLF3-203ENST00000578692 CLDN10P78369 228 aa16.94■□□□□ 0.3
CRLF3-203ENST00000578692 SATB1Q01826 763 aa16.94■□□□□ 0.3
CRLF3-203ENST00000578692 BIRC3Q13489 604 aa16.94■□□□□ 0.3
CRLF3-203ENST00000578692 TDRD10Q5VZ19 366 aaKnown RBP16.94■□□□□ 0.3
CRLF3-203ENST00000578692 DENND5BQ6ZUT9 1274 aa16.94■□□□□ 0.3
CRLF3-203ENST00000578692 KIAA2013Q8IYS2 634 aa16.94■□□□□ 0.3
CRLF3-203ENST00000578692 SYNPOQ8N3V7 929 aa16.94■□□□□ 0.3
CRLF3-203ENST00000578692 ARL14EPQ8N8R7 260 aaPredicted RBP16.94■□□□□ 0.3
CRLF3-203ENST00000578692 RIN3Q8TB24 985 aa16.94■□□□□ 0.3
CRLF3-203ENST00000578692 SLC22A12Q96S37 553 aa16.94■□□□□ 0.3
CRLF3-203ENST00000578692 SCAND2PQ9GZW5 306 aaPredicted RBP16.94■□□□□ 0.3
CRLF3-203ENST00000578692 VRTNQ9H8Y1 702 aa16.94■□□□□ 0.3
CRLF3-203ENST00000578692 EHD2Q9NZN4 543 aa16.94■□□□□ 0.3
CRLF3-203ENST00000578692 FAM186AA6NE01 2351 aa16.94■□□□□ 0.3
CRLF3-203ENST00000578692 GREB1Q4ZG55 1949 aa16.93■□□□□ 0.3
CRLF3-203ENST00000578692 C2orf78A6NCI8 922 aa16.93■□□□□ 0.3
CRLF3-203ENST00000578692 OTOL1A6NHN0 477 aaPredicted RBP16.93■□□□□ 0.3
CRLF3-203ENST00000578692 RPN1P04843 607 aaKnown RBP16.93■□□□□ 0.3
CRLF3-203ENST00000578692 CKMP06732 381 aa16.93■□□□□ 0.3
CRLF3-203ENST00000578692 HDCP19113 662 aa16.93■□□□□ 0.3
CRLF3-203ENST00000578692 AMPD2Q01433 879 aa16.93■□□□□ 0.3
CRLF3-203ENST00000578692 CCINQ13939 588 aa16.93■□□□□ 0.3
CRLF3-203ENST00000578692 Q6ZS52 159 aa16.93■□□□□ 0.3
CRLF3-203ENST00000578692 CCDC47Q96A33 483 aaKnown RBP16.93■□□□□ 0.3
CRLF3-203ENST00000578692 C8orf48Q96LL4 319 aa16.93■□□□□ 0.3
CRLF3-203ENST00000578692 EPC1Q9H2F5 836 aa16.93■□□□□ 0.3
CRLF3-203ENST00000578692 DPEP3Q9H4B8 488 aa16.93■□□□□ 0.3
CRLF3-203ENST00000578692 GCNT4Q9P109 453 aa16.93■□□□□ 0.3
CRLF3-203ENST00000578692 RIF1Q5UIP0 2472 aaKnown RBP16.93■□□□□ 0.3
CRLF3-203ENST00000578692 F8VP50 259 aa16.92■□□□□ 0.3
CRLF3-203ENST00000578692 KIF20AO95235 890 aa16.92■□□□□ 0.3
CRLF3-203ENST00000578692 NR3C1P04150 777 aa16.92■□□□□ 0.3
CRLF3-203ENST00000578692 ARSAP15289 507 aa16.92■□□□□ 0.3
CRLF3-203ENST00000578692 ID4P47928 161 aa16.92■□□□□ 0.3
CRLF3-203ENST00000578692 CDH8P55286 799 aa16.92■□□□□ 0.3
CRLF3-203ENST00000578692 USP46P62068 366 aa16.92■□□□□ 0.3
CRLF3-203ENST00000578692 DLG4P78352 724 aa16.92■□□□□ 0.3
CRLF3-203ENST00000578692 NCOA4Q13772 614 aa16.92■□□□□ 0.3
CRLF3-203ENST00000578692 MTF1Q14872 753 aa16.92■□□□□ 0.3
CRLF3-203ENST00000578692 PDGFRLQ15198 375 aa16.92■□□□□ 0.3
CRLF3-203ENST00000578692 ZNF699Q32M78 642 aa16.92■□□□□ 0.3
CRLF3-203ENST00000578692 ZNF667Q5HYK9 610 aa16.92■□□□□ 0.3
CRLF3-203ENST00000578692 TTC16Q8NEE8 873 aa16.92■□□□□ 0.3
CRLF3-203ENST00000578692 DUS2Q9NX74 493 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms