RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 FOXD4L1Q9NU39 408 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 TMEM74BQ9NUR3 256 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 ORC3Q9UBD5 711 aaPredicted RBP7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 KCNJ14Q9UNX9 436 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 APOBEC2Q9Y235 224 aaKnown RBP7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 CCL26Q9Y258 94 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 INVSQ9Y283 1065 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 OBSL1O75147 1896 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 NBASA2RRP1 2371 aa7.78□□□□□ -1.16
CDK5RAP3-209ENST00000578663 XPOTO43592 962 aaKnown RBP7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 NEMFO60524 1076 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 GJB3O75712 270 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 CFIP05156 583 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 SYPP08247 313 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 ODC1P11926 461 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 TCF3P15923 654 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 ADSSP30520 456 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 NLRP12P59046 1061 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 FAM160A1Q05DH4 1040 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 NR1H3Q13133 447 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 TRIP6Q15654 476 aaKnown RBP7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 ZNF77Q15935 545 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 MAP7D1Q3KQU3 841 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 NAIF1Q69YI7 327 aaPredicted RBP7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 ARMCX5Q6P1M9 558 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 TOGARAM2Q6ZUX3 1019 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 PRICKLE2Q7Z3G6 844 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 TMEM150AQ86TG1 271 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 MON1AQ86VX9 555 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 CATSPER3Q86XQ3 398 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 KIAA1958Q8N8K9 716 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 RIN3Q8TB24 985 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 SPPL2BQ8TCT7 592 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 MRPS31Q92665 395 aaKnown RBP7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 LIN37Q96GY3 246 aaPredicted RBP7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 MTMR9Q96QG7 549 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 TSPAN18Q96SJ8 248 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 LPIN3Q9BQK8 851 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 LLPHQ9BRT6 129 aaKnown RBP7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 TMEM134Q9H6X4 195 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 PLEKHA5Q9HAU0 1116 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 POLMQ9NP87 494 aaPredicted RBP7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 GJB4Q9NTQ9 266 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 KIAA1522Q9P206 1035 aaPredicted RBP7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 ARHGAP28Q9P2N2 729 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 TUBGCP4Q9UGJ1 667 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 SLC27A5Q9Y2P5 690 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 ADGRG4Q8IZF6 3080 aa7.77□□□□□ -1.17
CDK5RAP3-209ENST00000578663 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 A0A1W2PQD8 194 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 E9PAM4 449 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 ARHGAP33O14559 1287 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 AP5Z1O43299 807 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 SOAT2O75908 522 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 NFATC1O95644 943 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 F11P03951 625 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 CYP11A1P05108 521 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 CHRM1P11229 460 aaPredicted RBP7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 ITPKAP23677 461 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 RPA1P27694 616 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 GJB2P29033 226 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 IFNAR2P48551 515 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 OSTNP61366 133 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 PSMD2Q13200 908 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 NOLC1Q14978 699 aaKnown RBP eCLIP7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 ZBTB6Q15916 424 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 TAF12Q16514 161 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 EML3Q32P44 896 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 SLC10A6Q3KNW5 377 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 MGAT5BQ3V5L5 792 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 SLC36A4Q6YBV0 504 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 NAXDQ8IW45 347 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 MAB21L3Q8N8X9 362 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 SPRYD3Q8NCJ5 442 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 TNFRSF25Q93038 417 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 PSMG3-AS1Q96PY0 264 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 SEPT5Q99719 369 aaPredicted RBP7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 PI4K2AQ9BTU6 479 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 GTPBP2Q9BX10 602 aaKnown RBP7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 DUS2Q9NX74 493 aaKnown RBP7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 UBQLN1Q9UMX0 589 aaKnown RBP7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 SMC3Q9UQE7 1217 aa7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 RBM19Q9Y4C8 960 aaKnown RBP7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 TIMM13Q9Y5L4 95 aaPredicted RBP7.76□□□□□ -1.17
CDK5RAP3-209ENST00000578663 MTORP42345 2549 aa7.75□□□□□ -1.17
CDK5RAP3-209ENST00000578663 A0A087WWV3 80 aa7.75□□□□□ -1.17
CDK5RAP3-209ENST00000578663 TTC26A0AVF1 554 aa7.75□□□□□ -1.17
CDK5RAP3-209ENST00000578663 CLEC18AA5D8T8 446 aa7.75□□□□□ -1.17
CDK5RAP3-209ENST00000578663 K7EQS6 105 aa7.75□□□□□ -1.17
CDK5RAP3-209ENST00000578663 SH3BP5O60239 455 aa7.75□□□□□ -1.17
CDK5RAP3-209ENST00000578663 MED24O75448 989 aa7.75□□□□□ -1.17
CDK5RAP3-209ENST00000578663 TOM1L1O75674 476 aa7.75□□□□□ -1.17
CDK5RAP3-209ENST00000578663 DKK1O94907 266 aa7.75□□□□□ -1.17
CDK5RAP3-209ENST00000578663 CSH1P0DML2 217 aa7.75□□□□□ -1.17
CDK5RAP3-209ENST00000578663 CSH2P0DML3 217 aa7.75□□□□□ -1.17
CDK5RAP3-209ENST00000578663 HAPLN1P10915 354 aaPredicted RBP7.75□□□□□ -1.17
CDK5RAP3-209ENST00000578663 HNRNPLP14866 589 aaKnown RBP eCLIP7.75□□□□□ -1.17
CDK5RAP3-209ENST00000578663 HMGA1P17096 107 aaKnown RBP7.75□□□□□ -1.17
CDK5RAP3-209ENST00000578663 U2AF2P26368 475 aaKnown RBP eCLIP7.75□□□□□ -1.17
CDK5RAP3-209ENST00000578663 OPRD1P41143 372 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms