RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 E5RJQ4 531 aa19.57■□□□□ 0.72
PRKCA-203ENST00000578063 XPO1O14980 1071 aaKnown RBP19.57■□□□□ 0.72
PRKCA-203ENST00000578063 FAM200BP0CF97 657 aa19.57■□□□□ 0.72
PRKCA-203ENST00000578063 NPR3P17342 541 aa19.57■□□□□ 0.72
PRKCA-203ENST00000578063 MAN1A1P33908 653 aa19.57■□□□□ 0.72
PRKCA-203ENST00000578063 ACADSBP45954 432 aa19.57■□□□□ 0.72
PRKCA-203ENST00000578063 PLA2G4AP47712 749 aa19.57■□□□□ 0.72
PRKCA-203ENST00000578063 RPL34P49207 117 aaKnown RBP19.57■□□□□ 0.72
PRKCA-203ENST00000578063 DNA2P51530 1060 aa19.57■□□□□ 0.72
PRKCA-203ENST00000578063 WDR5P61964 334 aaKnown RBP19.57■□□□□ 0.72
PRKCA-203ENST00000578063 PTPROQ16827 1216 aa19.57■□□□□ 0.72
PRKCA-203ENST00000578063 ZDHHC17Q8IUH5 632 aa19.57■□□□□ 0.72
PRKCA-203ENST00000578063 UBL4BQ8N7F7 174 aa19.57■□□□□ 0.72
PRKCA-203ENST00000578063 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.57■□□□□ 0.72
PRKCA-203ENST00000578063 PBKQ96KB5 322 aa19.57■□□□□ 0.72
PRKCA-203ENST00000578063 HSFY1Q96LI6 401 aa19.57■□□□□ 0.72
PRKCA-203ENST00000578063 PSMB7Q99436 277 aa19.57■□□□□ 0.72
PRKCA-203ENST00000578063 TRIM7Q9C029 511 aa19.57■□□□□ 0.72
PRKCA-203ENST00000578063 MARCH5Q9NX47 278 aa19.57■□□□□ 0.72
PRKCA-203ENST00000578063 MYBPHLA2RUH7 354 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 GOLGA8SH3BPF8 625 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 TULP2O00295 520 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 KCNK3O14649 394 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 OAZ2O95190 189 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 GALTP07902 379 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 KRT3P12035 628 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 GTF2F1P35269 517 aaKnown RBP eCLIP19.56■□□□□ 0.72
PRKCA-203ENST00000578063 RGS7P49802 495 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 PPIGQ13427 754 aaKnown RBP eCLIP19.56■□□□□ 0.722e-7■■■■□ 22.1
PRKCA-203ENST00000578063 CCDC142Q17RM4 750 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 FAM171BQ6P995 826 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 PAQR9Q6ZVX9 377 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 FAM35AQ86V20 835 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 COG1Q8WTW3 980 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 PCED1BQ96HM7 432 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 B3GNT5Q9BYG0 378 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 KRT82Q9NSB4 513 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 CCDC66A2RUB6 948 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 CXCR5P32302 372 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 RPL7AP62424 266 aaKnown RBP19.56■□□□□ 0.72
PRKCA-203ENST00000578063 CREG2Q8IUH2 290 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 OR10T2Q8NGX3 314 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 FNIP1Q8TF40 1166 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 CD101Q93033 1021 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 MYLPFQ96A32 169 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 CAPZA3Q96KX2 299 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 PKMYT1Q99640 499 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 HCSTQ9UBK5 93 aa19.56■□□□□ 0.72
PRKCA-203ENST00000578063 FNDC1Q4ZHG4 1894 aaPredicted RBP19.55■□□□□ 0.72
PRKCA-203ENST00000578063 CLDN5O00501 218 aa19.55■□□□□ 0.72
PRKCA-203ENST00000578063 ZNF185O15231 689 aa19.55■□□□□ 0.72
PRKCA-203ENST00000578063 DDX3YO15523 660 aaKnown RBP19.55■□□□□ 0.72
PRKCA-203ENST00000578063 GJB6O95452 261 aa19.55■□□□□ 0.72
PRKCA-203ENST00000578063 CTNNA2P26232 953 aa19.55■□□□□ 0.72
PRKCA-203ENST00000578063 CTNNA1P35221 906 aaKnown RBP19.55■□□□□ 0.72
PRKCA-203ENST00000578063 BCAR1P56945 870 aa19.55■□□□□ 0.72
PRKCA-203ENST00000578063 DEFB103AP81534 67 aa19.55■□□□□ 0.72
PRKCA-203ENST00000578063 FAM102AQ5T9C2 384 aaPredicted RBP19.55■□□□□ 0.72
PRKCA-203ENST00000578063 CCDC181Q5TID7 509 aa19.55■□□□□ 0.72
PRKCA-203ENST00000578063 OR6B2Q6IFH4 312 aa19.55■□□□□ 0.72
PRKCA-203ENST00000578063 FUT10Q6P4F1 479 aa19.55■□□□□ 0.72
PRKCA-203ENST00000578063 CLEC20AQ6ZU45 233 aa19.55■□□□□ 0.72
PRKCA-203ENST00000578063 FAM183BPQ6ZVS7 135 aa19.55■□□□□ 0.72
PRKCA-203ENST00000578063 SMARCD1Q96GM5 515 aa19.55■□□□□ 0.72
PRKCA-203ENST00000578063 RPGRIP1Q96KN7 1286 aa19.55■□□□□ 0.72
PRKCA-203ENST00000578063 CARD9Q9H257 536 aa19.55■□□□□ 0.72
PRKCA-203ENST00000578063 METTL5Q9NRN9 209 aaKnown RBP19.55■□□□□ 0.72
PRKCA-203ENST00000578063 CTAGE15A4D2H0 777 aa19.54■□□□□ 0.72
PRKCA-203ENST00000578063 CARNS1A5YM72 827 aa19.54■□□□□ 0.72
PRKCA-203ENST00000578063 CTAGE8P0CG41 777 aa19.54■□□□□ 0.72
PRKCA-203ENST00000578063 ACRP10323 421 aa19.54■□□□□ 0.72
PRKCA-203ENST00000578063 SCNN1AP37088 669 aa19.54■□□□□ 0.72
PRKCA-203ENST00000578063 PAFAH1B1P43034 410 aa19.54■□□□□ 0.72
PRKCA-203ENST00000578063 ALDH7A1P49419 539 aaKnown RBP19.54■□□□□ 0.72
PRKCA-203ENST00000578063 PIGHQ14442 188 aaPredicted RBP19.54■□□□□ 0.72
PRKCA-203ENST00000578063 FAM171A1Q5VUB5 890 aa19.54■□□□□ 0.72
PRKCA-203ENST00000578063 OLFML1Q6UWY5 402 aa19.54■□□□□ 0.72
PRKCA-203ENST00000578063 CTAGE6Q86UF2 777 aa19.54■□□□□ 0.72
PRKCA-203ENST00000578063 PIGZQ86VD9 579 aa19.54■□□□□ 0.72
PRKCA-203ENST00000578063 CTAGE4Q8IX94 777 aa19.54■□□□□ 0.72
PRKCA-203ENST00000578063 NIPA2Q8N8Q9 360 aa19.54■□□□□ 0.72
PRKCA-203ENST00000578063 KCTD13Q8WZ19 329 aa19.54■□□□□ 0.72
PRKCA-203ENST00000578063 ZNF689Q96CS4 500 aaPredicted RBP19.54■□□□□ 0.72
PRKCA-203ENST00000578063 RC3H2Q9HBD1 1191 aaKnown RBP19.54■□□□□ 0.72
PRKCA-203ENST00000578063 UQCRHLA0A096LP55 91 aa19.54■□□□□ 0.72
PRKCA-203ENST00000578063 CTIFO43310 598 aaKnown RBP19.54■□□□□ 0.72
PRKCA-203ENST00000578063 AP1G2O75843 785 aa19.54■□□□□ 0.72
PRKCA-203ENST00000578063 UQCRHP07919 91 aa19.54■□□□□ 0.72
PRKCA-203ENST00000578063 FGFR3P22607 806 aa19.54■□□□□ 0.72
PRKCA-203ENST00000578063 RFC1P35251 1148 aaPredicted RBP19.54■□□□□ 0.72
PRKCA-203ENST00000578063 FPGSQ05932 587 aa19.54■□□□□ 0.72
PRKCA-203ENST00000578063 CFAP221Q4G0U5 840 aa19.54■□□□□ 0.72
PRKCA-203ENST00000578063 VARS2Q5ST30 1063 aaKnown RBP19.54■□□□□ 0.72
PRKCA-203ENST00000578063 ZNF280DQ6N043 979 aa19.54■□□□□ 0.72
PRKCA-203ENST00000578063 ZNF572Q7Z3I7 529 aaPredicted RBP19.54■□□□□ 0.72
PRKCA-203ENST00000578063 CMTR2Q8IYT2 770 aaKnown RBP19.54■□□□□ 0.72
PRKCA-203ENST00000578063 CWH43Q9H720 699 aa19.54■□□□□ 0.72
PRKCA-203ENST00000578063 COL4A6Q14031 1691 aa19.53■□□□□ 0.72
PRKCA-203ENST00000578063 EFCAB8A8MWE9 144 aa19.53■□□□□ 0.72
PRKCA-203ENST00000578063 PAPSS1O43252 624 aaPredicted RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms