RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 MATR3P43243 847 aaKnown RBP eCLIP14.98□□□□□ -0.01
SREBF1-217ENST00000577897 KIF11P52732 1056 aa14.98□□□□□ -0.01
SREBF1-217ENST00000577897 SATB1Q01826 763 aa14.98□□□□□ -0.01
SREBF1-217ENST00000577897 DSC1Q08554 894 aa14.98□□□□□ -0.01
SREBF1-217ENST00000577897 SF3A2Q15428 464 aaKnown RBP14.98□□□□□ -0.01
SREBF1-217ENST00000577897 CCDC6Q16204 474 aa14.98□□□□□ -0.01
SREBF1-217ENST00000577897 SNRNP35Q16560 246 aaKnown RBP14.98□□□□□ -0.01
SREBF1-217ENST00000577897 IFI16Q16666 785 aaKnown RBP14.98□□□□□ -0.01
SREBF1-217ENST00000577897 PABPC1LQ4VXU2 614 aaKnown RBP14.98□□□□□ -0.01
SREBF1-217ENST00000577897 HEATR6Q6AI08 1181 aaKnown RBP14.98□□□□□ -0.01
SREBF1-217ENST00000577897 TRIM65Q6PJ69 517 aa14.98□□□□□ -0.01
SREBF1-217ENST00000577897 RDH13Q8NBN7 331 aa14.98□□□□□ -0.01
SREBF1-217ENST00000577897 SMG8Q8ND04 991 aaKnown RBP14.98□□□□□ -0.01
SREBF1-217ENST00000577897 ACRBPQ8NEB7 543 aa14.98□□□□□ -0.01
SREBF1-217ENST00000577897 MNS1Q8NEH6 495 aa14.98□□□□□ -0.01
SREBF1-217ENST00000577897 MCRS1Q96EZ8 462 aa14.98□□□□□ -0.01
SREBF1-217ENST00000577897 ALS2CR12Q96Q35 445 aa14.98□□□□□ -0.01
SREBF1-217ENST00000577897 STK33Q9BYT3 514 aa14.98□□□□□ -0.01
SREBF1-217ENST00000577897 GANQ9H2C0 597 aa14.98□□□□□ -0.01
SREBF1-217ENST00000577897 RNF39Q9H2S5 420 aa14.98□□□□□ -0.01
SREBF1-217ENST00000577897 LMAN1LQ9HAT1 526 aa14.98□□□□□ -0.01
SREBF1-217ENST00000577897 IFT122Q9HBG6 1241 aa14.98□□□□□ -0.01
SREBF1-217ENST00000577897 UBN1Q9NPG3 1134 aa14.98□□□□□ -0.01
SREBF1-217ENST00000577897 MIOSQ9NXC5 875 aa14.98□□□□□ -0.01
SREBF1-217ENST00000577897 ADAM28Q9UKQ2 775 aa14.98□□□□□ -0.01
SREBF1-217ENST00000577897 HES2Q9Y543 173 aa14.98□□□□□ -0.01
SREBF1-217ENST00000577897 IPPQ9Y573 584 aa14.98□□□□□ -0.01
SREBF1-217ENST00000577897 LOC400499M0QZD8 3231 aa14.98□□□□□ -0.01
SREBF1-217ENST00000577897 TDRD15B5MCY1 1934 aaKnown RBP14.98□□□□□ -0.01
SREBF1-217ENST00000577897 EXTL3O43909 919 aa14.97□□□□□ -0.01
SREBF1-217ENST00000577897 TACC1O75410 805 aa14.97□□□□□ -0.01
SREBF1-217ENST00000577897 ECI2O75521 394 aa14.97□□□□□ -0.01
SREBF1-217ENST00000577897 NOL4O94818 638 aa14.97□□□□□ -0.01
SREBF1-217ENST00000577897 LCA5LO95447 670 aa14.97□□□□□ -0.01
SREBF1-217ENST00000577897 PIGRP01833 764 aa14.97□□□□□ -0.01
SREBF1-217ENST00000577897 EIF4A3P38919 411 aaKnown RBP14.97□□□□□ -0.01
SREBF1-217ENST00000577897 MAGEA1P43355 309 aa14.97□□□□□ -0.01
SREBF1-217ENST00000577897 MXI1P50539 228 aa14.97□□□□□ -0.01
SREBF1-217ENST00000577897 GRM2Q14416 872 aa14.97□□□□□ -0.01
SREBF1-217ENST00000577897 SURF1Q15526 300 aa14.97□□□□□ -0.01
SREBF1-217ENST00000577897 ZNF569Q5MCW4 686 aa14.97□□□□□ -0.01
SREBF1-217ENST00000577897 RTP2Q5QGT7 225 aa14.97□□□□□ -0.01
SREBF1-217ENST00000577897 KRT39Q6A163 491 aa14.97□□□□□ -0.01
SREBF1-217ENST00000577897 CEP68Q76N32 757 aa14.97□□□□□ -0.01
SREBF1-217ENST00000577897 CEP57Q86XR8 500 aa14.97□□□□□ -0.01
SREBF1-217ENST00000577897 SLC7A14Q8TBB6 771 aa14.97□□□□□ -0.01
SREBF1-217ENST00000577897 HASPINQ8TF76 798 aa14.97□□□□□ -0.01
SREBF1-217ENST00000577897 TMEM143Q96AN5 459 aa14.97□□□□□ -0.01
SREBF1-217ENST00000577897 FNBP1Q96RU3 617 aa14.97□□□□□ -0.01
SREBF1-217ENST00000577897 CEP89Q96ST8 783 aa14.97□□□□□ -0.01
SREBF1-217ENST00000577897 NAPGQ99747 312 aaPredicted RBP14.97□□□□□ -0.01
SREBF1-217ENST00000577897 CBWD1Q9BRT8 395 aa14.97□□□□□ -0.01
SREBF1-217ENST00000577897 EIF2AQ9BY44 585 aaKnown RBP14.97□□□□□ -0.01
SREBF1-217ENST00000577897 MRPL4Q9BYD3 311 aaKnown RBP14.97□□□□□ -0.01
SREBF1-217ENST00000577897 MINDY3Q9H8M7 445 aa14.97□□□□□ -0.01
SREBF1-217ENST00000577897 APEX2Q9UBZ4 518 aa14.97□□□□□ -0.01
SREBF1-217ENST00000577897 MRPS23Q9Y3D9 190 aaKnown RBP14.97□□□□□ -0.01
SREBF1-217ENST00000577897 ATP8B3O60423 1300 aa14.96□□□□□ -0.01
SREBF1-217ENST00000577897 MAN2B1O00754 1011 aa14.96□□□□□ -0.01
SREBF1-217ENST00000577897 TADA2AO75478 443 aa14.96□□□□□ -0.01
SREBF1-217ENST00000577897 SRGAP2CP0DJJ0 459 aa14.96□□□□□ -0.01
SREBF1-217ENST00000577897 SLC9A1P19634 815 aa14.96□□□□□ -0.01
SREBF1-217ENST00000577897 GLRA2P23416 452 aa14.96□□□□□ -0.01
SREBF1-217ENST00000577897 HOXA11P31270 313 aaPredicted RBP14.96□□□□□ -0.01
SREBF1-217ENST00000577897 CXCL12P48061 93 aa14.96□□□□□ -0.01
SREBF1-217ENST00000577897 AP3M2P53677 418 aa14.96□□□□□ -0.01
SREBF1-217ENST00000577897 MCCD1P59942 119 aaPredicted RBP14.96□□□□□ -0.01
SREBF1-217ENST00000577897 SMYD5Q6GMV2 418 aa14.96□□□□□ -0.01
SREBF1-217ENST00000577897 ZPBP2Q6X784 338 aa14.96□□□□□ -0.01
SREBF1-217ENST00000577897 ENOSF1Q7L5Y1 443 aa14.96□□□□□ -0.01
SREBF1-217ENST00000577897 MTERF4Q7Z6M4 381 aaKnown RBP14.96□□□□□ -0.01
SREBF1-217ENST00000577897 RNF10Q8N5U6 811 aaKnown RBP14.96□□□□□ -0.01
SREBF1-217ENST00000577897 FAM160A2Q8N612 972 aaPredicted RBP14.96□□□□□ -0.01
SREBF1-217ENST00000577897 KDF1Q8NAX2 398 aaPredicted RBP14.96□□□□□ -0.01
SREBF1-217ENST00000577897 TRIM58Q8NG06 486 aa14.96□□□□□ -0.01
SREBF1-217ENST00000577897 FAM3CQ92520 227 aa14.96□□□□□ -0.01
SREBF1-217ENST00000577897 DNASE1L2Q92874 299 aa14.96□□□□□ -0.01
SREBF1-217ENST00000577897 IER2Q9BTL4 223 aa14.96□□□□□ -0.01
SREBF1-217ENST00000577897 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.96□□□□□ -0.01
SREBF1-217ENST00000577897 HELZ2Q9BYK8 2649 aaKnown RBP14.96□□□□□ -0.01
SREBF1-217ENST00000577897 INTS2Q9H0H0 1204 aaKnown RBP14.96□□□□□ -0.01
SREBF1-217ENST00000577897 BRD9Q9H8M2 597 aa14.96□□□□□ -0.01
SREBF1-217ENST00000577897 TMEM8AQ9HCN3 771 aa14.96□□□□□ -0.01
SREBF1-217ENST00000577897 RXFP3Q9NSD7 469 aa14.96□□□□□ -0.01
SREBF1-217ENST00000577897 ARHGAP20Q9P2F6 1191 aa14.96□□□□□ -0.01
SREBF1-217ENST00000577897 DNMT3BQ9UBC3 853 aaKnown RBP14.96□□□□□ -0.01
SREBF1-217ENST00000577897 CACNG4Q9UBN1 327 aa14.96□□□□□ -0.01
SREBF1-217ENST00000577897 GUCA1BQ9UMX6 200 aa14.96□□□□□ -0.01
SREBF1-217ENST00000577897 PCDHA13Q9Y5I0 950 aa14.96□□□□□ -0.01
SREBF1-217ENST00000577897 ITPR1Q14643 2758 aa14.96□□□□□ -0.02
SREBF1-217ENST00000577897 AXIN1O15169 862 aa14.95□□□□□ -0.02
SREBF1-217ENST00000577897 ERLIN2O94905 339 aa14.95□□□□□ -0.02
SREBF1-217ENST00000577897 KCNK5O95279 499 aa14.95□□□□□ -0.02
SREBF1-217ENST00000577897 HOXA9P31269 272 aa14.95□□□□□ -0.02
SREBF1-217ENST00000577897 PRKCIP41743 596 aa14.95□□□□□ -0.02
SREBF1-217ENST00000577897 LIMK1P53667 647 aa14.95□□□□□ -0.02
SREBF1-217ENST00000577897 POU5F1BQ06416 359 aa14.95□□□□□ -0.02
SREBF1-217ENST00000577897 PSMD5Q16401 504 aa14.95□□□□□ -0.02
SREBF1-217ENST00000577897 SLC18A3Q16572 532 aa14.95□□□□□ -0.02
SREBF1-217ENST00000577897 MAPK6Q16659 721 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms