RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 MRPS23Q9Y3D9 190 aaKnown RBP7.56□□□□□ -1.2
CASC3-205ENST00000577605 HCN4Q9Y3Q4 1203 aa7.56□□□□□ -1.2
CASC3-205ENST00000577605 TRANK1O15050 2925 aa7.56□□□□□ -1.2
CASC3-205ENST00000577605 COL6A3P12111 3177 aa7.56□□□□□ -1.2
CASC3-205ENST00000577605 TMEM221A6NGB7 291 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 TTLL8A6PVC2 850 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 ANHXE9PGG2 379 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 M0R296 226 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 GABRDO14764 452 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 CLIC2O15247 247 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 CCL16O15467 120 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 SPINT1O43278 529 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 NDUFB5O43674 189 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 KINO60870 393 aaKnown RBP7.55□□□□□ -1.2
CASC3-205ENST00000577605 PHACTR2O75167 634 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 TACC1O75410 805 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 NR3C1P04150 777 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 RHOP08100 348 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 WEE2P0C1S8 567 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 DLATP10515 647 aaKnown RBP7.55□□□□□ -1.2
CASC3-205ENST00000577605 KRT13P13646 458 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 IGFBP6P24592 240 aaPredicted RBP7.55□□□□□ -1.2
CASC3-205ENST00000577605 CASP1P29466 404 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 GTF2H1P32780 548 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 PSMC2P35998 433 aaKnown RBP7.55□□□□□ -1.2
CASC3-205ENST00000577605 GUCY2FP51841 1108 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 EPHA5P54756 1037 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 RPL10AP62906 217 aaKnown RBP7.55□□□□□ -1.2
CASC3-205ENST00000577605 PFKPQ01813 784 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 BFSP1Q12934 665 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 SNW1Q13573 536 aaKnown RBP7.55□□□□□ -1.2
CASC3-205ENST00000577605 SGSM1Q2NKQ1 1148 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 ZNF658Q5TYW1 1059 aaPredicted RBP7.55□□□□□ -1.2
CASC3-205ENST00000577605 C4orf50Q6ZRC1 276 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 LIMS2Q7Z4I7 341 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 SUGP1Q8IWZ8 645 aaKnown RBP7.55□□□□□ -1.2
CASC3-205ENST00000577605 TTC39CQ8N584 583 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 KIAA0895Q8NCT3 520 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 CXorf38Q8TB03 319 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 SPATA20Q8TB22 786 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 PARD3BQ8TEW8 1205 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 SMARCE1Q969G3 411 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 SPACA7Q96KW9 195 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 TSG101Q99816 390 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 DUSP9Q99956 384 aaKnown RBP7.55□□□□□ -1.2
CASC3-205ENST00000577605 LRFN3Q9BTN0 628 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 MTMR12Q9C0I1 747 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 IKZF4Q9H2S9 585 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 ACBD3Q9H3P7 528 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 GOLPH3LQ9H4A5 285 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 FAM124BQ9H5Z6 455 aaPredicted RBP7.55□□□□□ -1.2
CASC3-205ENST00000577605 PIF1Q9H611 641 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 KCNK12Q9HB15 430 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 CYLDQ9NQC7 956 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 ASAH2Q9NR71 780 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 DNMT3BQ9UBC3 853 aaKnown RBP7.55□□□□□ -1.2
CASC3-205ENST00000577605 WNT16Q9UBV4 365 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 CDH9Q9ULB4 789 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 PCDHB5Q9Y5E4 795 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 PCDHGA11Q9Y5H2 935 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 TIMM13Q9Y5L4 95 aaPredicted RBP7.55□□□□□ -1.2
CASC3-205ENST00000577605 SNX9Q9Y5X1 595 aa7.55□□□□□ -1.2
CASC3-205ENST00000577605 MTMR11A4FU01 709 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 PPEF2O14830 753 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 CETN3O15182 167 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 ECI2O75521 394 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 SEC24AO95486 1093 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 HAPLN1P10915 354 aaPredicted RBP7.54□□□□□ -1.2
CASC3-205ENST00000577605 SRFP11831 508 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 WARSP23381 471 aaKnown RBP7.54□□□□□ -1.2
CASC3-205ENST00000577605 NR2F2P24468 414 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 CDC25CP30307 473 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 MAGEA11P43364 429 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 UBE2HP62256 183 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 TNNC1P63316 161 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 FKBP3Q00688 224 aaKnown RBP7.54□□□□□ -1.2
CASC3-205ENST00000577605 LRRC63Q05C16 580 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 TWF1Q12792 350 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 DUSP4Q13115 394 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 ADAM9Q13443 819 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 TAF12Q16514 161 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 CFAP221Q4G0U5 840 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 SLC39A12Q504Y0 691 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 ARHGAP15Q53QZ3 475 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 WSCD1Q658N2 575 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 GET4Q7L5D6 327 aaPredicted RBP7.54□□□□□ -1.2
CASC3-205ENST00000577605 NPAS3Q8IXF0 933 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 ADGRF2Q8IZF7 708 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 PDCL2Q8N4E4 241 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 SLC44A3Q8N4M1 653 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 CCDC150Q8NCX0 1101 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 FGF13Q92913 245 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 PSMG2Q969U7 264 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 CCDC127Q96BQ5 260 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 DHTKD1Q96HY7 919 aaPredicted RBP7.54□□□□□ -1.2
CASC3-205ENST00000577605 SHDQ96IW2 340 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 IMPG2Q9BZV3 1241 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 SNX25Q9H3E2 840 aa7.54□□□□□ -1.2
CASC3-205ENST00000577605 METTL14Q9HCE5 456 aaKnown RBP7.54□□□□□ -1.2
CASC3-205ENST00000577605 SLC2A4RGQ9NR83 387 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms