RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 ZACNQ401N2 412 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 SCARA5Q6ZMJ2 495 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 YAF2Q8IY57 180 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 GUF1Q8N442 669 aaKnown RBP13.53□□□□□ -0.24
SSH2-205ENST00000577483 ENGASEQ8NFI3 743 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 BPIFB1Q8TDL5 484 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 USP13Q92995 863 aaPredicted RBP13.53□□□□□ -0.24
SSH2-205ENST00000577483 CCDC47Q96A33 483 aaKnown RBP13.53□□□□□ -0.24
SSH2-205ENST00000577483 SLC22A12Q96S37 553 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 BCO2Q9BYV7 579 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 SDCBP2Q9H190 292 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 SNX25Q9H3E2 840 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 NDRG2Q9UN36 371 aaKnown RBP13.53□□□□□ -0.24
SSH2-205ENST00000577483 DPYSL4O14531 572 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 AKAP3O75969 853 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 TRIM49P0CI25 452 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 TRIM49CP0CI26 452 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 CCNE1P24864 410 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 AP3M2P53677 418 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 USP46P62068 366 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 TNK2Q07912 1038 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 MAPRE1Q15691 268 aaKnown RBP13.53□□□□□ -0.24
SSH2-205ENST00000577483 ARHGAP29Q52LW3 1261 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 WDR44Q5JSH3 913 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 VSTM1Q6UX27 236 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 SV2AQ7L0J3 742 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 TTC8Q8TAM2 541 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 TMC2Q8TDI7 906 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 FAM3CQ92520 227 aa13.53□□□□□ -0.24
SSH2-205ENST00000577483 ERCC4Q92889 916 aaPredicted RBP13.53□□□□□ -0.24
SSH2-205ENST00000577483 SPATA6Q9NWH7 488 aaPredicted RBP13.53□□□□□ -0.24
SSH2-205ENST00000577483 UXTQ9UBK9 157 aaPredicted RBP13.53□□□□□ -0.24
SSH2-205ENST00000577483 ZFHX2Q9C0A1 2572 aaPredicted RBP13.52□□□□□ -0.24
SSH2-205ENST00000577483 PRR23AA6NEV1 266 aa13.52□□□□□ -0.25
SSH2-205ENST00000577483 A8MXQ7 604 aa13.52□□□□□ -0.25
SSH2-205ENST00000577483 CLDN5O00501 218 aa13.52□□□□□ -0.25
SSH2-205ENST00000577483 MAPK13O15264 365 aa13.52□□□□□ -0.25
SSH2-205ENST00000577483 KIF20AO95235 890 aa13.52□□□□□ -0.25
SSH2-205ENST00000577483 FAM163BP0C2L3 166 aa13.52□□□□□ -0.25
SSH2-205ENST00000577483 SP9P0CG40 484 aa13.52□□□□□ -0.25
SSH2-205ENST00000577483 PTPN1P18031 435 aaKnown RBP13.52□□□□□ -0.25
SSH2-205ENST00000577483 DDX6P26196 483 aaKnown RBP eCLIP13.52□□□□□ -0.25
SSH2-205ENST00000577483 AVPR1AP37288 418 aa13.52□□□□□ -0.25
SSH2-205ENST00000577483 GRIK1P39086 918 aa13.52□□□□□ -0.25
SSH2-205ENST00000577483 RPS9P46781 194 aaKnown RBP13.52□□□□□ -0.25
SSH2-205ENST00000577483 ZNF667Q5HYK9 610 aa13.52□□□□□ -0.25
SSH2-205ENST00000577483 SPOPLQ6IQ16 392 aa13.52□□□□□ -0.25
SSH2-205ENST00000577483 TXNDC11Q6PKC3 985 aa13.52□□□□□ -0.25
SSH2-205ENST00000577483 MON1AQ86VX9 555 aa13.52□□□□□ -0.25
SSH2-205ENST00000577483 CELF5Q8N6W0 485 aaKnown RBP13.52□□□□□ -0.25
SSH2-205ENST00000577483 B3GALNT2Q8NCR0 500 aa13.52□□□□□ -0.25
SSH2-205ENST00000577483 CSGALNACT1Q8TDX6 532 aa13.52□□□□□ -0.25
SSH2-205ENST00000577483 MRPS31Q92665 395 aaKnown RBP13.52□□□□□ -0.25
SSH2-205ENST00000577483 SPATA17Q96L03 361 aa13.52□□□□□ -0.25
SSH2-205ENST00000577483 NELL2Q99435 816 aa13.52□□□□□ -0.25
SSH2-205ENST00000577483 ZNF518BQ9C0D4 1074 aa13.52□□□□□ -0.25
SSH2-205ENST00000577483 ZMYM5Q9UJ78 669 aa13.52□□□□□ -0.25
SSH2-205ENST00000577483 FRMD4BQ9Y2L6 1034 aa13.52□□□□□ -0.25
SSH2-205ENST00000577483 MRPS17Q9Y2R5 130 aaKnown RBP13.52□□□□□ -0.25
SSH2-205ENST00000577483 R4GN57 208 aa13.52□□□□□ -0.25
SSH2-205ENST00000577483 C2orf78A6NCI8 922 aa13.51□□□□□ -0.25
SSH2-205ENST00000577483 F8VP50 259 aa13.51□□□□□ -0.25
SSH2-205ENST00000577483 MAN2B1O00754 1011 aa13.51□□□□□ -0.25
SSH2-205ENST00000577483 CLSTN1O94985 981 aa13.51□□□□□ -0.25
SSH2-205ENST00000577483 CTHP32929 405 aa13.51□□□□□ -0.25
SSH2-205ENST00000577483 VAMP7P51809 220 aa13.51□□□□□ -0.25
SSH2-205ENST00000577483 PPP3CAQ08209 521 aa13.51□□□□□ -0.25
SSH2-205ENST00000577483 EEF2KMTQ96G04 330 aa13.51□□□□□ -0.25
SSH2-205ENST00000577483 CYP2S1Q96SQ9 504 aa13.51□□□□□ -0.25
SSH2-205ENST00000577483 B3GNT5Q9BYG0 378 aa13.51□□□□□ -0.25
SSH2-205ENST00000577483 TRPC7Q9HCX4 862 aa13.51□□□□□ -0.25
SSH2-205ENST00000577483 TDP1Q9NUW8 608 aa13.51□□□□□ -0.25
SSH2-205ENST00000577483 HMGXB4Q9UGU5 601 aa13.51□□□□□ -0.25
SSH2-205ENST00000577483 OTOL1A6NHN0 477 aaPredicted RBP13.5□□□□□ -0.25
SSH2-205ENST00000577483 SOBPA7XYQ1 873 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 SPECC1L-ADORA2AF8WAN1 911 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 IKBKBO14920 756 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 TRIM66O15016 1216 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 NCAM2O15394 837 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 ASS1P00966 412 aaKnown RBP13.5□□□□□ -0.25
SSH2-205ENST00000577483 HLA-DRAP01903 254 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 CHRNB1P11230 501 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 MAGEA9P43362 315 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 ASPAP45381 313 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 MLLT6P55198 1093 aaPredicted RBP13.5□□□□□ -0.25
SSH2-205ENST00000577483 FAM160A1Q05DH4 1040 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 MTAPQ13126 283 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 TRIM68Q6AZZ1 485 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 DENND5BQ6ZUT9 1274 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 FAM186BQ8IYM0 893 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 NKD2Q969F2 451 aaPredicted RBP13.5□□□□□ -0.25
SSH2-205ENST00000577483 CHFRQ96EP1 664 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 FAM83CQ9BQN1 747 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 CHRDQ9H2X0 955 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 HPS4Q9NQG7 708 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.5□□□□□ -0.25
SSH2-205ENST00000577483 GCNT4Q9P109 453 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 WDR87Q6ZQQ6 2873 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 LAMTOR5O43504 91 aa13.5□□□□□ -0.25
SSH2-205ENST00000577483 ANXA13P27216 316 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms