RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 U2AF2P26368 475 aaKnown RBP eCLIP6.81□□□□□ -1.32
NUP88-212ENST00000576708 NPTX2P47972 431 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 TRAPPC10P48553 1259 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 RPS26P62854 115 aaKnown RBP6.81□□□□□ -1.32
NUP88-212ENST00000576708 HMGN5P82970 282 aaKnown RBP6.81□□□□□ -1.32
NUP88-212ENST00000576708 CREMQ03060 361 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 MAPK7Q13164 816 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 ORC2Q13416 577 aaPredicted RBP6.81□□□□□ -1.32
NUP88-212ENST00000576708 HTR4Q13639 388 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 PDIA5Q14554 519 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 PPP2R5AQ15172 486 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 DCAF4L1Q3SXM0 396 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 ZNF568Q3ZCX4 644 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 SPECC1Q5M775 1068 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 PPM1LQ5SGD2 360 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 LIN9Q5TKA1 542 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 ERICH6BQ5W0A0 696 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 MCTP1Q6DN14 999 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 RINT1Q6NUQ1 792 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 DCLRE1AQ6PJP8 1040 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 PARM1Q6UWI2 310 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 CYP26C1Q6V0L0 522 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 C1orf186Q6ZWK4 172 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 DYMQ7RTS9 669 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 CCDC105Q8IYK2 499 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 IGSF22Q8N9C0 903 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 DTWD2Q8NBA8 298 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 SLC7A14Q8TBB6 771 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 ING5Q8WYH8 240 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 STAMQ92783 540 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 KIFAP3Q92845 792 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 FGF14Q92915 247 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 GAL3ST3Q96A11 431 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 C18orf25Q96B23 403 aaPredicted RBP6.81□□□□□ -1.32
NUP88-212ENST00000576708 ACO2Q99798 780 aaKnown RBP6.81□□□□□ -1.32
NUP88-212ENST00000576708 CEP41Q9BYV8 373 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 RHOBTB2Q9BYZ6 727 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 PTPRHQ9HD43 1115 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 TPSG1Q9NRR2 321 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 WNT16Q9UBV4 365 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 DPP7Q9UHL4 492 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 TNFSF13BQ9Y275 285 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 CDY1Q9Y6F8 540 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 ZMYM2Q9UBW7 1377 aa6.81□□□□□ -1.32
NUP88-212ENST00000576708 PRR23AA6NEV1 266 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 PROB1E7EW31 1015 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 ABLIM1O14639 778 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 TIAF1O95411 115 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 C1RP00736 705 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 SLFN14P0C7P3 912 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 SRFP11831 508 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 GLULP15104 373 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 MUTP22033 750 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 NBL1P41271 181 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 EFNA5P52803 228 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 ARPP19P56211 112 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 GPC5P78333 572 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 SPAG1Q07617 926 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 CAMK2GQ13555 558 aaPredicted RBP6.8□□□□□ -1.32
NUP88-212ENST00000576708 RAB33AQ14088 237 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 ANGPT1Q15389 498 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 UPP1Q16831 310 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 XKR4Q5GH76 650 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 AXDND1Q5T1B0 1012 aaPredicted RBP6.8□□□□□ -1.32
NUP88-212ENST00000576708 KRT79Q5XKE5 535 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 ALKAL1Q6UXT8 129 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 GPR65Q8IYL9 337 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 C2CD4AQ8NCU7 369 aaPredicted RBP6.8□□□□□ -1.32
NUP88-212ENST00000576708 FGF13Q92913 245 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 UTP4Q969X6 686 aaKnown RBP6.8□□□□□ -1.32
NUP88-212ENST00000576708 TP53INP1Q96A56 240 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 MCRS1Q96EZ8 462 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 RHOVQ96L33 236 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 SNX27Q96L92 541 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 SPOCK3Q9BQ16 436 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 KXD1Q9BQD3 176 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 TCHPQ9BT92 498 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 SSBP4Q9BWG4 385 aaPredicted RBP6.8□□□□□ -1.32
NUP88-212ENST00000576708 FOXQ1Q9C009 403 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 IRF2BPLQ9H1B7 796 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 MIR1-1HGQ9H1L0 117 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 TBC1D17Q9HA65 648 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 KMT5AQ9NQR1 393 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 METTL5Q9NRN9 209 aaKnown RBP6.8□□□□□ -1.32
NUP88-212ENST00000576708 CACNA2D2Q9NY47 1150 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.8□□□□□ -1.32
NUP88-212ENST00000576708 ARHGAP28Q9P2N2 729 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 DNMT3BQ9UBC3 853 aaKnown RBP6.8□□□□□ -1.32
NUP88-212ENST00000576708 MTRRQ9UBK8 725 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 CDH7Q9ULB5 785 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 DNM3Q9UQ16 869 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 PIEZO1Q92508 2521 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 VWA8A3KMH1 1905 aa6.8□□□□□ -1.32
NUP88-212ENST00000576708 MTCL1Q9Y4B5 1905 aaKnown RBP6.8□□□□□ -1.32
NUP88-212ENST00000576708 DOCK6Q96HP0 2047 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 PHLPP2Q6ZVD8 1323 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 USP34Q70CQ2 3546 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 VWA3AA6NCI4 1184 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 TMEM189-UBE2V1I3L0A0 370 aa6.79□□□□□ -1.32
NUP88-212ENST00000576708 PODXLO00592 558 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms