RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, human

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC12A4-215	ENST00000575857	NOL4	O94818	638 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	CCDC130	P13994	396 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	HMGA1	P17096	107 aa	Known RBP	11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	CDK11B	P21127	795 aa	Known RBP	11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	BDNF	P23560	247 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	ALDH1A3	P47895	512 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	KLK7	P49862	253 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	YWHAE	P62258	255 aa	Known RBP	11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	CYP27A1	Q02318	531 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	DDR2	Q16832	855 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	ZNF394	Q53GI3	561 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	PRSS36	Q5K4E3	855 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	KLHDC7A	Q5VTJ3	777 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	ARHGAP17	Q68EM7	881 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	SMYD5	Q6GMV2	418 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	POTEH	Q6S545	545 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	ENOSF1	Q7L5Y1	443 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	HS6ST3	Q8IZP7	471 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	ANKRD20A12P	Q8NF67	263 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	SLC2A14	Q8TDB8	520 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	SHC3	Q92529	594 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	EDA	Q92838	391 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	PSMG2	Q969U7	264 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	ERGIC2	Q96RQ1	377 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	HNRNPAB	Q99729	332 aa	Known RBP	11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	NAA15	Q9BXJ9	866 aa	Known RBP	11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	GPR88	Q9GZN0	384 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	GAN	Q9H2C0	597 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	PLCB1	Q9NQ66	1216 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	RTN4	Q9NQC3	1192 aa	Known RBP	11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	FAM49B	Q9NUQ9	324 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	ASB3	Q9Y575	518 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	NOTCH4	Q99466	2003 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	CLUH	O75153	1309 aa		11.51	□□□□□ -0.57
SLC12A4-215	ENST00000575857	C2orf16	Q68DN1	1984 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	DOCK6	Q96HP0	2047 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857		A0A1B0GTH6	734 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	LOC730098	B7Z3J9	87 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	PES1	O00541	588 aa	Known RBP	11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	EPHB6	O15197	1021 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	TEX33	O43247	280 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	MOSPD3	O75425	235 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	RHO	P08100	348 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	PAEP	P09466	180 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	PTPN2	P17706	415 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	SP100	P23497	879 aa	Predicted RBP	11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	CCR2	P41597	374 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	EPHB3	P54753	998 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	RPL10A	P62906	217 aa	Known RBP	11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	SYCP1	Q15431	976 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	SLC5A9	Q2M3M2	681 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	FKBP15	Q5T1M5	1219 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	SDHAF4	Q5VUM1	108 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	IQCE	Q6IPM2	695 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	TMEM270	Q6UE05	265 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	TRIM67	Q6ZTA4	783 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	ZMIZ2	Q8NF64	920 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	GIPC2	Q8TF65	315 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	CYFIP2	Q96F07	1278 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	RPGRIP1	Q96KN7	1286 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	SPATA17	Q96L03	361 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	C8orf48	Q96LL4	319 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	FAM81B	Q96LP2	452 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	CEP295NL	Q96MC4	621 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	SMO	Q99835	787 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	ZSWIM1	Q9BR11	485 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	PHF7	Q9BWX1	381 aa	Predicted RBP	11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	LSM14B	Q9BX40	385 aa	Known RBP	11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	PIDD1	Q9HB75	910 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	IL21	Q9HBE4	155 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	CSNK1G1	Q9HCP0	422 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	ZNF334	Q9HCZ1	680 aa	Predicted RBP	11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	DNAJC12	Q9UKB3	198 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	PCDHB4	Q9Y5E5	795 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	DENND4A	Q7Z401	1863 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	PTPRD	P23468	1912 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	PIEZO1	Q92508	2521 aa		11.5	□□□□□ -0.57
SLC12A4-215	ENST00000575857	SLC38A8	A6NNN8	435 aa		11.49	□□□□□ -0.57
SLC12A4-215	ENST00000575857		F8VP50	259 aa		11.49	□□□□□ -0.57
SLC12A4-215	ENST00000575857	BEST1	O76090	585 aa		11.49	□□□□□ -0.57
SLC12A4-215	ENST00000575857	TPM2	P07951	284 aa		11.49	□□□□□ -0.57
SLC12A4-215	ENST00000575857	UCHL3	P15374	230 aa		11.49	□□□□□ -0.57
SLC12A4-215	ENST00000575857	VCP	P55072	806 aa	Known RBP	11.49	□□□□□ -0.57
SLC12A4-215	ENST00000575857	MFAP3	P55082	362 aa		11.49	□□□□□ -0.57
SLC12A4-215	ENST00000575857	ZXDA	P98168	799 aa		11.49	□□□□□ -0.57
SLC12A4-215	ENST00000575857	FANCC	Q00597	558 aa		11.49	□□□□□ -0.57
SLC12A4-215	ENST00000575857	UBXN1	Q04323	297 aa		11.49	□□□□□ -0.57
SLC12A4-215	ENST00000575857	MTMR3	Q13615	1198 aa		11.49	□□□□□ -0.57
SLC12A4-215	ENST00000575857	NR1I3	Q14994	352 aa		11.49	□□□□□ -0.57
SLC12A4-215	ENST00000575857	PABPC1L	Q4VXU2	614 aa	Known RBP	11.49	□□□□□ -0.57
SLC12A4-215	ENST00000575857	SCN4B	Q8IWT1	228 aa		11.49	□□□□□ -0.57
SLC12A4-215	ENST00000575857	RBBP8NL	Q8NC74	664 aa	Predicted RBP	11.49	□□□□□ -0.57
SLC12A4-215	ENST00000575857	STKLD1	Q8NE28	680 aa		11.49	□□□□□ -0.57
SLC12A4-215	ENST00000575857	ITFG1	Q8TB96	612 aa		11.49	□□□□□ -0.57
SLC12A4-215	ENST00000575857	GPR152	Q8TDT2	470 aa		11.49	□□□□□ -0.57
SLC12A4-215	ENST00000575857	TFAP2B	Q92481	460 aa		11.49	□□□□□ -0.57
SLC12A4-215	ENST00000575857	PBXIP1	Q96AQ6	731 aa		11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms