RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 DMAP1Q9NPF5 467 aaPredicted RBP10.15□□□□□ -0.78
CCDC40-214ENST00000575431 PLCB1Q9NQ66 1216 aa10.15□□□□□ -0.78
CCDC40-214ENST00000575431 COMMD8Q9NX08 183 aa10.15□□□□□ -0.78
CCDC40-214ENST00000575431 GDE1Q9NZC3 331 aa10.15□□□□□ -0.78
CCDC40-214ENST00000575431 HMGXB4Q9UGU5 601 aa10.15□□□□□ -0.78
CCDC40-214ENST00000575431 PCDHB4Q9Y5E5 795 aa10.15□□□□□ -0.78
CCDC40-214ENST00000575431 C2orf16Q68DN1 1984 aa10.15□□□□□ -0.78
CCDC40-214ENST00000575431 PTPRDP23468 1912 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 SLC38A8A6NNN8 435 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 LOC730098B7Z3J9 87 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 F8VP50 259 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 RTN3O95197 1032 aaPredicted RBP10.14□□□□□ -0.79
CCDC40-214ENST00000575431 SERPINC1P01008 464 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 FAM200BP0CF97 657 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 MYL4P12829 197 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 CD19P15391 556 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 ACO1P21399 889 aaKnown RBP10.14□□□□□ -0.79
CCDC40-214ENST00000575431 GBP2P32456 591 aaPredicted RBP10.14□□□□□ -0.79
CCDC40-214ENST00000575431 BPIFB4P59827 614 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 ZNF445P59923 1031 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 UBXN1Q04323 297 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 KCNMA1Q12791 1236 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 DDR2Q16832 855 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 SGO2Q562F6 1265 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 PAQR9Q6ZVX9 377 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 GJD3Q8N144 294 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 NUP93Q8N1F7 819 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 C12orf29Q8N999 325 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 SLC4A11Q8NBS3 891 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 RBBP8NLQ8NC74 664 aaPredicted RBP10.14□□□□□ -0.79
CCDC40-214ENST00000575431 RPGRIP1Q96KN7 1286 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 GCNAQ96QF7 691 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 ERGIC2Q96RQ1 377 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 LRRC3Q9BY71 257 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 DUSP16Q9BY84 665 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 UBXN6Q9BZV1 441 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 ZNF518BQ9C0D4 1074 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 FAM49BQ9NUQ9 324 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 HCFC1R1Q9NWW0 138 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 HESX1Q9UBX0 185 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 DNAJC12Q9UKB3 198 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 CDH7Q9ULB5 785 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 CDH23Q9H251 3354 aa10.14□□□□□ -0.79
CCDC40-214ENST00000575431 CLDN5O00501 218 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 MED7O43513 233 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 AP1G2O75843 785 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 SOAT2O75908 522 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 LAMP2P13473 410 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 KRT5P13647 590 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 CCDC130P13994 396 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 UCHL3P15374 230 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 HMGA1P17096 107 aaKnown RBP10.13□□□□□ -0.79
CCDC40-214ENST00000575431 NPR3P17342 541 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 PFKLP17858 780 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 DDX6P26196 483 aaKnown RBP eCLIP10.13□□□□□ -0.79
CCDC40-214ENST00000575431 GABRR2P28476 465 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 ZNF132P52740 706 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 PTK2Q05397 1052 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 ORC1Q13415 861 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 CNGA2Q16280 664 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 MEA1Q16626 185 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 ARHGAP15Q53QZ3 475 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 PRSS36Q5K4E3 855 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 PPP1R26Q5T8A7 1209 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-214ENST00000575431 KLHDC7AQ5VTJ3 777 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 GET4Q7L5D6 327 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-214ENST00000575431 LUZP1Q86V48 1076 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 FMNL3Q8IVF7 1028 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 ANKRD52Q8NB46 1076 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 PDZD8Q8NEN9 1154 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 GIPC2Q8TF65 315 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 SHC3Q92529 594 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 FGF13Q92913 245 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 E2F7Q96AV8 911 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 PCMTD1Q96MG8 357 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-214ENST00000575431 KREMEN1Q96MU8 473 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 UHRF1Q96T88 793 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-214ENST00000575431 LPIN3Q9BQK8 851 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 ATXN3LQ9H3M9 355 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 FBXO44Q9H4M3 255 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 SIX2Q9NPC8 291 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 RTN4Q9NQC3 1192 aaKnown RBP10.13□□□□□ -0.79
CCDC40-214ENST00000575431 KRT82Q9NSB4 513 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 IGSF9Q9P2J2 1179 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 EPS15L1Q9UBC2 864 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 CDH22Q9UJ99 828 aa10.13□□□□□ -0.79
CCDC40-214ENST00000575431 BRWD1Q9NSI6 2320 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 NCANO14594 1321 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 A0A1W2PQC6 194 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 F11P03951 625 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 TPM3P06753 285 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 SETSIPP0DME0 302 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 ATP1A3P13637 1013 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 ADORA2BP29275 332 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 SSTR3P32745 418 aaPredicted RBP10.12□□□□□ -0.79
CCDC40-214ENST00000575431 GPR15P49685 360 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 PDE6CP51160 858 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 BCAT1P54687 386 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 NTHL1P78549 312 aa10.12□□□□□ -0.79
CCDC40-214ENST00000575431 SYCP1Q15431 976 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms