RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 SCN4BQ8IWT1 228 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 CCDC65Q8IXS2 484 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 TTC16Q8NEE8 873 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 CD101Q93033 1021 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 ACDQ96AP0 544 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 FAM84AQ96KN4 292 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 HHIPQ96QV1 700 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 SYT15Q9BQS2 421 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 FGFBP2Q9BYJ0 223 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 ARRDC1-AS1Q9H2J1 176 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 PCIF1Q9H4Z3 704 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 ECT2Q9H8V3 914 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 INTS13Q9NVM9 706 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 DUS2Q9NX74 493 aaKnown RBP11.19□□□□□ -0.62
TVP23B-208ENST00000575261 PCDHGA5Q9Y5G8 931 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 MAP1BP46821 2468 aaKnown RBP11.19□□□□□ -0.62
TVP23B-208ENST00000575261 CNOT1A5YKK6 2376 aaKnown RBP11.19□□□□□ -0.62
TVP23B-208ENST00000575261 EML5Q05BV3 1969 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 ANAPC1Q9H1A4 1944 aa11.19□□□□□ -0.62
TVP23B-208ENST00000575261 CFAP47Q6ZTR5 3102 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 PTPRJQ12913 1337 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 PTPRDP23468 1912 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 A0A087X0B3 334 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 ZNF233A6NK53 670 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 AXIN1O15169 862 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 HCRTO43612 131 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 PRPF6O94906 941 aaKnown RBP11.18□□□□□ -0.62
TVP23B-208ENST00000575261 ZNF806P0C7X5 589 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 SYT1P21579 422 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 GALK1P51570 392 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 PSMC1P62191 440 aaKnown RBP11.18□□□□□ -0.62
TVP23B-208ENST00000575261 SF3A2Q15428 464 aaKnown RBP11.18□□□□□ -0.62
TVP23B-208ENST00000575261 SURF1Q15526 300 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 SOWAHAQ2M3V2 549 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 EML3Q32P44 896 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 LMBRD2Q68DH5 695 aaPredicted RBP11.18□□□□□ -0.62
TVP23B-208ENST00000575261 FAM171BQ6P995 826 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 VSTM1Q6UX27 236 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 SYT13Q7L8C5 426 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 RPLP0P6Q8NHW5 317 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 CCDC26Q8TAB7 109 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 SH3RF2Q8TEC5 729 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 KBTBD7Q8WVZ9 684 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 MYLPFQ96A32 169 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 HPDLQ96IR7 371 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 CEP295NLQ96MC4 621 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 USP28Q96RU2 1077 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 SLC22A12Q96S37 553 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 TNMDQ9H2S6 317 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 FBRSL1Q9HCM7 1045 aaKnown RBP11.18□□□□□ -0.62
TVP23B-208ENST00000575261 CDH9Q9ULB4 789 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 ARHGAP26Q9UNA1 814 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 WNT6Q9Y6F9 365 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 ATG2BQ96BY7 2078 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 USP24Q9UPU5 2620 aa11.18□□□□□ -0.62
TVP23B-208ENST00000575261 SDK1Q7Z5N4 2213 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 FRYQ5TBA9 3013 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 C2orf78A6NCI8 922 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 NFATC1O95644 943 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 APBB3O95704 486 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 TCF3P15923 654 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 PFKLP17858 780 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 ANXA13P27216 316 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 MPLP40238 635 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 NR1H3Q13133 447 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 SLC39A14Q15043 492 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 ELF2Q15723 593 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 CCDC6Q16204 474 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 DUOXA2Q1HG44 320 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 PLA2G2CQ5R387 149 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 NAIF1Q69YI7 327 aaPredicted RBP11.17□□□□□ -0.62
TVP23B-208ENST00000575261 SCARA3Q6AZY7 606 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 DENND5BQ6ZUT9 1274 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 CBWD2Q8IUF1 395 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 WDR49Q8IV35 697 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 PDILTQ8N807 584 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 ARL14EPQ8N8R7 260 aaPredicted RBP11.17□□□□□ -0.62
TVP23B-208ENST00000575261 OR5B17Q8NGF7 314 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 ZC3H10Q96K80 434 aaKnown RBP11.17□□□□□ -0.62
TVP23B-208ENST00000575261 SPATA17Q96L03 361 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 CYP2S1Q96SQ9 504 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 PANK2Q9BZ23 570 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 LRRC27Q9C0I9 530 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 KIAA1586Q9HCI6 787 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 HSPBP1Q9NZL4 362 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 EHD2Q9NZN4 543 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 GCNT4Q9P109 453 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 MAGEC2Q9UBF1 373 aaPredicted RBP11.17□□□□□ -0.62
TVP23B-208ENST00000575261 ASPMQ8IZT6 3477 aa11.17□□□□□ -0.62
TVP23B-208ENST00000575261 TRIM66O15016 1216 aa11.16□□□□□ -0.62
TVP23B-208ENST00000575261 EIF3DO15371 548 aaKnown RBP eCLIP11.16□□□□□ -0.62
TVP23B-208ENST00000575261 ATP2C2O75185 946 aa11.16□□□□□ -0.62
TVP23B-208ENST00000575261 HDCP19113 662 aa11.16□□□□□ -0.62
TVP23B-208ENST00000575261 WARSP23381 471 aaKnown RBP11.16□□□□□ -0.62
TVP23B-208ENST00000575261 BDNFP23560 247 aa11.16□□□□□ -0.62
TVP23B-208ENST00000575261 LMO2P25791 158 aa11.16□□□□□ -0.62
TVP23B-208ENST00000575261 GRIK1P39086 918 aa11.16□□□□□ -0.62
TVP23B-208ENST00000575261 NASPP49321 788 aaPredicted RBP11.16□□□□□ -0.62
TVP23B-208ENST00000575261 CYP27A1Q02318 531 aa11.16□□□□□ -0.62
TVP23B-208ENST00000575261 PSMD2Q13200 908 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms