RNA–Protein interactions for RNA: ENST00000575194.5

SPNS3-204, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 1 (best)

Gene SPNS3, Length 1,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-204ENST00000575194 HEMGNQ9BXL5 484 aa19.71■□□□□ 0.75
SPNS3-204ENST00000575194 NFS1Q9Y697 457 aa19.71■□□□□ 0.75
SPNS3-204ENST00000575194 GRIN2DO15399 1336 aa19.7■□□□□ 0.74
SPNS3-204ENST00000575194 TREHO43280 583 aa19.7■□□□□ 0.74
SPNS3-204ENST00000575194 CABYRO75952 493 aa19.7■□□□□ 0.74
SPNS3-204ENST00000575194 ERBB2P04626 1255 aa19.7■□□□□ 0.74
SPNS3-204ENST00000575194 SETSIPP0DME0 302 aa19.7■□□□□ 0.74
SPNS3-204ENST00000575194 PNPLA4P41247 253 aa19.7■□□□□ 0.74
SPNS3-204ENST00000575194 HIC1Q14526 733 aa19.7■□□□□ 0.74
SPNS3-204ENST00000575194 NBPF20Q3BBV1 942 aa19.7■□□□□ 0.74
SPNS3-204ENST00000575194 ALKAL1Q6UXT8 129 aa19.7■□□□□ 0.74
SPNS3-204ENST00000575194 SPOCD1Q6ZMY3 1216 aa19.7■□□□□ 0.74
SPNS3-204ENST00000575194 CROCCP2Q86T23 111 aa19.7■□□□□ 0.74
SPNS3-204ENST00000575194 UNC93AQ86WB7 457 aa19.7■□□□□ 0.74
SPNS3-204ENST00000575194 CCHCR1Q8TD31 782 aa19.7■□□□□ 0.74
SPNS3-204ENST00000575194 PPP1R13LQ8WUF5 828 aa19.7■□□□□ 0.74
SPNS3-204ENST00000575194 ATG4AQ8WYN0 398 aa19.7■□□□□ 0.74
SPNS3-204ENST00000575194 RNF25Q96BH1 459 aaPredicted RBP19.7■□□□□ 0.74
SPNS3-204ENST00000575194 MCOLN1Q9GZU1 580 aa19.7■□□□□ 0.74
SPNS3-204ENST00000575194 PABPC3Q9H361 631 aaKnown RBP19.7■□□□□ 0.74
SPNS3-204ENST00000575194 NXF3Q9H4D5 531 aaKnown RBP19.7■□□□□ 0.74
SPNS3-204ENST00000575194 METTL5Q9NRN9 209 aaKnown RBP19.7■□□□□ 0.74
SPNS3-204ENST00000575194 PHF24Q9UPV7 400 aa19.7■□□□□ 0.74
SPNS3-204ENST00000575194 DNM1LO00429 736 aa19.69■□□□□ 0.74
SPNS3-204ENST00000575194 ATF2P15336 505 aa19.69■□□□□ 0.74
SPNS3-204ENST00000575194 RFC1P35251 1148 aaPredicted RBP19.69■□□□□ 0.74
SPNS3-204ENST00000575194 GPD2P43304 727 aa19.69■□□□□ 0.74
SPNS3-204ENST00000575194 ZNF844Q08AG5 666 aa19.69■□□□□ 0.74
SPNS3-204ENST00000575194 IFFO1Q0D2I5 559 aa19.69■□□□□ 0.74
SPNS3-204ENST00000575194 TFDP3Q5H9I0 405 aa19.69■□□□□ 0.74
SPNS3-204ENST00000575194 AGBL2Q5U5Z8 902 aa19.69■□□□□ 0.74
SPNS3-204ENST00000575194 DENND2CQ68D51 928 aa19.69■□□□□ 0.74
SPNS3-204ENST00000575194 DRICH1Q6PGQ1 229 aaPredicted RBP19.69■□□□□ 0.74
SPNS3-204ENST00000575194 ZNF365Q70YC5 407 aa19.69■□□□□ 0.74
SPNS3-204ENST00000575194 HOOK3Q86VS8 718 aa19.69■□□□□ 0.74
SPNS3-204ENST00000575194 TMEM130Q8N3G9 435 aa19.69■□□□□ 0.74
SPNS3-204ENST00000575194 HERPUD2Q9BSE4 406 aa19.69■□□□□ 0.74
SPNS3-204ENST00000575194 TUBGCP4Q9UGJ1 667 aa19.69■□□□□ 0.74
SPNS3-204ENST00000575194 EFR3BQ9Y2G0 817 aa19.69■□□□□ 0.74
SPNS3-204ENST00000575194 M0QZ92 97 aa19.68■□□□□ 0.74
SPNS3-204ENST00000575194 SHOX2O60902 331 aaPredicted RBP19.68■□□□□ 0.74
SPNS3-204ENST00000575194 NUDT17P0C025 328 aa19.68■□□□□ 0.74
SPNS3-204ENST00000575194 KCNE1P15382 129 aa19.68■□□□□ 0.74
SPNS3-204ENST00000575194 SKOR1P84550 965 aa19.68■□□□□ 0.74
SPNS3-204ENST00000575194 LLGL1Q15334 1064 aa19.68■□□□□ 0.74
SPNS3-204ENST00000575194 CCDC89Q8N998 374 aa19.68■□□□□ 0.74
SPNS3-204ENST00000575194 ZMAT2Q96NC0 199 aaKnown RBP19.68■□□□□ 0.74
SPNS3-204ENST00000575194 FRMD8P1Q9BZ68 369 aaPredicted RBP19.68■□□□□ 0.74
SPNS3-204ENST00000575194 TSPAN16Q9UKR8 245 aa19.68■□□□□ 0.74
SPNS3-204ENST00000575194 R3HDM2Q9Y2K5 976 aaKnown RBP19.68■□□□□ 0.74
SPNS3-204ENST00000575194 SNX9Q9Y5X1 595 aa19.68■□□□□ 0.74
SPNS3-204ENST00000575194 TRIP11Q15643 1979 aa19.68■□□□□ 0.74
SPNS3-204ENST00000575194 NDC80O14777 642 aa19.68■□□□□ 0.74
SPNS3-204ENST00000575194 ACTN2P35609 894 aa19.68■□□□□ 0.74
SPNS3-204ENST00000575194 GOLGA7BQ2TAP0 167 aa19.68■□□□□ 0.74
SPNS3-204ENST00000575194 C9orf57Q5W0N0 161 aa19.68■□□□□ 0.74
SPNS3-204ENST00000575194 KDM7AQ6ZMT4 941 aa19.68■□□□□ 0.74
SPNS3-204ENST00000575194 CEP128Q6ZU80 1094 aa19.68■□□□□ 0.74
SPNS3-204ENST00000575194 SESTD1Q86VW0 696 aa19.68■□□□□ 0.74
SPNS3-204ENST00000575194 APOL6Q9BWW8 343 aa19.68■□□□□ 0.74
SPNS3-204ENST00000575194 KLHL11Q9NVR0 708 aa19.68■□□□□ 0.74
SPNS3-204ENST00000575194 ASNSD1Q9NWL6 643 aa19.68■□□□□ 0.74
SPNS3-204ENST00000575194 HESX1Q9UBX0 185 aa19.68■□□□□ 0.74
SPNS3-204ENST00000575194 hCG_1818297A0A087WSY0 165 aa19.67■□□□□ 0.74
SPNS3-204ENST00000575194 LRRD1A4D1F6 860 aa19.67■□□□□ 0.74
SPNS3-204ENST00000575194 RPS6KA5O75582 802 aa19.67■□□□□ 0.74
SPNS3-204ENST00000575194 CAPN15O75808 1086 aa19.67■□□□□ 0.74
SPNS3-204ENST00000575194 RNF8O76064 485 aa19.67■□□□□ 0.74
SPNS3-204ENST00000575194 RPLP2P05387 115 aaKnown RBP19.67■□□□□ 0.74
SPNS3-204ENST00000575194 RARGP13631 454 aa19.67■□□□□ 0.74
SPNS3-204ENST00000575194 DESP17661 470 aa19.67■□□□□ 0.74
SPNS3-204ENST00000575194 CYP3A5P20815 502 aa19.67■□□□□ 0.74
SPNS3-204ENST00000575194 GJA8P48165 433 aa19.67■□□□□ 0.74
SPNS3-204ENST00000575194 MNX1P50219 401 aaPredicted RBP19.67■□□□□ 0.74
SPNS3-204ENST00000575194 SLC25A11Q02978 314 aaKnown RBP19.67■□□□□ 0.74
SPNS3-204ENST00000575194 XKR4Q5GH76 650 aa19.67■□□□□ 0.74
SPNS3-204ENST00000575194 FAM102AQ5T9C2 384 aaPredicted RBP19.67■□□□□ 0.74
SPNS3-204ENST00000575194 EMC10Q5UCC4 262 aa19.67■□□□□ 0.74
SPNS3-204ENST00000575194 MFSD7Q6UXD7 560 aa19.67■□□□□ 0.74
SPNS3-204ENST00000575194 DPH6Q7L8W6 267 aa19.67■□□□□ 0.74
SPNS3-204ENST00000575194 RSPH3Q86UC2 560 aa19.67■□□□□ 0.74
SPNS3-204ENST00000575194 ARFGAP2Q8N6H7 521 aa19.67■□□□□ 0.74
SPNS3-204ENST00000575194 JOSD2Q8TAC2 188 aa19.67■□□□□ 0.74
SPNS3-204ENST00000575194 GLT1D1Q96MS3 346 aa19.67■□□□□ 0.74
SPNS3-204ENST00000575194 CAPS2Q9BXY5 557 aa19.67■□□□□ 0.74
SPNS3-204ENST00000575194 A0A1W2PQ45 241 aaPredicted RBP19.66■□□□□ 0.74
SPNS3-204ENST00000575194 A0A1W2PQY0 241 aa19.66■□□□□ 0.74
SPNS3-204ENST00000575194 ERICH4A6NGS2 130 aa19.66■□□□□ 0.74
SPNS3-204ENST00000575194 KBTBD13C9JR72 458 aa19.66■□□□□ 0.74
SPNS3-204ENST00000575194 PI4K2BG5E9Z4 385 aa19.66■□□□□ 0.74
SPNS3-204ENST00000575194 LRCH4O75427 683 aa19.66■□□□□ 0.74
SPNS3-204ENST00000575194 TCF4P15884 667 aa19.66■□□□□ 0.74
SPNS3-204ENST00000575194 NR1D1P20393 614 aa19.66■□□□□ 0.74
SPNS3-204ENST00000575194 ITGA7Q13683 1181 aa19.66■□□□□ 0.74
SPNS3-204ENST00000575194 FBXO47Q5MNV8 452 aa19.66■□□□□ 0.74
SPNS3-204ENST00000575194 TRMT10CQ7L0Y3 403 aaKnown RBP19.66■□□□□ 0.74
SPNS3-204ENST00000575194 UBA3Q8TBC4 463 aa19.66■□□□□ 0.74
SPNS3-204ENST00000575194 TMEM40Q8WWA1 233 aa19.66■□□□□ 0.74
SPNS3-204ENST00000575194 C18orf25Q96B23 403 aaPredicted RBP19.66■□□□□ 0.74
SPNS3-204ENST00000575194 MRPL45Q9BRJ2 306 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms