RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 CYP11B1P15538 503 aa18.11■□□□□ 0.49
NUP88-210ENST00000574867 CYP2F1P24903 491 aa18.11■□□□□ 0.49
NUP88-210ENST00000574867 SLC8A3P57103 927 aa18.11■□□□□ 0.49
NUP88-210ENST00000574867 GOLGA7BQ2TAP0 167 aa18.11■□□□□ 0.49
NUP88-210ENST00000574867 PPM1LQ5SGD2 360 aa18.11■□□□□ 0.49
NUP88-210ENST00000574867 ZNF677Q86XU0 584 aa18.11■□□□□ 0.49
NUP88-210ENST00000574867 CPLX3Q8WVH0 158 aa18.11■□□□□ 0.49
NUP88-210ENST00000574867 ZNF606Q8WXB4 792 aa18.11■□□□□ 0.49
NUP88-210ENST00000574867 RHOBTB2Q9BYZ6 727 aa18.11■□□□□ 0.49
NUP88-210ENST00000574867 DMAP1Q9NPF5 467 aaPredicted RBP18.11■□□□□ 0.49
NUP88-210ENST00000574867 AIPL1Q9NZN9 384 aa18.11■□□□□ 0.49
NUP88-210ENST00000574867 SLC27A5Q9Y2P5 690 aa18.11■□□□□ 0.49
NUP88-210ENST00000574867 AP1G2O75843 785 aa18.1■□□□□ 0.49
NUP88-210ENST00000574867 POU2F2P09086 479 aa18.1■□□□□ 0.49
NUP88-210ENST00000574867 HNRNPA1P09651 372 aaKnown RBP eCLIP18.1■□□□□ 0.49
NUP88-210ENST00000574867 NPR3P17342 541 aa18.1■□□□□ 0.49
NUP88-210ENST00000574867 ALDH1A3P47895 512 aa18.1■□□□□ 0.49
NUP88-210ENST00000574867 BCAT1P54687 386 aa18.1■□□□□ 0.49
NUP88-210ENST00000574867 TBX2Q13207 712 aaPredicted RBP18.1■□□□□ 0.49
NUP88-210ENST00000574867 ASIC2Q16515 512 aa18.1■□□□□ 0.49
NUP88-210ENST00000574867 CNGA4Q8IV77 575 aa18.1■□□□□ 0.49
NUP88-210ENST00000574867 ANKRD52Q8NB46 1076 aa18.1■□□□□ 0.49
NUP88-210ENST00000574867 EPS8L1Q8TE68 723 aa18.1■□□□□ 0.49
NUP88-210ENST00000574867 C8orf48Q96LL4 319 aa18.1■□□□□ 0.49
NUP88-210ENST00000574867 CSNK1G1Q9HCP0 422 aa18.1■□□□□ 0.49
NUP88-210ENST00000574867 ACP6Q9NPH0 428 aa18.1■□□□□ 0.49
NUP88-210ENST00000574867 PATJQ8NI35 1801 aa18.1■□□□□ 0.49
NUP88-210ENST00000574867 LINC01565O15544 149 aa18.1■□□□□ 0.49
NUP88-210ENST00000574867 LRG1P02750 347 aa18.1■□□□□ 0.49
NUP88-210ENST00000574867 HOXB8P17481 243 aaPredicted RBP18.1■□□□□ 0.49
NUP88-210ENST00000574867 ANXA13P27216 316 aa18.1■□□□□ 0.49
NUP88-210ENST00000574867 KRT9P35527 623 aa18.1■□□□□ 0.49
NUP88-210ENST00000574867 CDR1P51861 262 aa18.1■□□□□ 0.49
NUP88-210ENST00000574867 RBM10P98175 930 aaKnown RBP18.1■□□□□ 0.49
NUP88-210ENST00000574867 CMASQ8NFW8 434 aaPredicted RBP18.1■□□□□ 0.49
NUP88-210ENST00000574867 ZSWIM1Q9BR11 485 aa18.1■□□□□ 0.49
NUP88-210ENST00000574867 DUSP16Q9BY84 665 aa18.1■□□□□ 0.49
NUP88-210ENST00000574867 CLDND1Q9NY35 253 aa18.1■□□□□ 0.49
NUP88-210ENST00000574867 PCDHGC3Q9UN70 934 aa18.1■□□□□ 0.49
NUP88-210ENST00000574867 MFAP3LO75121 409 aa18.09■□□□□ 0.49
NUP88-210ENST00000574867 PAPLNO95428 1278 aa18.09■□□□□ 0.49
NUP88-210ENST00000574867 SETSIPP0DME0 302 aa18.09■□□□□ 0.49
NUP88-210ENST00000574867 GRIK1P39086 918 aa18.09■□□□□ 0.49
NUP88-210ENST00000574867 BST2Q10589 180 aaKnown RBP18.09■□□□□ 0.49
NUP88-210ENST00000574867 ARID5BQ14865 1188 aa18.09■□□□□ 0.49
NUP88-210ENST00000574867 VEPH1Q14D04 833 aa18.09■□□□□ 0.49
NUP88-210ENST00000574867 ANKRD54Q6NXT1 300 aa18.09■□□□□ 0.49
NUP88-210ENST00000574867 CLEC20AQ6ZU45 233 aa18.09■□□□□ 0.49
NUP88-210ENST00000574867 SCN4BQ8IWT1 228 aa18.09■□□□□ 0.49
NUP88-210ENST00000574867 PNPLA8Q9NP80 782 aa18.09■□□□□ 0.49
NUP88-210ENST00000574867 NOCTQ9UK39 431 aaKnown RBP18.09■□□□□ 0.49
NUP88-210ENST00000574867 MYH10P35580 1976 aa18.09■□□□□ 0.49
NUP88-210ENST00000574867 F8VP50 259 aa18.08■□□□□ 0.49
NUP88-210ENST00000574867 M0QYV0 167 aa18.08■□□□□ 0.49
NUP88-210ENST00000574867 MICAL2O94851 1124 aa18.08■□□□□ 0.49
NUP88-210ENST00000574867 CALCAP01258 141 aa18.08■□□□□ 0.49
NUP88-210ENST00000574867 ATF6P18850 670 aa18.08■□□□□ 0.49
NUP88-210ENST00000574867 PRKCIP41743 596 aa18.08■□□□□ 0.49
NUP88-210ENST00000574867 ARID5AQ03989 594 aa18.08■□□□□ 0.49
NUP88-210ENST00000574867 TWF1Q12792 350 aa18.08■□□□□ 0.49
NUP88-210ENST00000574867 NOP9Q86U38 636 aaKnown RBP18.08■□□□□ 0.49
NUP88-210ENST00000574867 TTC30AQ86WT1 665 aa18.08■□□□□ 0.49
NUP88-210ENST00000574867 DRC7Q8IY82 874 aa18.08■□□□□ 0.49
NUP88-210ENST00000574867 ELMOD1Q8N336 334 aa18.08■□□□□ 0.49
NUP88-210ENST00000574867 SPATA17Q96L03 361 aa18.08■□□□□ 0.49
NUP88-210ENST00000574867 DNAJC7Q99615 494 aa18.08■□□□□ 0.49
NUP88-210ENST00000574867 ASB3Q9Y575 518 aa18.08■□□□□ 0.49
NUP88-210ENST00000574867 AKR1B15C9JRZ8 316 aaPredicted RBP18.08■□□□□ 0.48
NUP88-210ENST00000574867 XYLBO75191 536 aa18.08■□□□□ 0.48
NUP88-210ENST00000574867 TBX10O75333 385 aa18.08■□□□□ 0.48
NUP88-210ENST00000574867 CACNA2D1P54289 1103 aa18.08■□□□□ 0.48
NUP88-210ENST00000574867 EPHB3P54753 998 aa18.08■□□□□ 0.48
NUP88-210ENST00000574867 CCDC85BQ15834 202 aaPredicted RBP18.08■□□□□ 0.48
NUP88-210ENST00000574867 PKDCCQ504Y2 493 aa18.08■□□□□ 0.48
NUP88-210ENST00000574867 IRF2BP2Q7Z5L9 587 aa18.08■□□□□ 0.48
NUP88-210ENST00000574867 DDX1Q92499 740 aaKnown RBP18.08■□□□□ 0.48
NUP88-210ENST00000574867 SMOQ99835 787 aa18.08■□□□□ 0.48
NUP88-210ENST00000574867 TMEM30AQ9NV96 361 aa18.08■□□□□ 0.48
NUP88-210ENST00000574867 IMPACTQ9P2X3 320 aa18.08■□□□□ 0.48
NUP88-210ENST00000574867 CEP83Q9Y592 693 aa18.08■□□□□ 0.48
NUP88-210ENST00000574867 GOLGA6L6A8MZA4 724 aa18.07■□□□□ 0.48
NUP88-210ENST00000574867 RFPL2O75678 378 aa18.07■□□□□ 0.48
NUP88-210ENST00000574867 SOAT2O75908 522 aa18.07■□□□□ 0.48
NUP88-210ENST00000574867 HNRNPH3P31942 346 aaKnown RBP18.07■□□□□ 0.48
NUP88-210ENST00000574867 MAP3K7CLP57077 242 aa18.07■□□□□ 0.48
NUP88-210ENST00000574867 CDR2Q01850 454 aa18.07■□□□□ 0.48
NUP88-210ENST00000574867 TSR1Q2NL82 804 aaKnown RBP18.07■□□□□ 0.48
NUP88-210ENST00000574867 E4F1Q66K89 784 aaPredicted RBP18.07■□□□□ 0.48
NUP88-210ENST00000574867 CYP26C1Q6V0L0 522 aa18.07■□□□□ 0.48
NUP88-210ENST00000574867 ITIH5Q86UX2 942 aa18.07■□□□□ 0.48
NUP88-210ENST00000574867 OR8K1Q8NGG5 319 aa18.07■□□□□ 0.48
NUP88-210ENST00000574867 CLEC1BQ9P126 229 aa18.07■□□□□ 0.48
NUP88-210ENST00000574867 BZW2Q9Y6E2 419 aaKnown RBP18.07■□□□□ 0.48
NUP88-210ENST00000574867 XPO1O14980 1071 aaKnown RBP18.07■□□□□ 0.48
NUP88-210ENST00000574867 SKIV2LQ15477 1246 aaKnown RBP18.07■□□□□ 0.48
NUP88-210ENST00000574867 DDR2Q16832 855 aa18.07■□□□□ 0.48
NUP88-210ENST00000574867 ZMIZ2Q8NF64 920 aa18.07■□□□□ 0.48
NUP88-210ENST00000574867 PRKD2Q9BZL6 878 aa18.07■□□□□ 0.48
NUP88-210ENST00000574867 UBXN6Q9BZV1 441 aa18.07■□□□□ 0.48
NUP88-210ENST00000574867 LHX5Q9H2C1 402 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms