RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 RIN3Q8TB24 985 aa22.6■■□□□ 1.21
CHRNB1-206ENST00000574054 MYRFLQ96LU7 910 aa22.6■■□□□ 1.21
CHRNB1-206ENST00000574054 CRTAC1Q9NQ79 661 aa22.6■■□□□ 1.21
CHRNB1-206ENST00000574054 GMEB2Q9UKD1 530 aa22.6■■□□□ 1.21
CHRNB1-206ENST00000574054 CFAP45Q9UL16 551 aa22.6■■□□□ 1.21
CHRNB1-206ENST00000574054 ZNF638Q14966 1978 aaKnown RBP22.59■■□□□ 1.21
CHRNB1-206ENST00000574054 TRAV19A0A0A6YYK7 116 aa22.59■■□□□ 1.21
CHRNB1-206ENST00000574054 PVALEFA0A1B0GWK0 134 aa22.59■■□□□ 1.21
CHRNB1-206ENST00000574054 GRIK1P39086 918 aa22.59■■□□□ 1.21
CHRNB1-206ENST00000574054 TNNC1P63316 161 aa22.59■■□□□ 1.21
CHRNB1-206ENST00000574054 DNM1Q05193 864 aaKnown RBP22.59■■□□□ 1.21
CHRNB1-206ENST00000574054 DMWDQ09019 674 aa22.59■■□□□ 1.21
CHRNB1-206ENST00000574054 ZNF268Q14587 947 aaPredicted RBP22.59■■□□□ 1.21
CHRNB1-206ENST00000574054 ATL3Q6DD88 541 aa22.59■■□□□ 1.21
CHRNB1-206ENST00000574054 FSIP1Q8NA03 581 aa22.59■■□□□ 1.21
CHRNB1-206ENST00000574054 CYP2S1Q96SQ9 504 aa22.59■■□□□ 1.21
CHRNB1-206ENST00000574054 MRPL45Q9BRJ2 306 aaKnown RBP22.59■■□□□ 1.21
CHRNB1-206ENST00000574054 DENND4CQ5VZ89 1909 aa22.59■■□□□ 1.21
CHRNB1-206ENST00000574054 CLSTN1O94985 981 aa22.58■■□□□ 1.21
CHRNB1-206ENST00000574054 CST3P01034 146 aaPredicted RBP22.58■■□□□ 1.21
CHRNB1-206ENST00000574054 USP17L7P0C7H9 530 aa22.58■■□□□ 1.21
CHRNB1-206ENST00000574054 ANXA13P27216 316 aa22.58■■□□□ 1.21
CHRNB1-206ENST00000574054 GNL1P36915 607 aaPredicted RBP22.58■■□□□ 1.21
CHRNB1-206ENST00000574054 GRSF1Q12849 480 aaKnown RBP eCLIP22.58■■□□□ 1.21
CHRNB1-206ENST00000574054 TRPC3Q13507 836 aa22.58■■□□□ 1.21
CHRNB1-206ENST00000574054 MTF1Q14872 753 aa22.58■■□□□ 1.21
CHRNB1-206ENST00000574054 MDH1BQ5I0G3 518 aa22.58■■□□□ 1.21
CHRNB1-206ENST00000574054 VSTM1Q6UX27 236 aa22.58■■□□□ 1.21
CHRNB1-206ENST00000574054 SYNPOQ8N3V7 929 aa22.58■■□□□ 1.21
CHRNB1-206ENST00000574054 OR6B3Q8NGW1 331 aa22.58■■□□□ 1.21
CHRNB1-206ENST00000574054 SLC22A12Q96S37 553 aa22.58■■□□□ 1.21
CHRNB1-206ENST00000574054 C2orf42Q9NWW7 574 aa22.58■■□□□ 1.21
CHRNB1-206ENST00000574054 CGNQ9P2M7 1197 aaKnown RBP22.58■■□□□ 1.21
CHRNB1-206ENST00000574054 SERTAD1Q9UHV2 236 aa22.58■■□□□ 1.21
CHRNB1-206ENST00000574054 USP18Q9UMW8 372 aa22.58■■□□□ 1.21
CHRNB1-206ENST00000574054 KIF26AQ9ULI4 1882 aaPredicted RBP22.58■■□□□ 1.2
CHRNB1-206ENST00000574054 C2orf78A6NCI8 922 aa22.57■■□□□ 1.2
CHRNB1-206ENST00000574054 OTOL1A6NHN0 477 aaPredicted RBP22.57■■□□□ 1.2
CHRNB1-206ENST00000574054 K7ESF4 209 aa22.57■■□□□ 1.2
CHRNB1-206ENST00000574054 EXOC3O60645 756 aa22.57■■□□□ 1.2
CHRNB1-206ENST00000574054 PHACTR2O75167 634 aa22.57■■□□□ 1.2
CHRNB1-206ENST00000574054 PAPSS2O95340 614 aaPredicted RBP22.57■■□□□ 1.2
CHRNB1-206ENST00000574054 FAM160A1Q05DH4 1040 aa22.57■■□□□ 1.2
CHRNB1-206ENST00000574054 KCNB1Q14721 858 aa22.57■■□□□ 1.2
CHRNB1-206ENST00000574054 PDGFRLQ15198 375 aa22.57■■□□□ 1.2
CHRNB1-206ENST00000574054 KNOP1Q1ED39 458 aaKnown RBP22.57■■□□□ 1.2
CHRNB1-206ENST00000574054 BMT2Q1RMZ1 405 aa22.57■■□□□ 1.2
CHRNB1-206ENST00000574054 WDR72Q3MJ13 1102 aa22.57■■□□□ 1.2
CHRNB1-206ENST00000574054 DGLUCYQ7Z3D6 616 aa22.57■■□□□ 1.2
CHRNB1-206ENST00000574054 GPR161Q8N6U8 529 aaKnown RBP22.57■■□□□ 1.2
CHRNB1-206ENST00000574054 ARL14EPQ8N8R7 260 aaPredicted RBP22.57■■□□□ 1.2
CHRNB1-206ENST00000574054 EXOC1Q9NV70 894 aa22.57■■□□□ 1.2
CHRNB1-206ENST00000574054 DUS2Q9NX74 493 aaKnown RBP22.57■■□□□ 1.2
CHRNB1-206ENST00000574054 OBSL1O75147 1896 aa22.57■■□□□ 1.2
CHRNB1-206ENST00000574054 MYL6P60660 151 aa22.56■■□□□ 1.2
CHRNB1-206ENST00000574054 AMPD2Q01433 879 aa22.56■■□□□ 1.2
CHRNB1-206ENST00000574054 SRSF5Q13243 272 aaKnown RBP22.56■■□□□ 1.2
CHRNB1-206ENST00000574054 SIM2Q14190 667 aaPredicted RBP22.56■■□□□ 1.2
CHRNB1-206ENST00000574054 PUM1Q14671 1186 aaKnown RBP eCLIP22.56■■□□□ 1.2
CHRNB1-206ENST00000574054 RSPO4Q2I0M5 234 aaPredicted RBP22.56■■□□□ 1.2
CHRNB1-206ENST00000574054 TMEM196Q5HYL7 178 aa22.56■■□□□ 1.2
CHRNB1-206ENST00000574054 FSTL4Q6MZW2 842 aa22.56■■□□□ 1.2
CHRNB1-206ENST00000574054 LONP2Q86WA8 852 aa22.56■■□□□ 1.2
CHRNB1-206ENST00000574054 CPA6Q8N4T0 437 aa22.56■■□□□ 1.2
CHRNB1-206ENST00000574054 MYCBPAPQ8TBZ2 947 aa22.56■■□□□ 1.2
CHRNB1-206ENST00000574054 ZNF516Q92618 1163 aa22.56■■□□□ 1.2
CHRNB1-206ENST00000574054 PCED1BQ96HM7 432 aa22.56■■□□□ 1.2
CHRNB1-206ENST00000574054 SPATA17Q96L03 361 aa22.56■■□□□ 1.2
CHRNB1-206ENST00000574054 NXF1Q9UBU9 619 aaKnown RBP22.56■■□□□ 1.2
CHRNB1-206ENST00000574054 RCOR1Q9UKL0 485 aa22.56■■□□□ 1.2
CHRNB1-206ENST00000574054 TRIM66O15016 1216 aa22.55■■□□□ 1.2
CHRNB1-206ENST00000574054 TACC1O75410 805 aa22.55■■□□□ 1.2
CHRNB1-206ENST00000574054 SLFN14P0C7P3 912 aa22.55■■□□□ 1.2
CHRNB1-206ENST00000574054 IFNAR2P48551 515 aa22.55■■□□□ 1.2
CHRNB1-206ENST00000574054 CASP4P49662 377 aa22.55■■□□□ 1.2
CHRNB1-206ENST00000574054 USP4Q13107 963 aa22.55■■□□□ 1.2
CHRNB1-206ENST00000574054 BIRC3Q13489 604 aa22.55■■□□□ 1.2
CHRNB1-206ENST00000574054 ZNF77Q15935 545 aa22.55■■□□□ 1.2
CHRNB1-206ENST00000574054 LAIR1Q6GTX8 287 aa22.55■■□□□ 1.2
CHRNB1-206ENST00000574054 DENND5BQ6ZUT9 1274 aa22.55■■□□□ 1.2
CHRNB1-206ENST00000574054 C12orf56Q8IXR9 622 aa22.55■■□□□ 1.2
CHRNB1-206ENST00000574054 GOLGA5Q8TBA6 731 aa22.55■■□□□ 1.2
CHRNB1-206ENST00000574054 SH3RF2Q8TEC5 729 aa22.55■■□□□ 1.2
CHRNB1-206ENST00000574054 GZF1Q9H116 711 aaPredicted RBP22.55■■□□□ 1.2
CHRNB1-206ENST00000574054 TRPM5Q9NZQ8 1165 aa22.55■■□□□ 1.2
CHRNB1-206ENST00000574054 WNT6Q9Y6F9 365 aa22.55■■□□□ 1.2
CHRNB1-206ENST00000574054 F8VP50 259 aa22.54■■□□□ 1.2
CHRNB1-206ENST00000574054 TRDMT1O14717 391 aaKnown RBP22.54■■□□□ 1.2
CHRNB1-206ENST00000574054 HRO43593 1189 aa22.54■■□□□ 1.2
CHRNB1-206ENST00000574054 ACTN4O43707 911 aaKnown RBP22.54■■□□□ 1.2
CHRNB1-206ENST00000574054 PTPN1P18031 435 aaKnown RBP22.54■■□□□ 1.2
CHRNB1-206ENST00000574054 HDCP19113 662 aa22.54■■□□□ 1.2
CHRNB1-206ENST00000574054 HOXC13P31276 330 aa22.54■■□□□ 1.2
CHRNB1-206ENST00000574054 USP46P62068 366 aa22.54■■□□□ 1.2
CHRNB1-206ENST00000574054 PKN3Q6P5Z2 889 aa22.54■■□□□ 1.2
CHRNB1-206ENST00000574054 OSCP1Q8WVF1 389 aa22.54■■□□□ 1.2
CHRNB1-206ENST00000574054 ATP2A3Q93084 1043 aa22.54■■□□□ 1.2
CHRNB1-206ENST00000574054 SYAP1Q96A49 352 aaPredicted RBP22.54■■□□□ 1.2
CHRNB1-206ENST00000574054 CHFRQ96EP1 664 aa22.54■■□□□ 1.2
CHRNB1-206ENST00000574054 PAGE5Q96GU1 130 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms