RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 BPIFB1Q8TDL5 484 aa18.62■□□□□ 0.57
SMG6-214ENST00000573827 ELMO3Q96BJ8 720 aa18.62■□□□□ 0.57
SMG6-214ENST00000573827 SPATA17Q96L03 361 aa18.62■□□□□ 0.57
SMG6-214ENST00000573827 GCNAQ96QF7 691 aa18.62■□□□□ 0.57
SMG6-214ENST00000573827 SLC22A12Q96S37 553 aa18.62■□□□□ 0.57
SMG6-214ENST00000573827 MMS19Q96T76 1030 aa18.62■□□□□ 0.57
SMG6-214ENST00000573827 SDCBP2Q9H190 292 aa18.62■□□□□ 0.57
SMG6-214ENST00000573827 CHRDQ9H2X0 955 aa18.62■□□□□ 0.57
SMG6-214ENST00000573827 SMYD3Q9H7B4 428 aa18.62■□□□□ 0.57
SMG6-214ENST00000573827 MRPS17Q9Y2R5 130 aaKnown RBP18.62■□□□□ 0.57
SMG6-214ENST00000573827 R4GN57 208 aa18.62■□□□□ 0.57
SMG6-214ENST00000573827 BDNFP23560 247 aa18.61■□□□□ 0.57
SMG6-214ENST00000573827 AP3M2P53677 418 aa18.61■□□□□ 0.57
SMG6-214ENST00000573827 TNK2Q07912 1038 aa18.61■□□□□ 0.57
SMG6-214ENST00000573827 MTAPQ13126 283 aa18.61■□□□□ 0.57
SMG6-214ENST00000573827 NCOA4Q13772 614 aa18.61■□□□□ 0.57
SMG6-214ENST00000573827 GAS6Q14393 721 aa18.61■□□□□ 0.57
SMG6-214ENST00000573827 ZNF268Q14587 947 aaPredicted RBP18.61■□□□□ 0.57
SMG6-214ENST00000573827 TAF12Q16514 161 aa18.61■□□□□ 0.57
SMG6-214ENST00000573827 ZNF528Q3MIS6 628 aa18.61■□□□□ 0.57
SMG6-214ENST00000573827 FMR1NBQ8N0W7 255 aaPredicted RBP18.61■□□□□ 0.57
SMG6-214ENST00000573827 ENGASEQ8NFI3 743 aa18.61■□□□□ 0.57
SMG6-214ENST00000573827 TMC2Q8TDI7 906 aa18.61■□□□□ 0.57
SMG6-214ENST00000573827 FAM3CQ92520 227 aa18.61■□□□□ 0.57
SMG6-214ENST00000573827 NKD2Q969F2 451 aaPredicted RBP18.61■□□□□ 0.57
SMG6-214ENST00000573827 CEP295NLQ96MC4 621 aa18.61■□□□□ 0.57
SMG6-214ENST00000573827 TTLL2Q9BWV7 592 aa18.61■□□□□ 0.57
SMG6-214ENST00000573827 HPS4Q9NQG7 708 aa18.61■□□□□ 0.57
SMG6-214ENST00000573827 SPATA6Q9NWH7 488 aaPredicted RBP18.61■□□□□ 0.57
SMG6-214ENST00000573827 GTSE1Q9NYZ3 720 aa18.61■□□□□ 0.57
SMG6-214ENST00000573827 GCNT4Q9P109 453 aa18.61■□□□□ 0.57
SMG6-214ENST00000573827 MAGEC2Q9UBF1 373 aaPredicted RBP18.61■□□□□ 0.57
SMG6-214ENST00000573827 FBXO4Q9UKT5 387 aa18.61■□□□□ 0.57
SMG6-214ENST00000573827 MAGED2Q9UNF1 606 aaPredicted RBP18.61■□□□□ 0.57
SMG6-214ENST00000573827 R3HCC1Q9Y3T6 440 aaKnown RBP18.61■□□□□ 0.57
SMG6-214ENST00000573827 OTOL1A6NHN0 477 aaPredicted RBP18.6■□□□□ 0.57
SMG6-214ENST00000573827 MAPK13O15264 365 aa18.6■□□□□ 0.57
SMG6-214ENST00000573827 AKAP3O75969 853 aa18.6■□□□□ 0.57
SMG6-214ENST00000573827 PTPN1P18031 435 aaKnown RBP18.6■□□□□ 0.57
SMG6-214ENST00000573827 CCNE1P24864 410 aa18.6■□□□□ 0.57
SMG6-214ENST00000573827 CTHP32929 405 aa18.6■□□□□ 0.57
SMG6-214ENST00000573827 CDH8P55286 799 aa18.6■□□□□ 0.57
SMG6-214ENST00000573827 TRPC3Q13507 836 aa18.6■□□□□ 0.57
SMG6-214ENST00000573827 MAPRE1Q15691 268 aaKnown RBP18.6■□□□□ 0.57
SMG6-214ENST00000573827 MDH1BQ5I0G3 518 aa18.6■□□□□ 0.57
SMG6-214ENST00000573827 PAQR9Q6ZVX9 377 aa18.6■□□□□ 0.57
SMG6-214ENST00000573827 SCN4BQ8IWT1 228 aa18.6■□□□□ 0.57
SMG6-214ENST00000573827 YAF2Q8IY57 180 aa18.6■□□□□ 0.57
SMG6-214ENST00000573827 GUF1Q8N442 669 aaKnown RBP18.6■□□□□ 0.57
SMG6-214ENST00000573827 SYAP1Q96A49 352 aaPredicted RBP18.6■□□□□ 0.57
SMG6-214ENST00000573827 MSANTD3Q96H12 275 aa18.6■□□□□ 0.57
SMG6-214ENST00000573827 C8orf33Q9H7E9 229 aaPredicted RBP18.6■□□□□ 0.57
SMG6-214ENST00000573827 NXF1Q9UBU9 619 aaKnown RBP18.6■□□□□ 0.57
SMG6-214ENST00000573827 NDRG2Q9UN36 371 aaKnown RBP18.6■□□□□ 0.57
SMG6-214ENST00000573827 SPECC1L-ADORA2AF8WAN1 911 aa18.59■□□□□ 0.57
SMG6-214ENST00000573827 DPYSL4O14531 572 aa18.59■□□□□ 0.57
SMG6-214ENST00000573827 TNNC1P63316 161 aa18.59■□□□□ 0.57
SMG6-214ENST00000573827 PLCB2Q00722 1185 aa18.59■□□□□ 0.57
SMG6-214ENST00000573827 SV2AQ7L0J3 742 aa18.59■□□□□ 0.57
SMG6-214ENST00000573827 OR6B3Q8NGW1 331 aa18.59■□□□□ 0.57
SMG6-214ENST00000573827 MRPS31Q92665 395 aaKnown RBP18.59■□□□□ 0.57
SMG6-214ENST00000573827 C8orf48Q96LL4 319 aa18.59■□□□□ 0.57
SMG6-214ENST00000573827 B3GNT5Q9BYG0 378 aa18.59■□□□□ 0.57
SMG6-214ENST00000573827 ZNF518BQ9C0D4 1074 aa18.59■□□□□ 0.57
SMG6-214ENST00000573827 SNX25Q9H3E2 840 aa18.59■□□□□ 0.57
SMG6-214ENST00000573827 TDP1Q9NUW8 608 aa18.59■□□□□ 0.57
SMG6-214ENST00000573827 UXTQ9UBK9 157 aaPredicted RBP18.59■□□□□ 0.57
SMG6-214ENST00000573827 MAPK8IP1Q9UQF2 711 aa18.59■□□□□ 0.57
SMG6-214ENST00000573827 ZNF638Q14966 1978 aaKnown RBP18.59■□□□□ 0.57
SMG6-214ENST00000573827 C2orf78A6NCI8 922 aa18.58■□□□□ 0.56
SMG6-214ENST00000573827 F8VP50 259 aa18.58■□□□□ 0.56
SMG6-214ENST00000573827 IKBKBO14920 756 aa18.58■□□□□ 0.56
SMG6-214ENST00000573827 NCAM2O15394 837 aa18.58■□□□□ 0.56
SMG6-214ENST00000573827 ASS1P00966 412 aaKnown RBP18.58■□□□□ 0.56
SMG6-214ENST00000573827 AVPR1AP37288 418 aa18.58■□□□□ 0.56
SMG6-214ENST00000573827 RAP1GAPP47736 663 aa18.58■□□□□ 0.56
SMG6-214ENST00000573827 NOP14P78316 857 aaKnown RBP18.58■□□□□ 0.56
SMG6-214ENST00000573827 ZXDBP98169 803 aa18.58■□□□□ 0.56
SMG6-214ENST00000573827 BIRC3Q13489 604 aa18.58■□□□□ 0.56
SMG6-214ENST00000573827 ZNF77Q15935 545 aa18.58■□□□□ 0.56
SMG6-214ENST00000573827 ZNF699Q32M78 642 aa18.58■□□□□ 0.56
SMG6-214ENST00000573827 RALGPS2Q86X27 583 aaPredicted RBP18.58■□□□□ 0.56
SMG6-214ENST00000573827 ZBTB44Q8NCP5 570 aa18.58■□□□□ 0.56
SMG6-214ENST00000573827 B3GALNT2Q8NCR0 500 aa18.58■□□□□ 0.56
SMG6-214ENST00000573827 TTC8Q8TAM2 541 aa18.58■□□□□ 0.56
SMG6-214ENST00000573827 SPATA20Q8TB22 786 aa18.58■□□□□ 0.56
SMG6-214ENST00000573827 CSGALNACT1Q8TDX6 532 aa18.58■□□□□ 0.56
SMG6-214ENST00000573827 CYP2S1Q96SQ9 504 aa18.58■□□□□ 0.56
SMG6-214ENST00000573827 SEMA4AQ9H3S1 761 aa18.58■□□□□ 0.56
SMG6-214ENST00000573827 KIF9Q9HAQ2 790 aa18.58■□□□□ 0.56
SMG6-214ENST00000573827 LMAN1LQ9HAT1 526 aa18.58■□□□□ 0.56
SMG6-214ENST00000573827 GKN1Q9NS71 199 aa18.58■□□□□ 0.56
SMG6-214ENST00000573827 LAMTOR5O43504 91 aa18.57■□□□□ 0.56
SMG6-214ENST00000573827 CALUO43852 315 aaPredicted RBP18.57■□□□□ 0.56
SMG6-214ENST00000573827 NR2F2P24468 414 aa18.57■□□□□ 0.56
SMG6-214ENST00000573827 ASPAP45381 313 aa18.57■□□□□ 0.56
SMG6-214ENST00000573827 CYP27A1Q02318 531 aa18.57■□□□□ 0.56
SMG6-214ENST00000573827 ENPEPQ07075 957 aa18.57■□□□□ 0.56
SMG6-214ENST00000573827 PPP3CAQ08209 521 aa18.57■□□□□ 0.56
SMG6-214ENST00000573827 USP4Q13107 963 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms