RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 FNBP1Q96RU3 617 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 MMTAG2Q9BU76 263 aaKnown RBP13.12□□□□□ -0.31
PRPF8-208ENST00000573716 ZHX3Q9H4I2 956 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 TMEM206Q9H813 350 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 ZDHHC4Q9NPG8 344 aa13.12□□□□□ -0.31
PRPF8-208ENST00000573716 CPSF3Q9UKF6 684 aaKnown RBP13.12□□□□□ -0.31
PRPF8-208ENST00000573716 SETXQ7Z333 2677 aaKnown RBP13.11□□□□□ -0.31
PRPF8-208ENST00000573716 A0A0B4J269 797 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 C2orf78A6NCI8 922 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 H0Y626 953 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 SCAMP3O14828 347 aaKnown RBP13.11□□□□□ -0.31
PRPF8-208ENST00000573716 OPHN1O60890 802 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 TRIM16O95361 564 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 ZIC2O95409 532 aaPredicted RBP13.11□□□□□ -0.31
PRPF8-208ENST00000573716 PLA2G4BP0C869 781 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 HNRNPLP14866 589 aaKnown RBP eCLIP13.11□□□□□ -0.31
PRPF8-208ENST00000573716 ITPKAP23677 461 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 ACAT1P24752 427 aaKnown RBP13.11□□□□□ -0.31
PRPF8-208ENST00000573716 TIE1P35590 1138 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 OPRD1P41143 372 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 P2RY2P41231 377 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 ANAPC15P60006 121 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 FAM193AP78312 1265 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 GFPT1Q06210 699 aaPredicted RBP13.11□□□□□ -0.31
PRPF8-208ENST00000573716 ST3GAL1Q11201 340 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 SEMA3BQ13214 749 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 DHX8Q14562 1220 aaKnown RBP13.11□□□□□ -0.31
PRPF8-208ENST00000573716 NFE2Q16621 373 aaPredicted RBP13.11□□□□□ -0.31
PRPF8-208ENST00000573716 COL28A1Q2UY09 1125 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 SV2CQ496J9 727 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 PIP4P1Q86T03 277 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 PDZD3Q86UT5 571 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 PROSER1Q86XN7 944 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 CCDC83Q8IWF9 413 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 SFTPA1Q8IWL2 248 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 MYCT1Q8N699 235 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 SYT2Q8N9I0 419 aaPredicted RBP13.11□□□□□ -0.31
PRPF8-208ENST00000573716 FSIP1Q8NA03 581 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 TXNDC5Q8NBS9 432 aaKnown RBP13.11□□□□□ -0.31
PRPF8-208ENST00000573716 OR2I1PQ8NGU4 316 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 DERAQ9Y315 318 aa13.11□□□□□ -0.31
PRPF8-208ENST00000573716 MYMKA6NI61 221 aa13.1□□□□□ -0.31
PRPF8-208ENST00000573716 KPNA7A9QM74 516 aa13.1□□□□□ -0.31
PRPF8-208ENST00000573716 SGK1O00141 431 aa13.1□□□□□ -0.31
PRPF8-208ENST00000573716 NOL4O94818 638 aa13.1□□□□□ -0.31
PRPF8-208ENST00000573716 FAM13AO94988 1023 aa13.1□□□□□ -0.31
PRPF8-208ENST00000573716 ADRB2P07550 413 aa13.1□□□□□ -0.31
PRPF8-208ENST00000573716 HDCP19113 662 aa13.1□□□□□ -0.31
PRPF8-208ENST00000573716 SLC12A3P55017 1021 aa13.1□□□□□ -0.31
PRPF8-208ENST00000573716 MRPS21P82921 87 aaKnown RBP13.1□□□□□ -0.31
PRPF8-208ENST00000573716 KDSRQ06136 332 aa13.1□□□□□ -0.31
PRPF8-208ENST00000573716 SCAPQ12770 1279 aa13.1□□□□□ -0.31
PRPF8-208ENST00000573716 SOWAHCQ53LP3 525 aaPredicted RBP13.1□□□□□ -0.31
PRPF8-208ENST00000573716 ADALQ6DHV7 355 aa13.1□□□□□ -0.31
PRPF8-208ENST00000573716 FAM184AQ8NB25 1140 aa13.1□□□□□ -0.31
PRPF8-208ENST00000573716 OLIG1Q8TAK6 271 aa13.1□□□□□ -0.31
PRPF8-208ENST00000573716 ZNF560Q96MR9 790 aa13.1□□□□□ -0.31
PRPF8-208ENST00000573716 PNMA5Q96PV4 448 aa13.1□□□□□ -0.31
PRPF8-208ENST00000573716 POLMQ9NP87 494 aaPredicted RBP13.1□□□□□ -0.31
PRPF8-208ENST00000573716 SLC6A14Q9UN76 642 aa13.1□□□□□ -0.31
PRPF8-208ENST00000573716 GPSM3Q9Y4H4 160 aa13.1□□□□□ -0.31
PRPF8-208ENST00000573716 WDFY3Q8IZQ1 3526 aa13.1□□□□□ -0.31
PRPF8-208ENST00000573716 IGSF10Q6WRI0 2623 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 TCRBV21S2A2A0A5A6 115 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 EIF4E1BA6NMX2 242 aaKnown RBP13.09□□□□□ -0.31
PRPF8-208ENST00000573716 TISP43B9A030 160 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 ANKRD63C9JTQ0 380 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 APODP05090 189 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 KRT18P05783 430 aaKnown RBP13.09□□□□□ -0.31
PRPF8-208ENST00000573716 DPP6P42658 865 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 SLC6A11P48066 632 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 TOB1P50616 345 aaPredicted RBP13.09□□□□□ -0.31
PRPF8-208ENST00000573716 RPL6Q02878 288 aaKnown RBP13.09□□□□□ -0.31
PRPF8-208ENST00000573716 BYSLQ13895 437 aaKnown RBP13.09□□□□□ -0.31
PRPF8-208ENST00000573716 CCDC142Q17RM4 750 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 DUOXA1Q1HG43 343 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 ZNF423Q2M1K9 1284 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 ARSHQ5FYA8 562 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 EMC10Q5UCC4 262 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 SLC39A4Q6P5W5 647 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 SLC23A3Q6PIS1 610 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 FILIP1Q7Z7B0 1213 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 GPBP1Q86WP2 473 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 SPATA2LQ8IUW3 424 aaPredicted RBP13.09□□□□□ -0.31
PRPF8-208ENST00000573716 IL17RCQ8NAC3 791 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 FBXO18Q8NFZ0 1043 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 SPATA18Q8TC71 538 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 LRRC15Q8TF66 581 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 TRMT2BQ96GJ1 504 aaKnown RBP13.09□□□□□ -0.31
PRPF8-208ENST00000573716 REEP2Q9BRK0 252 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 ASB7Q9H672 318 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 DDX43Q9NXZ2 648 aaKnown RBP13.09□□□□□ -0.31
PRPF8-208ENST00000573716 GCNT4Q9P109 453 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 PILRBQ9UKJ0 227 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 GTF3C4Q9UKN8 822 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 C2CD2Q9Y426 696 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 MYOFQ9NZM1 2061 aa13.09□□□□□ -0.31
PRPF8-208ENST00000573716 PLXND1Q9Y4D7 1925 aa13.08□□□□□ -0.32
PRPF8-208ENST00000573716 LEFTY2O00292 366 aa13.08□□□□□ -0.32
PRPF8-208ENST00000573716 LAD1O00515 517 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms