RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 JRKLQ9Y4A0 524 aa10.18□□□□□ -0.78
NDE1-208ENST00000573694 USP15Q9Y4E8 981 aaPredicted RBP10.18□□□□□ -0.78
NDE1-208ENST00000573694 MEIS3P2A8K0S8 358 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 GATMP50440 423 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 DNA2P51530 1060 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 BPIFB4P59827 614 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 NOMO3P69849 1222 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 SOX4Q06945 474 aaPredicted RBP10.17□□□□□ -0.78
NDE1-208ENST00000573694 DLX2Q07687 328 aaPredicted RBP10.17□□□□□ -0.78
NDE1-208ENST00000573694 DSC1Q08554 894 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 ELAVL2Q12926 359 aaKnown RBP10.17□□□□□ -0.78
NDE1-208ENST00000573694 ELF2Q15723 593 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 WHAMMP3Q1A5X7 153 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 ACAD10Q6JQN1 1059 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 LLGL2Q6P1M3 1020 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 ALKAL1Q6UXT8 129 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 AGMOQ6ZNB7 445 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 ADGRD2Q7Z7M1 963 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 NT5DC4Q86YG4 428 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 RNF135Q8IUD6 432 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 CD302Q8IX05 232 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 ZDHHC14Q8IZN3 488 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 SLC35G2Q8TBE7 412 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 WHAMMQ8TF30 809 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 COG1Q8WTW3 980 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 TFAP2BQ92481 460 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 FAM122AQ96E09 287 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 HPDLQ96IR7 371 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 CAPZA3Q96KX2 299 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 TWNKQ96RR1 684 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 TSPAN18Q96SJ8 248 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 PLEKHA4Q9H4M7 779 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 VRTNQ9H8Y1 702 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 GOLGA2P5Q9HBQ8 144 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 CD320Q9NPF0 282 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 MRPL17Q9NRX2 175 aaKnown RBP10.17□□□□□ -0.78
NDE1-208ENST00000573694 SMARCAL1Q9NZC9 954 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 EHD2Q9NZN4 543 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 FNIP2Q9P278 1114 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 RAPGEFL1Q9UHV5 662 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 SNX12Q9UMY4 172 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 DERAQ9Y315 318 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 HYOU1Q9Y4L1 999 aa10.17□□□□□ -0.78
NDE1-208ENST00000573694 PDE2AO00408 941 aaPredicted RBP10.16□□□□□ -0.78
NDE1-208ENST00000573694 DYNC1I1O14576 645 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 BUB1BO60566 1050 aaPredicted RBP10.16□□□□□ -0.78
NDE1-208ENST00000573694 LILRB3O75022 631 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 EFEMP2O95967 443 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 SOD2P04179 222 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 CYP1A1P04798 512 aaPredicted RBP10.16□□□□□ -0.78
NDE1-208ENST00000573694 CYP1A2P05177 515 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 ADH1AP07327 375 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 GZMAP12544 262 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 UNGP13051 313 aaPredicted RBP10.16□□□□□ -0.78
NDE1-208ENST00000573694 IBSPP21815 317 aaPredicted RBP10.16□□□□□ -0.78
NDE1-208ENST00000573694 ATICP31939 592 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 CXCR5P32302 372 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 RAD23BP54727 409 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 YWHAEP62258 255 aaKnown RBP10.16□□□□□ -0.78
NDE1-208ENST00000573694 RBP5P82980 135 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 ZBTB6Q15916 424 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 WDR72Q3MJ13 1102 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 C2CD6Q53TS8 623 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 TEX35Q5T0J7 233 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 MEI1Q5TIA1 1274 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 C9orf57Q5W0N0 161 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 MON1BQ7L1V2 547 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 PHLDB2Q86SQ0 1253 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 ZNF677Q86XU0 584 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 CPNE8Q86YQ8 564 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 RNF168Q8IYW5 571 aaPredicted RBP10.16□□□□□ -0.78
NDE1-208ENST00000573694 RNF169Q8NCN4 708 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 BEST2Q8NFU1 509 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 CPA5Q8WXQ8 436 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 LPPQ93052 612 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 CYFIP2Q96F07 1278 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 OSBPL9Q96SU4 736 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 ELOVL4Q9GZR5 314 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 RXFP1Q9HBX9 757 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 CACNG4Q9UBN1 327 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 HCFC2Q9Y5Z7 792 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 SAR1BQ9Y6B6 198 aa10.16□□□□□ -0.78
NDE1-208ENST00000573694 ZFP37Q9Y6Q3 630 aaPredicted RBP10.16□□□□□ -0.78
NDE1-208ENST00000573694 SMIM28A0A1B0GU29 152 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 ARL5CA6NH57 179 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 TMEM110-MUSTN1A8MSY1 372 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 PTGESO14684 152 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 LINC01565O15544 149 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 CLASP2O75122 1294 aaKnown RBP10.15□□□□□ -0.78
NDE1-208ENST00000573694 CILPO75339 1184 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 KIF4AO95239 1232 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 STAU1O95793 577 aaKnown RBP10.15□□□□□ -0.78
NDE1-208ENST00000573694 POU2F2P09086 479 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 PAX3P23760 479 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 MLH1P40692 756 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 TNNC1P63316 161 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 GPC5P78333 572 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 CENPCQ03188 943 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 SIGLEC14Q08ET2 396 aa10.15□□□□□ -0.78
NDE1-208ENST00000573694 GRIK3Q13003 919 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms