RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 SERTM1A2A2V5 107 aa8□□□□□ -1.13
NUP88-205ENST00000572809 MEN1O00255 615 aa8□□□□□ -1.13
NUP88-205ENST00000572809 CLIC2O15247 247 aa8□□□□□ -1.13
NUP88-205ENST00000572809 TGFB1I1O43294 461 aa8□□□□□ -1.13
NUP88-205ENST00000572809 MICAL2O94851 1124 aa8□□□□□ -1.13
NUP88-205ENST00000572809 VNN2O95498 520 aa8□□□□□ -1.13
NUP88-205ENST00000572809 KRT19P08727 400 aa8□□□□□ -1.13
NUP88-205ENST00000572809 TMEM191BP0C7N4 346 aa8□□□□□ -1.13
NUP88-205ENST00000572809 SRFP11831 508 aa8□□□□□ -1.13
NUP88-205ENST00000572809 POLR2BP30876 1174 aaKnown RBP8□□□□□ -1.13
NUP88-205ENST00000572809 PNPLA4P41247 253 aa8□□□□□ -1.13
NUP88-205ENST00000572809 ALDH1A3P47895 512 aa8□□□□□ -1.13
NUP88-205ENST00000572809 EPHB3P54753 998 aa8□□□□□ -1.13
NUP88-205ENST00000572809 VCPP55072 806 aaKnown RBP8□□□□□ -1.13
NUP88-205ENST00000572809 SNRPFP62306 86 aaKnown RBP8□□□□□ -1.13
NUP88-205ENST00000572809 GPC5P78333 572 aa8□□□□□ -1.13
NUP88-205ENST00000572809 RBP5P82980 135 aa8□□□□□ -1.13
NUP88-205ENST00000572809 TWF1Q12792 350 aa8□□□□□ -1.13
NUP88-205ENST00000572809 PSMD2Q13200 908 aa8□□□□□ -1.13
NUP88-205ENST00000572809 PLD1Q13393 1074 aa8□□□□□ -1.13
NUP88-205ENST00000572809 BECN1Q14457 450 aa8□□□□□ -1.13
NUP88-205ENST00000572809 DUOXA2Q1HG44 320 aa8□□□□□ -1.13
NUP88-205ENST00000572809 SLC5A9Q2M3M2 681 aa8□□□□□ -1.13
NUP88-205ENST00000572809 PRSS36Q5K4E3 855 aa8□□□□□ -1.13
NUP88-205ENST00000572809 WSCD1Q658N2 575 aa8□□□□□ -1.13
NUP88-205ENST00000572809 CENPPQ6IPU0 288 aa8□□□□□ -1.13
NUP88-205ENST00000572809 MTSS1LQ765P7 747 aa8□□□□□ -1.13
NUP88-205ENST00000572809 PDZD4Q76G19 769 aaPredicted RBP8□□□□□ -1.13
NUP88-205ENST00000572809 NELFCDQ8IXH7 590 aa8□□□□□ -1.13
NUP88-205ENST00000572809 C1orf127Q8N9H9 656 aa8□□□□□ -1.13
NUP88-205ENST00000572809 ATAD1Q8NBU5 361 aa8□□□□□ -1.13
NUP88-205ENST00000572809 FLCNQ8NFG4 579 aa8□□□□□ -1.13
NUP88-205ENST00000572809 GPR152Q8TDT2 470 aa8□□□□□ -1.13
NUP88-205ENST00000572809 SCFD1Q8WVM8 642 aa8□□□□□ -1.13
NUP88-205ENST00000572809 ING5Q8WYH8 240 aa8□□□□□ -1.13
NUP88-205ENST00000572809 PAGE5Q96GU1 130 aa8□□□□□ -1.13
NUP88-205ENST00000572809 ANKRD36BP1Q96IX9 119 aa8□□□□□ -1.13
NUP88-205ENST00000572809 CHAMP1Q96JM3 812 aa8□□□□□ -1.13
NUP88-205ENST00000572809 ZNF560Q96MR9 790 aa8□□□□□ -1.13
NUP88-205ENST00000572809 TMEM209Q96SK2 561 aa8□□□□□ -1.13
NUP88-205ENST00000572809 SCAND2PQ9GZW5 306 aaPredicted RBP8□□□□□ -1.13
NUP88-205ENST00000572809 INTS13Q9NVM9 706 aa8□□□□□ -1.13
NUP88-205ENST00000572809 GDE1Q9NZC3 331 aa8□□□□□ -1.13
NUP88-205ENST00000572809 HSPBP1Q9NZL4 362 aa8□□□□□ -1.13
NUP88-205ENST00000572809 HSFX1Q9UBD0 423 aa8□□□□□ -1.13
NUP88-205ENST00000572809 USP25Q9UHP3 1055 aa8□□□□□ -1.13
NUP88-205ENST00000572809 ITGA11Q9UKX5 1188 aa8□□□□□ -1.13
NUP88-205ENST00000572809 R3HCC1Q9Y3T6 440 aaKnown RBP8□□□□□ -1.13
NUP88-205ENST00000572809 HRH3Q9Y5N1 445 aa8□□□□□ -1.13
NUP88-205ENST00000572809 DOCK6Q96HP0 2047 aa8□□□□□ -1.13
NUP88-205ENST00000572809 MTMR11A4FU01 709 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 KRBA1A5PL33 1030 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.99□□□□□ -1.13
NUP88-205ENST00000572809 HUS1O60921 280 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 TNNC2P02585 160 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 MYL4P12829 197 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 PFKFB1P16118 471 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 NPR3P17342 541 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 MAPK1P28482 360 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 NOS2P35228 1153 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 CCR2P41597 374 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 SYKP43405 635 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 TUFMP49411 452 aaKnown RBP7.99□□□□□ -1.13
NUP88-205ENST00000572809 SMARCB1Q12824 385 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 MYO1EQ12965 1108 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 TEAD4Q15561 434 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 KNOP1Q1ED39 458 aaKnown RBP7.99□□□□□ -1.13
NUP88-205ENST00000572809 SLC39A12Q504Y0 691 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 TBCELQ5QJ74 424 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 LMBRD2Q68DH5 695 aaPredicted RBP7.99□□□□□ -1.13
NUP88-205ENST00000572809 SCARA3Q6AZY7 606 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 ALKBH2Q6NS38 261 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 FOXR1Q6PIV2 292 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 DPH6Q7L8W6 267 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 HS2ST1Q7LGA3 356 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 DNAJB7Q7Z6W7 309 aaPredicted RBP7.99□□□□□ -1.13
NUP88-205ENST00000572809 LRRTM3Q86VH5 581 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 CBWD2Q8IUF1 395 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 GRAMD1CQ8IYS0 662 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 DCP1BQ8IZD4 617 aaKnown RBP7.99□□□□□ -1.13
NUP88-205ENST00000572809 LRRC52Q8N7C0 313 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 TMEM105Q8N8V8 129 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 KDF1Q8NAX2 398 aaPredicted RBP7.99□□□□□ -1.13
NUP88-205ENST00000572809 XXYLT1Q8NBI6 393 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 LEMD2Q8NC56 503 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 PRSS33Q8NF86 280 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 OR10T2Q8NGX3 314 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 CXorf38Q8TB03 319 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 TCEAL4Q96EI5 215 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 KXD1Q9BQD3 176 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 RTP3Q9BQQ7 232 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 KRTAP9-2Q9BYQ4 174 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 ZCWPW1Q9H0M4 648 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 CRISPLD1Q9H336 500 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 ASAH2Q9NR71 780 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 SLC2A4RGQ9NR83 387 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 AGPAT3Q9NRZ7 376 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 CGNQ9P2M7 1197 aaKnown RBP7.99□□□□□ -1.13
NUP88-205ENST00000572809 DCTN4Q9UJW0 460 aa7.99□□□□□ -1.13
NUP88-205ENST00000572809 CA14Q9ULX7 337 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms