RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 EIF2S3P41091 472 aaKnown RBP14.1□□□□□ -0.15
CCDC40-208ENST00000572270 PEX3P56589 373 aa14.1□□□□□ -0.15
CCDC40-208ENST00000572270 KCNB1Q14721 858 aa14.1□□□□□ -0.15
CCDC40-208ENST00000572270 SEZ6Q53EL9 994 aa14.1□□□□□ -0.15
CCDC40-208ENST00000572270 TAF1BQ53T94 588 aaPredicted RBP14.1□□□□□ -0.15
CCDC40-208ENST00000572270 DIEXFQ68CQ4 756 aaKnown RBP14.1□□□□□ -0.15
CCDC40-208ENST00000572270 TRMT11Q7Z4G4 463 aaKnown RBP14.1□□□□□ -0.15
CCDC40-208ENST00000572270 THEM5Q8N1Q8 247 aa14.1□□□□□ -0.15
CCDC40-208ENST00000572270 OXER1Q8TDS5 423 aa14.1□□□□□ -0.15
CCDC40-208ENST00000572270 RHBDD1Q8TEB9 315 aa14.1□□□□□ -0.15
CCDC40-208ENST00000572270 BAP1Q92560 729 aa14.1□□□□□ -0.15
CCDC40-208ENST00000572270 CYP2S1Q96SQ9 504 aa14.1□□□□□ -0.15
CCDC40-208ENST00000572270 IGSF5Q9NSI5 407 aa14.1□□□□□ -0.15
CCDC40-208ENST00000572270 DSEQ9UL01 958 aa14.1□□□□□ -0.15
CCDC40-208ENST00000572270 GOLGA4Q13439 2230 aaKnown RBP14.1□□□□□ -0.15
CCDC40-208ENST00000572270 ABLIM1O14639 778 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 FLRT2O43155 660 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 ADAM23O75077 832 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 TADA3O75528 432 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 ZNF883P0CG24 379 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 PAX3P23760 479 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 EIF2DP41214 584 aaKnown RBP14.09□□□□□ -0.15
CCDC40-208ENST00000572270 MATR3P43243 847 aaKnown RBP eCLIP14.09□□□□□ -0.15
CCDC40-208ENST00000572270 NPTX2P47972 431 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 LILRA4P59901 499 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 PPP2R3AQ06190 1150 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 SCRN1Q12765 414 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 RESTQ13127 1097 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 EARS2Q5JPH6 523 aaKnown RBP14.09□□□□□ -0.15
CCDC40-208ENST00000572270 WDR45BQ5MNZ6 344 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 EMC10Q5UCC4 262 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 SFTPA1Q8IWL2 248 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 DCP1BQ8IZD4 617 aaKnown RBP14.09□□□□□ -0.15
CCDC40-208ENST00000572270 FSIP1Q8NA03 581 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 STKLD1Q8NE28 680 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 ERMNQ8TAM6 284 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 BAHD1Q8TBE0 780 aaPredicted RBP14.09□□□□□ -0.15
CCDC40-208ENST00000572270 FOXJ1Q92949 421 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 SLC22A12Q96S37 553 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 ARID3AQ99856 593 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 ZDHHC4Q9NPG8 344 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 KMT5AQ9NQR1 393 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 ARHGEF4Q9NR80 690 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 TM7SF3Q9NS93 570 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 PCDHB5Q9Y5E4 795 aa14.09□□□□□ -0.15
CCDC40-208ENST00000572270 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.08□□□□□ -0.16
CCDC40-208ENST00000572270 FAM205CA6NFA0 338 aa14.08□□□□□ -0.16
CCDC40-208ENST00000572270 ERVH48-1M5A8F1 160 aa14.08□□□□□ -0.16
CCDC40-208ENST00000572270 PLK4O00444 970 aa14.08□□□□□ -0.16
CCDC40-208ENST00000572270 TOM1L1O75674 476 aa14.08□□□□□ -0.16
CCDC40-208ENST00000572270 CYP11A1P05108 521 aa14.08□□□□□ -0.16
CCDC40-208ENST00000572270 TCF3P15923 654 aa14.08□□□□□ -0.16
CCDC40-208ENST00000572270 GABRG2P18507 467 aa14.08□□□□□ -0.16
CCDC40-208ENST00000572270 GRIA2P42262 883 aa14.08□□□□□ -0.16
CCDC40-208ENST00000572270 MATKP42679 507 aa14.08□□□□□ -0.16
CCDC40-208ENST00000572270 TNFRSF4P43489 277 aa14.08□□□□□ -0.16
CCDC40-208ENST00000572270 KIR2DL1P43626 348 aaPredicted RBP14.08□□□□□ -0.16
CCDC40-208ENST00000572270 PDE6CP51160 858 aa14.08□□□□□ -0.16
CCDC40-208ENST00000572270 EVCP57679 992 aa14.08□□□□□ -0.16
CCDC40-208ENST00000572270 KDSRQ06136 332 aa14.08□□□□□ -0.16
CCDC40-208ENST00000572270 STRN3Q13033 797 aa14.08□□□□□ -0.16
CCDC40-208ENST00000572270 GAB4Q2WGN9 574 aa14.08□□□□□ -0.16
CCDC40-208ENST00000572270 CCDC157Q569K6 752 aa14.08□□□□□ -0.16
CCDC40-208ENST00000572270 IL27RAQ6UWB1 636 aa14.08□□□□□ -0.16
CCDC40-208ENST00000572270 TAS1R3Q7RTX0 852 aa14.08□□□□□ -0.16
CCDC40-208ENST00000572270 ARL14EPQ8N8R7 260 aaPredicted RBP14.08□□□□□ -0.16
CCDC40-208ENST00000572270 ENGASEQ8NFI3 743 aa14.08□□□□□ -0.16
CCDC40-208ENST00000572270 ZBTB45Q96K62 511 aaPredicted RBP14.08□□□□□ -0.16
CCDC40-208ENST00000572270 GAREM1Q9H706 876 aa14.08□□□□□ -0.16
CCDC40-208ENST00000572270 BRMS1Q9HCU9 246 aa14.08□□□□□ -0.16
CCDC40-208ENST00000572270 DACH1Q9UI36 760 aa14.08□□□□□ -0.16
CCDC40-208ENST00000572270 CYP8B1Q9UNU6 501 aa14.08□□□□□ -0.16
CCDC40-208ENST00000572270 RBM19Q9Y4C8 960 aaKnown RBP14.08□□□□□ -0.16
CCDC40-208ENST00000572270 A0A1B0GTW7 788 aa14.07□□□□□ -0.16
CCDC40-208ENST00000572270 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.07□□□□□ -0.16
CCDC40-208ENST00000572270 CILPO75339 1184 aa14.07□□□□□ -0.16
CCDC40-208ENST00000572270 PRPF40AO75400 957 aaKnown RBP14.07□□□□□ -0.16
CCDC40-208ENST00000572270 CYP17A1P05093 508 aa14.07□□□□□ -0.16
CCDC40-208ENST00000572270 HOXB2P14652 356 aa14.07□□□□□ -0.16
CCDC40-208ENST00000572270 RPA1P27694 616 aa14.07□□□□□ -0.16
CCDC40-208ENST00000572270 SLC6A11P48066 632 aa14.07□□□□□ -0.16
CCDC40-208ENST00000572270 GPR15P49685 360 aa14.07□□□□□ -0.16
CCDC40-208ENST00000572270 GUCY2FP51841 1108 aa14.07□□□□□ -0.16
CCDC40-208ENST00000572270 SMAD1Q15797 465 aaKnown RBP14.07□□□□□ -0.16
CCDC40-208ENST00000572270 ZBTB6Q15916 424 aa14.07□□□□□ -0.16
CCDC40-208ENST00000572270 C6orf118Q5T5N4 469 aa14.07□□□□□ -0.16
CCDC40-208ENST00000572270 FAM181AQ8N9Y4 354 aa14.07□□□□□ -0.16
CCDC40-208ENST00000572270 TRMT2BQ96GJ1 504 aaKnown RBP14.07□□□□□ -0.16
CCDC40-208ENST00000572270 ZNF419Q96HQ0 510 aaPredicted RBP14.07□□□□□ -0.16
CCDC40-208ENST00000572270 ARHGAP28Q9P2N2 729 aa14.07□□□□□ -0.16
CCDC40-208ENST00000572270 ARHGAP26Q9UNA1 814 aa14.07□□□□□ -0.16
CCDC40-208ENST00000572270 ATMQ13315 3056 aa14.07□□□□□ -0.16
CCDC40-208ENST00000572270 TCHHQ07283 1943 aa14.07□□□□□ -0.16
CCDC40-208ENST00000572270 ANAPC1Q9H1A4 1944 aa14.06□□□□□ -0.16
CCDC40-208ENST00000572270 TTC26A0AVF1 554 aa14.06□□□□□ -0.16
CCDC40-208ENST00000572270 MEI4A8MW99 385 aa14.06□□□□□ -0.16
CCDC40-208ENST00000572270 PYCARD-AS1I3L0S3 204 aa14.06□□□□□ -0.16
CCDC40-208ENST00000572270 PPEF2O14830 753 aa14.06□□□□□ -0.16
CCDC40-208ENST00000572270 CLDN3O15551 220 aa14.06□□□□□ -0.16
CCDC40-208ENST00000572270 CDKL5O76039 1030 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms