RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 DNAJB7Q7Z6W7 309 aaPredicted RBP7.57□□□□□ -1.2
CHD3-213ENST00000571249 FERMT3Q86UX7 667 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 TICAM2Q86XR7 235 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 TTC16Q8NEE8 873 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 CRYGNQ8WXF5 182 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 GJA10Q969M2 543 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 RILPL2Q969X0 211 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 ZNF578Q96N58 590 aaPredicted RBP7.57□□□□□ -1.2
CHD3-213ENST00000571249 PGLYRP2Q96PD5 576 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 DSCC1Q9BVC3 393 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 GOLGA2P5Q9HBQ8 144 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 MAFFQ9ULX9 164 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 SLC27A5Q9Y2P5 690 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 PCDHB1Q9Y5F3 818 aa7.57□□□□□ -1.2
CHD3-213ENST00000571249 NUP210Q8TEM1 1887 aaPredicted RBP7.56□□□□□ -1.2
CHD3-213ENST00000571249 A0A1B0GUA9 196 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 MSH4O15457 936 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 ATMINO43313 823 aaPredicted RBP7.56□□□□□ -1.2
CHD3-213ENST00000571249 RFPL3O75679 317 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 GLDCP23378 1020 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 SLC6A11P48066 632 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 SERPINB4P48594 390 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 CSNK1EP49674 416 aaKnown RBP7.56□□□□□ -1.2
CHD3-213ENST00000571249 MRPS21P82921 87 aaKnown RBP7.56□□□□□ -1.2
CHD3-213ENST00000571249 MBTD1Q05BQ5 628 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 DUSP4Q13115 394 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 NR1H3Q13133 447 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 PLD1Q13393 1074 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 MRPL58Q14197 206 aaKnown RBP7.56□□□□□ -1.2
CHD3-213ENST00000571249 NCAPHQ15003 741 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 PDGFRLQ15198 375 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 NR6A1Q15406 480 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 UPP1Q16831 310 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 ARL13BQ3SXY8 428 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 SYCP2LQ5T4T6 812 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 CC2D1AQ6P1N0 951 aaPredicted RBP7.56□□□□□ -1.2
CHD3-213ENST00000571249 CWC27Q6UX04 472 aaKnown RBP7.56□□□□□ -1.2
CHD3-213ENST00000571249 SGMS1Q86VZ5 419 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 SKAP1Q86WV1 359 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 RAB11FIP4Q86YS3 637 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 TEX2Q8IWB9 1127 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 CMTM8Q8IZV2 173 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 CPA6Q8N4T0 437 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 IGDCC4Q8TDY8 1250 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 LENG9Q96B70 501 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 VCPIP1Q96JH7 1222 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 CEP170P1Q96L14 293 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 FAM20AQ96MK3 541 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 ARHGAP9Q9BRR9 750 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 TEKT3Q9BXF9 490 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 DPH1Q9BZG8 443 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 SLC6A17Q9H1V8 727 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 LINC00597Q9H2U6 94 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 PCDHGA1Q9Y5H4 931 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 SNX11Q9Y5W9 270 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 WNT6Q9Y6F9 365 aa7.56□□□□□ -1.2
CHD3-213ENST00000571249 VPS37CA5D8V6 355 aaPredicted RBP7.55□□□□□ -1.2
CHD3-213ENST00000571249 ENC1O14682 589 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 BCAT2O15382 392 aaPredicted RBP7.55□□□□□ -1.2
CHD3-213ENST00000571249 NDUFS2O75306 463 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 RECQL4O94761 1208 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 FGF19O95750 216 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 OR4Q2P0C623 313 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 CPB1P15086 417 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 AFMP43652 599 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 ALDH1A3P47895 512 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 ACADVLP49748 655 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 ANTXR2P58335 489 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 NUCB1Q02818 461 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 GAB4Q2WGN9 574 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 GLRA4Q5JXX5 417 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 WDR45BQ5MNZ6 344 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 LRCH2Q5VUJ6 765 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 C1QL3Q5VWW1 255 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 PPP1R18Q6NYC8 613 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 IL27RAQ6UWB1 636 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 KDM7AQ6ZMT4 941 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 RALYLQ86SE5 291 aaKnown RBP7.55□□□□□ -1.2
CHD3-213ENST00000571249 GATAD2AQ86YP4 633 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 EFCAB13Q8IY85 973 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 MMP21Q8N119 569 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 MAB21L3Q8N8X9 362 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 RDM1Q8NG50 284 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 TCP11Q8WWU5 503 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 DNASE2BQ8WZ79 361 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 SLC5A5Q92911 643 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 RIT2Q99578 217 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 DHX33Q9H6R0 707 aaKnown RBP7.55□□□□□ -1.2
CHD3-213ENST00000571249 IL21Q9HBE4 155 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 DUS2Q9NX74 493 aaKnown RBP7.55□□□□□ -1.2
CHD3-213ENST00000571249 CLCA2Q9UQC9 943 aa7.55□□□□□ -1.2
CHD3-213ENST00000571249 WIPF3A6NGB9 483 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 CFAP99D6REC4 459 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 SYN3O14994 580 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 ADAMTS3O15072 1205 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 NMT1P30419 496 aaKnown RBP7.54□□□□□ -1.2
CHD3-213ENST00000571249 CIITAP33076 1130 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 AVPR1AP37288 418 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 WASP42768 502 aa7.54□□□□□ -1.2
CHD3-213ENST00000571249 KIR2DL1P43626 348 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms