RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 TREML1Q86YW5 311 aa16.13■□□□□ 0.17
SMG6-207ENST00000570756 RBM12BQ8IXT5 1001 aaKnown RBP16.13■□□□□ 0.17
SMG6-207ENST00000570756 PDIK1LQ8N165 341 aa16.13■□□□□ 0.17
SMG6-207ENST00000570756 FEZF2Q8TBJ5 459 aa16.13■□□□□ 0.17
SMG6-207ENST00000570756 TOPORSQ9NS56 1045 aaPredicted RBP16.13■□□□□ 0.17
SMG6-207ENST00000570756 CNTN3Q9P232 1028 aa16.13■□□□□ 0.17
SMG6-207ENST00000570756 SH3BP1Q9Y3L3 701 aa16.13■□□□□ 0.17
SMG6-207ENST00000570756 ATP9BO43861 1147 aa16.12■□□□□ 0.17
SMG6-207ENST00000570756 P4HBP07237 508 aaKnown RBP16.12■□□□□ 0.17
SMG6-207ENST00000570756 INHBAP08476 426 aa16.12■□□□□ 0.17
SMG6-207ENST00000570756 ARP10275 920 aa16.12■□□□□ 0.17
SMG6-207ENST00000570756 RGS2P41220 211 aa16.12■□□□□ 0.17
SMG6-207ENST00000570756 NCKAP1LP55160 1127 aa16.12■□□□□ 0.17
SMG6-207ENST00000570756 RAPH1Q70E73 1250 aa16.12■□□□□ 0.17
SMG6-207ENST00000570756 PRPF39Q86UA1 669 aaKnown RBP16.12■□□□□ 0.17
SMG6-207ENST00000570756 PHF13Q86YI8 300 aaPredicted RBP16.12■□□□□ 0.17
SMG6-207ENST00000570756 FBXO27Q8NI29 283 aa16.12■□□□□ 0.17
SMG6-207ENST00000570756 MFSD14AQ96MC6 490 aa16.12■□□□□ 0.17
SMG6-207ENST00000570756 S100A14Q9HCY8 104 aa16.12■□□□□ 0.17
SMG6-207ENST00000570756 CIDEBQ9UHD4 219 aa16.12■□□□□ 0.17
SMG6-207ENST00000570756 USP1O94782 785 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 TMCC1O94876 653 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 ASLP04424 464 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 SETSIPP0DME0 302 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 HARSP12081 509 aaKnown RBP16.11■□□□□ 0.17
SMG6-207ENST00000570756 STIP1P31948 543 aaKnown RBP16.11■□□□□ 0.17
SMG6-207ENST00000570756 RARRES1P49788 294 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 RBM5P52756 815 aaKnown RBP eCLIP16.11■□□□□ 0.17
SMG6-207ENST00000570756 PEX3P56589 373 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 C1QBPQ07021 282 aaKnown RBP16.11■□□□□ 0.17
SMG6-207ENST00000570756 HIC1Q14526 733 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 FNBP1LQ5T0N5 605 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 SIAH1Q8IUQ4 282 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 LENG1Q96BZ8 264 aaPredicted RBP16.11■□□□□ 0.17
SMG6-207ENST00000570756 CLPTM1LQ96KA5 538 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 KLHL4Q9C0H6 718 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 C17orf75Q9HAS0 396 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 PREBQ9HCU5 417 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 GINM1Q9NU53 330 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 POLLQ9UGP5 575 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 SSX2IPQ9Y2D8 614 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 hCG_1818297A0A087WSY0 165 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 COPEO14579 308 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 VIL1P09327 827 aaKnown RBP16.11■□□□□ 0.17
SMG6-207ENST00000570756 DSG3P32926 999 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 UBXN2AP68543 259 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 NOMO3P69849 1222 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 IRX4P78413 519 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 ENPEPQ07075 957 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 CYP24A1Q07973 514 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 MSS51Q4VC12 460 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 ATP13A4Q4VNC1 1196 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 WDR44Q5JSH3 913 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 NAT8LQ8N9F0 302 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 CPT1BQ92523 772 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 HAUS1Q96CS2 278 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 SERAC1Q96JX3 654 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 PI4K2AQ9BTU6 479 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 DDX56Q9NY93 547 aaKnown RBP16.11■□□□□ 0.17
SMG6-207ENST00000570756 PRR12Q9ULL5 1215 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 SOX13Q9UN79 622 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 PPME1Q9Y570 386 aa16.11■□□□□ 0.17
SMG6-207ENST00000570756 LGR5O75473 907 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 PIAS1O75925 651 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 ZBTB7AO95365 584 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 BBS9Q3SYG4 887 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.1■□□□□ 0.17
SMG6-207ENST00000570756 EFHC1Q5JVL4 640 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 FRMD8P1Q9BZ68 369 aaPredicted RBP16.1■□□□□ 0.17
SMG6-207ENST00000570756 PTTG2Q9NZH5 202 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 TBX20Q9UMR3 447 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 SORCS3Q9UPU3 1222 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 QSER1Q2KHR3 1735 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 A6NJR5 290 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 DDX39AO00148 427 aaKnown RBP16.1■□□□□ 0.17
SMG6-207ENST00000570756 FAM200BP0CF97 657 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 SLURP2P0DP57 97 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 ERFP50548 548 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 TMPRSS15P98073 1019 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 ZNF200P98182 395 aaPredicted RBP16.1■□□□□ 0.17
SMG6-207ENST00000570756 USP4Q13107 963 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 SHROOM1Q2M3G4 852 aaPredicted RBP16.1■□□□□ 0.17
SMG6-207ENST00000570756 TMEM259Q4ZIN3 620 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 MDH1BQ5I0G3 518 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 PASD1Q8IV76 773 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 ARID3BQ8IVW6 561 aaPredicted RBP16.1■□□□□ 0.17
SMG6-207ENST00000570756 ABRAQ8N0Z2 381 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 SLC35B2Q8TB61 432 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 SLC44A1Q8WWI5 657 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 JADE3Q92613 823 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 ELMO3Q96BJ8 720 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 DGCR14Q96DF8 476 aaKnown RBP16.1■□□□□ 0.17
SMG6-207ENST00000570756 FBXL18Q96ME1 805 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 DNAAF2Q9NVR5 837 aaKnown RBP16.1■□□□□ 0.17
SMG6-207ENST00000570756 PI4KBQ9UBF8 816 aa16.1■□□□□ 0.17
SMG6-207ENST00000570756 E5RJQ4 531 aa16.09■□□□□ 0.17
SMG6-207ENST00000570756 SERPINA6P08185 405 aa16.09■□□□□ 0.17
SMG6-207ENST00000570756 NFIAQ12857 509 aa16.09■□□□□ 0.17
SMG6-207ENST00000570756 MMEL1Q495T6 779 aa16.09■□□□□ 0.17
SMG6-207ENST00000570756 ANKRD22Q5VYY1 191 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms