RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 CCT6AP40227 531 aaKnown RBP11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 SLC6A11P48066 632 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 PPP2R3AQ06190 1150 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 CYP4F3Q08477 520 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 SMARCB1Q12824 385 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 STRN3Q13033 797 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 ENOX2Q16206 610 aaKnown RBP11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 C9orf57Q5W0N0 161 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 ZPBP2Q6X784 338 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 TMPRSS7Q7RTY8 843 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 RABEPKQ7Z6M1 372 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 GLRX5Q86SX6 157 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 MARCH9Q86YJ5 346 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 SLC41A1Q8IVJ1 513 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 PGBD3Q8N328 593 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 ARL14EPQ8N8R7 260 aaPredicted RBP11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 SH3RF2Q8TEC5 729 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 NTPCRQ9BSD7 190 aaKnown RBP11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 RUSC1Q9BVN2 902 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 TMLHEQ9NVH6 421 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 GCNT4Q9P109 453 aa11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 KIAA1522Q9P206 1035 aaPredicted RBP11.27□□□□□ -0.61
CTDNEP1-202ENST00000570380 MUC22E2RYF6 1773 aaPredicted RBP11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 ZNF462Q96JM2 2506 aa11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 TCRBV21S2A2A0A5A6 115 aa11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 TRABD2BA6NFA1 517 aa11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 PRPF40AO75400 957 aaKnown RBP11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 NOL4O94818 638 aa11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 NFATC1O95644 943 aa11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 ADRB2P07550 413 aa11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 MAPTP10636 758 aaKnown RBP11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 TCF3P15923 654 aa11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 PAX3P23760 479 aa11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 MATR3P43243 847 aaKnown RBP eCLIP11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 KIR2DL1P43626 348 aaPredicted RBP11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 ZXDBP98169 803 aa11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 HSF5Q4G112 596 aaPredicted RBP11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 EOGTQ5NDL2 527 aa11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 WSCD1Q658N2 575 aa11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 HAUS3Q68CZ6 603 aa11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 METTL23Q86XA0 190 aa11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 SCUBE3Q8IX30 993 aa11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 DIS3L2Q8IYB7 885 aaKnown RBP11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 THEM5Q8N1Q8 247 aa11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 TMEM161BQ8NDZ6 487 aa11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 WASF1Q92558 559 aa11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 TRMT2BQ96GJ1 504 aaKnown RBP11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 MYRFLQ96LU7 910 aa11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 DRC1Q96MC2 740 aa11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 PI4K2AQ9BTU6 479 aa11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 DDX19AQ9NUU7 478 aaKnown RBP11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 UXTQ9UBK9 157 aaPredicted RBP11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 DSEQ9UL01 958 aa11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 PCDHB5Q9Y5E4 795 aa11.26□□□□□ -0.61
CTDNEP1-202ENST00000570380 MYO18BQ8IUG5 2567 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 TMEM131Q92545 1883 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 A0A0A0MRY4 1105 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 A0A1W2PQD8 194 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 ANO9A1A5B4 782 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 C2orf78A6NCI8 922 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 MYMKA6NI61 221 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 E9PMD0 336 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 CYB561D2O14569 222 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 ATXN7O15265 892 aaPredicted RBP11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 FAM189A1O60320 539 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 PFKFB2O60825 505 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 CYP17A1P05093 508 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 OR52Z1P0C646 297 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 IRX6P78412 446 aaPredicted RBP11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 SAFBQ15424 915 aaKnown RBP eCLIP11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 DDR2Q16832 855 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 PLEKHG6Q3KR16 790 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 LARP1BQ659C4 914 aaKnown RBP11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 JADE1Q6IE81 842 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 RINT1Q6NUQ1 792 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 SLC36A4Q6YBV0 504 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 C1orf186Q6ZWK4 172 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 ZNF605Q86T29 641 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 DCP1BQ8IZD4 617 aaKnown RBP11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 YTHDC1Q96MU7 727 aaKnown RBP11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 TSPAN18Q96SJ8 248 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 PNKPQ96T60 521 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 PYM1Q9BRP8 204 aaKnown RBP11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 C17orf75Q9HAS0 396 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 PDRG1Q9NUG6 133 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 TOR4AQ9NXH8 423 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 PCOLCE2Q9UKZ9 415 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 ARHGAP26Q9UNA1 814 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 RAI2Q9Y5P3 530 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 KNTC1P50748 2209 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 PTPRQQ9UMZ3 2332 aa11.25□□□□□ -0.61
CTDNEP1-202ENST00000570380 CABIN1Q9Y6J0 2220 aa11.24□□□□□ -0.61
CTDNEP1-202ENST00000570380 IGHV1OR15-9A0A0B4J2B8 117 aa11.24□□□□□ -0.61
CTDNEP1-202ENST00000570380 KAT7O95251 611 aa11.24□□□□□ -0.61
CTDNEP1-202ENST00000570380 APODP05090 189 aa11.24□□□□□ -0.61
CTDNEP1-202ENST00000570380 NFICP08651 508 aa11.24□□□□□ -0.61
CTDNEP1-202ENST00000570380 GABRG2P18507 467 aa11.24□□□□□ -0.61
CTDNEP1-202ENST00000570380 HDCP19113 662 aa11.24□□□□□ -0.61
CTDNEP1-202ENST00000570380 CYP2F1P24903 491 aa11.24□□□□□ -0.61
CTDNEP1-202ENST00000570380 FOSBP53539 338 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms