RNA–Protein interactions for RNA: ENST00000570300.1

NPLOC4-203, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-203ENST00000570300 UBA3Q8TBC4 463 aa11.6□□□□□ -0.55
NPLOC4-203ENST00000570300 SLC2A14Q8TDB8 520 aa11.6□□□□□ -0.55
NPLOC4-203ENST00000570300 COG1Q8WTW3 980 aa11.6□□□□□ -0.55
NPLOC4-203ENST00000570300 TOP1MTQ969P6 601 aa11.6□□□□□ -0.55
NPLOC4-203ENST00000570300 SELENOOQ9BVL4 669 aa11.6□□□□□ -0.55
NPLOC4-203ENST00000570300 CARD6Q9BX69 1037 aa11.6□□□□□ -0.55
NPLOC4-203ENST00000570300 MCOLN1Q9GZU1 580 aa11.6□□□□□ -0.55
NPLOC4-203ENST00000570300 RC3H2Q9HBD1 1191 aaKnown RBP11.6□□□□□ -0.55
NPLOC4-203ENST00000570300 CSNK1G1Q9HCP0 422 aa11.6□□□□□ -0.55
NPLOC4-203ENST00000570300 PNPLA8Q9NP80 782 aa11.6□□□□□ -0.55
NPLOC4-203ENST00000570300 CRTAC1Q9NQ79 661 aa11.6□□□□□ -0.55
NPLOC4-203ENST00000570300 CACNG4Q9UBN1 327 aa11.6□□□□□ -0.55
NPLOC4-203ENST00000570300 COL4A6Q14031 1691 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 CTAGE15A4D2H0 777 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 NRP1O14786 923 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 PSTPIP1O43586 416 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 ITGB1P05556 798 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 CTAGE8P0CG41 777 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 KRT3P12035 628 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 NPR3P17342 541 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 FGFR3P22607 806 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 SSTR3P32745 418 aaPredicted RBP11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 PAFAH1B1P43034 410 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 BRCC3P46736 316 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 RPL7AP62424 266 aaKnown RBP11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 INTS6LQ5JSJ4 861 aaKnown RBP11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 OVOS1Q6IE37 1185 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 DCUN1D2Q6PH85 259 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 DEFB128Q7Z7B8 93 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 CTAGE6Q86UF2 777 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 CTAGE4Q8IX94 777 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 SCML4Q8N228 414 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 ZNF689Q96CS4 500 aaPredicted RBP11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 NCAPGQ9BPX3 1015 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 B3GNT5Q9BYG0 378 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 GOLPH3Q9H4A6 298 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 SYNCQ9H7C4 482 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 FAM49BQ9NUQ9 324 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 DNAJB4Q9UDY4 337 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 TMEM59LQ9UK28 342 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 ADAM28Q9UKQ2 775 aa11.59□□□□□ -0.55
NPLOC4-203ENST00000570300 SF3B1O75533 1304 aaKnown RBP eCLIP11.59□□□□□ -0.554e-6■■■■■ 103.6
NPLOC4-203ENST00000570300 E5RJQ4 531 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 PDE2AO00408 941 aaPredicted RBP11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 DPYSL4O14531 572 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 DYNC1I1O14576 645 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 KCNK3O14649 394 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 HCRTO43612 131 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 SRGAP2O75044 1071 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 ATP2C2O75185 946 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 TADA2AO75478 443 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 GABBR2O75899 941 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 AMHP03971 560 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 GALTP07902 379 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 FAM200BP0CF97 657 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 CCDC130P13994 396 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 RAG1P15918 1043 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 ITGB8P26012 769 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 TKTP29401 623 aaKnown RBP11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 RFC1P35251 1148 aaPredicted RBP11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 OR1G1P47890 313 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 SLC11A1P49279 550 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 TSPY1Q01534 308 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 SLC6A3Q01959 620 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 YWHAHQ04917 246 aaPredicted RBP11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 SMARCB1Q12824 385 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 C2CD6Q53TS8 623 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 LLGL2Q6P1M3 1020 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 OLFML1Q6UWY5 402 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 SLC26A9Q7LBE3 791 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 POLNQ7Z5Q5 900 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 RABGGTAQ92696 567 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 PCED1BQ96HM7 432 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 FUBP3Q96I24 572 aaKnown RBP eCLIP11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 NAP1L3Q99457 506 aaPredicted RBP11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 TRIM7Q9C029 511 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 IL23AQ9NPF7 189 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 ASNSD1Q9NWL6 643 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 MARCH5Q9NX47 278 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 CHORDC1Q9UHD1 332 aaPredicted RBP11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 FAN1Q9Y2M0 1017 aa11.58□□□□□ -0.56
NPLOC4-203ENST00000570300 PTPRDP23468 1912 aa11.57□□□□□ -0.56
NPLOC4-203ENST00000570300 UQCRHLA0A096LP55 91 aa11.57□□□□□ -0.56
NPLOC4-203ENST00000570300 MYBPHLA2RUH7 354 aa11.57□□□□□ -0.56
NPLOC4-203ENST00000570300 OR6C75A6NL08 312 aa11.57□□□□□ -0.56
NPLOC4-203ENST00000570300 C2CD4BA6NLJ0 364 aa11.57□□□□□ -0.56
NPLOC4-203ENST00000570300 TBKBP1A7MCY6 615 aa11.57□□□□□ -0.56
NPLOC4-203ENST00000570300 PGRMC1O00264 195 aaKnown RBP11.57□□□□□ -0.56
NPLOC4-203ENST00000570300 TULP2O00295 520 aa11.57□□□□□ -0.56
NPLOC4-203ENST00000570300 ZNF185O15231 689 aa11.57□□□□□ -0.56
NPLOC4-203ENST00000570300 PAPSS1O43252 624 aaPredicted RBP11.57□□□□□ -0.56
NPLOC4-203ENST00000570300 SPOPO43791 374 aa11.57□□□□□ -0.56
NPLOC4-203ENST00000570300 TBC1D4O60343 1298 aa11.57□□□□□ -0.56
NPLOC4-203ENST00000570300 FBXO21O94952 628 aa11.57□□□□□ -0.56
NPLOC4-203ENST00000570300 TUBBP07437 444 aa11.57□□□□□ -0.56
NPLOC4-203ENST00000570300 UQCRHP07919 91 aa11.57□□□□□ -0.56
NPLOC4-203ENST00000570300 GLI1P08151 1106 aa11.57□□□□□ -0.56
NPLOC4-203ENST00000570300 CSF2RAP15509 400 aa11.57□□□□□ -0.56
NPLOC4-203ENST00000570300 ACAT1P24752 427 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms