RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 PSMA2P25787 234 aa23.74■■□□□ 1.39
VCPKMT-205ENST00000569518 ADORA2BP29275 332 aa23.74■■□□□ 1.39
VCPKMT-205ENST00000569518 CLLU1OSQ5K130 101 aa23.74■■□□□ 1.39
VCPKMT-205ENST00000569518 FAM102AQ5T9C2 384 aaPredicted RBP23.74■■□□□ 1.39
VCPKMT-205ENST00000569518 KIAA0319Q5VV43 1072 aa23.74■■□□□ 1.39
VCPKMT-205ENST00000569518 OLFML1Q6UWY5 402 aa23.74■■□□□ 1.39
VCPKMT-205ENST00000569518 EMC1Q8N766 993 aa23.74■■□□□ 1.39
VCPKMT-205ENST00000569518 EXD1Q8NHP7 514 aa23.74■■□□□ 1.39
VCPKMT-205ENST00000569518 PIWIL1Q96J94 861 aaKnown RBP23.74■■□□□ 1.39
VCPKMT-205ENST00000569518 HINFPQ9BQA5 517 aa23.74■■□□□ 1.39
VCPKMT-205ENST00000569518 ACAT1P24752 427 aaKnown RBP23.73■■□□□ 1.39
VCPKMT-205ENST00000569518 LHX1P48742 406 aa23.73■■□□□ 1.39
VCPKMT-205ENST00000569518 MNX1P50219 401 aaPredicted RBP23.73■■□□□ 1.39
VCPKMT-205ENST00000569518 CYP1B1Q16678 543 aa23.73■■□□□ 1.39
VCPKMT-205ENST00000569518 CCDC142Q17RM4 750 aa23.73■■□□□ 1.39
VCPKMT-205ENST00000569518 PLEKHG4Q58EX7 1191 aa23.73■■□□□ 1.39
VCPKMT-205ENST00000569518 GLB1LQ6UWU2 654 aa23.73■■□□□ 1.39
VCPKMT-205ENST00000569518 DSTYKQ6XUX3 929 aa23.73■■□□□ 1.39
VCPKMT-205ENST00000569518 FUKQ8N0W3 1084 aa23.73■■□□□ 1.39
VCPKMT-205ENST00000569518 ARFGAP1Q8N6T3 406 aa23.73■■□□□ 1.39
VCPKMT-205ENST00000569518 CYLDQ9NQC7 956 aa23.73■■□□□ 1.39
VCPKMT-205ENST00000569518 DDX43Q9NXZ2 648 aaKnown RBP23.73■■□□□ 1.39
VCPKMT-205ENST00000569518 PIK3R2O00459 728 aa23.73■■□□□ 1.39
VCPKMT-205ENST00000569518 PAX3P23760 479 aa23.73■■□□□ 1.39
VCPKMT-205ENST00000569518 OR6B2Q6IFH4 312 aa23.73■■□□□ 1.39
VCPKMT-205ENST00000569518 HERPUD2Q9BSE4 406 aa23.73■■□□□ 1.39
VCPKMT-205ENST00000569518 CRTAC1Q9NQ79 661 aa23.73■■□□□ 1.39
VCPKMT-205ENST00000569518 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.73■■□□□ 1.39
VCPKMT-205ENST00000569518 AMACRQ9UHK6 382 aa23.73■■□□□ 1.39
VCPKMT-205ENST00000569518 ZSCAN5CA6NGD5 496 aaPredicted RBP23.72■■□□□ 1.39
VCPKMT-205ENST00000569518 PAPSS1O43252 624 aaPredicted RBP23.72■■□□□ 1.39
VCPKMT-205ENST00000569518 PHF2O75151 1096 aa23.72■■□□□ 1.39
VCPKMT-205ENST00000569518 LRCH4O75427 683 aa23.72■■□□□ 1.39
VCPKMT-205ENST00000569518 B3GAT3O94766 335 aa23.72■■□□□ 1.39
VCPKMT-205ENST00000569518 SSR1P43307 286 aaKnown RBP23.72■■□□□ 1.39
VCPKMT-205ENST00000569518 TRNP1Q6NT89 227 aa23.72■■□□□ 1.39
VCPKMT-205ENST00000569518 PAQR9Q6ZVX9 377 aa23.72■■□□□ 1.39
VCPKMT-205ENST00000569518 SPATA18Q8TC71 538 aa23.72■■□□□ 1.39
VCPKMT-205ENST00000569518 FUT8Q9BYC5 575 aa23.72■■□□□ 1.39
VCPKMT-205ENST00000569518 CRISPLD2Q9H0B8 497 aa23.72■■□□□ 1.39
VCPKMT-205ENST00000569518 C2CD4BA6NLJ0 364 aa23.71■■□□□ 1.39
VCPKMT-205ENST00000569518 M0QZQ0 153 aa23.71■■□□□ 1.39
VCPKMT-205ENST00000569518 B4GALT3O60512 393 aa23.71■■□□□ 1.39
VCPKMT-205ENST00000569518 CYP11A1P05108 521 aa23.71■■□□□ 1.39
VCPKMT-205ENST00000569518 RARAP10276 462 aa23.71■■□□□ 1.39
VCPKMT-205ENST00000569518 COL6A1P12109 1028 aa23.71■■□□□ 1.39
VCPKMT-205ENST00000569518 PLA2G4AP47712 749 aa23.71■■□□□ 1.39
VCPKMT-205ENST00000569518 SNX16P57768 344 aa23.71■■□□□ 1.39
VCPKMT-205ENST00000569518 GUCY2DQ02846 1103 aa23.71■■□□□ 1.39
VCPKMT-205ENST00000569518 SLC25A11Q02978 314 aaKnown RBP23.71■■□□□ 1.39
VCPKMT-205ENST00000569518 DSC1Q08554 894 aa23.71■■□□□ 1.39
VCPKMT-205ENST00000569518 ANKRD33Q7Z3H0 272 aa23.71■■□□□ 1.39
VCPKMT-205ENST00000569518 POLNQ7Z5Q5 900 aa23.71■■□□□ 1.39
VCPKMT-205ENST00000569518 ZDHHC17Q8IUH5 632 aa23.71■■□□□ 1.39
VCPKMT-205ENST00000569518 IFT20Q8IY31 132 aa23.71■■□□□ 1.39
VCPKMT-205ENST00000569518 C12orf50Q8NA57 414 aaPredicted RBP23.71■■□□□ 1.39
VCPKMT-205ENST00000569518 KHSRPQ92945 711 aaKnown RBP eCLIP23.71■■□□□ 1.391e-6■■□□□ 11.9
VCPKMT-205ENST00000569518 TIMM13Q9Y5L4 95 aaPredicted RBP23.71■■□□□ 1.39
VCPKMT-205ENST00000569518 ATP8B1O43520 1251 aa23.7■■□□□ 1.39
VCPKMT-205ENST00000569518 PQBP1O60828 265 aaKnown RBP23.7■■□□□ 1.39
VCPKMT-205ENST00000569518 ODC1P11926 461 aa23.7■■□□□ 1.39
VCPKMT-205ENST00000569518 ZNF143P52747 638 aaPredicted RBP23.7■■□□□ 1.39
VCPKMT-205ENST00000569518 SLC6A3Q01959 620 aa23.7■■□□□ 1.39
VCPKMT-205ENST00000569518 ACAP1Q15027 740 aa23.7■■□□□ 1.39
VCPKMT-205ENST00000569518 MAP9Q49MG5 647 aa23.7■■□□□ 1.39
VCPKMT-205ENST00000569518 TXNRD3NBQ6F5E7 133 aa23.7■■□□□ 1.39
VCPKMT-205ENST00000569518 FAM43BQ6ZT52 329 aaPredicted RBP23.7■■□□□ 1.39
VCPKMT-205ENST00000569518 GSPT2Q8IYD1 628 aaKnown RBP23.7■■□□□ 1.39
VCPKMT-205ENST00000569518 DBF4BQ8NFT6 615 aa23.7■■□□□ 1.39
VCPKMT-205ENST00000569518 CCDC26Q8TAB7 109 aa23.7■■□□□ 1.39
VCPKMT-205ENST00000569518 AENQ8WTP8 325 aaKnown RBP23.7■■□□□ 1.39
VCPKMT-205ENST00000569518 SYT15Q9BQS2 421 aa23.7■■□□□ 1.39
VCPKMT-205ENST00000569518 PLEKHA4Q9H4M7 779 aa23.7■■□□□ 1.39
VCPKMT-205ENST00000569518 EPB41L5Q9HCM4 733 aa23.7■■□□□ 1.39
VCPKMT-205ENST00000569518 TMEM161AQ9NX61 479 aa23.7■■□□□ 1.39
VCPKMT-205ENST00000569518 MTUS1Q9ULD2 1270 aa23.7■■□□□ 1.39
VCPKMT-205ENST00000569518 CHRNA3P32297 505 aa23.7■■□□□ 1.38
VCPKMT-205ENST00000569518 GJC1P36383 396 aa23.7■■□□□ 1.38
VCPKMT-205ENST00000569518 KLF1Q13351 362 aaPredicted RBP23.7■■□□□ 1.38
VCPKMT-205ENST00000569518 ATP13A4Q4VNC1 1196 aa23.7■■□□□ 1.38
VCPKMT-205ENST00000569518 MDH1BQ5I0G3 518 aa23.7■■□□□ 1.38
VCPKMT-205ENST00000569518 NOMO2Q5JPE7 1267 aa23.7■■□□□ 1.38
VCPKMT-205ENST00000569518 DCLRE1AQ6PJP8 1040 aa23.7■■□□□ 1.38
VCPKMT-205ENST00000569518 MAATS1Q7Z4T9 603 aa23.7■■□□□ 1.38
VCPKMT-205ENST00000569518 ANKS1BQ7Z6G8 1248 aa23.7■■□□□ 1.38
VCPKMT-205ENST00000569518 HSFY1Q96LI6 401 aa23.7■■□□□ 1.38
VCPKMT-205ENST00000569518 RTP3Q9BQQ7 232 aa23.7■■□□□ 1.38
VCPKMT-205ENST00000569518 DUSP16Q9BY84 665 aa23.7■■□□□ 1.38
VCPKMT-205ENST00000569518 TET1Q8NFU7 2136 aa23.7■■□□□ 1.38
VCPKMT-205ENST00000569518 I3L4J1 428 aa23.69■■□□□ 1.38
VCPKMT-205ENST00000569518 XPO1O14980 1071 aaKnown RBP23.69■■□□□ 1.38
VCPKMT-205ENST00000569518 SASH3O75995 380 aa23.69■■□□□ 1.38
VCPKMT-205ENST00000569518 FLT3P36888 993 aa23.69■■□□□ 1.38
VCPKMT-205ENST00000569518 SCNN1AP37088 669 aa23.69■■□□□ 1.38
VCPKMT-205ENST00000569518 BRCC3P46736 316 aa23.69■■□□□ 1.38
VCPKMT-205ENST00000569518 PLCB3Q01970 1234 aa23.69■■□□□ 1.38
VCPKMT-205ENST00000569518 PAN2Q504Q3 1202 aaKnown RBP23.69■■□□□ 1.38
VCPKMT-205ENST00000569518 SCUBE3Q8IX30 993 aa23.69■■□□□ 1.38
VCPKMT-205ENST00000569518 RCOR2Q8IZ40 523 aa23.69■■□□□ 1.38
VCPKMT-205ENST00000569518 CASKIN2Q8WXE0 1202 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms