RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 SLC25A18Q9H1K4 315 aa7.23□□□□□ -1.25
HERPUD1-217ENST00000569429 MIR1-1HGQ9H1L0 117 aa7.23□□□□□ -1.25
HERPUD1-217ENST00000569429 CD248Q9HCU0 757 aa7.23□□□□□ -1.25
HERPUD1-217ENST00000569429 ASCL3Q9NQ33 180 aa7.23□□□□□ -1.25
HERPUD1-217ENST00000569429 TMPRSS4Q9NRS4 437 aa7.23□□□□□ -1.25
HERPUD1-217ENST00000569429 SNX11Q9Y5W9 270 aa7.23□□□□□ -1.25
HERPUD1-217ENST00000569429 RP1P56715 2156 aa7.23□□□□□ -1.25
HERPUD1-217ENST00000569429 RTTNQ86VV8 2226 aa7.23□□□□□ -1.25
HERPUD1-217ENST00000569429 DIDO1Q9BTC0 2240 aaKnown RBP7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 A0A1W2PQF6 199 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 MTMR11A4FU01 709 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 OR6C75A6NL08 312 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 METTL12A8MUP2 240 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 N4BP3O15049 544 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 DFNA5O60443 496 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 OR4Q2P0C623 313 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 NCAM1P13591 858 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 TCF3P15923 654 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 CD6P30203 668 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 LSSP48449 732 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 AFF3P51826 1226 aaKnown RBP7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 NLRP12P59046 1061 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 ASIC1P78348 528 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 YWHAHQ04917 246 aaPredicted RBP7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 SOX4Q06945 474 aaPredicted RBP7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 MESP2Q0VG99 397 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 CAPSQ13938 189 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 VEPH1Q14D04 833 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 NCAPHQ15003 741 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 DCAF12L1Q5VU92 463 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 JAKMIP3Q5VZ66 844 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 TXNDC8Q6A555 127 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 IGF2-ASQ6U949 168 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 METTL3Q86U44 580 aaKnown RBP7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 ATAD1Q8NBU5 361 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 CCDC97Q96F63 343 aaPredicted RBP7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 VCPIP1Q96JH7 1222 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 MTRQ99707 1265 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 LINC00597Q9H2U6 94 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 TMEM206Q9H813 350 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 ZDHHC4Q9NPG8 344 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 CD93Q9NPY3 652 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 THSD1Q9NS62 852 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 WSB2Q9NYS7 404 aaPredicted RBP7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 PCDHB8Q9UN66 801 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 NUB1Q9Y5A7 615 aa7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 PRRC2CQ9Y520 2896 aaKnown RBP7.22□□□□□ -1.25
HERPUD1-217ENST00000569429 SMIM28A0A1B0GU29 152 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 H0Y8X5 98 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 hCG_1984214I3L0E3 225 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 CBX4O00257 560 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 DKC1O60832 514 aaKnown RBP eCLIP7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 SOAT2O75908 522 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 MPOP05164 745 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 FAM87AP0C7U9 286 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 HOXB2P14652 356 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 ATF6P18850 670 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 MARCKSP29966 332 aaPredicted RBP7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 RPL9P32969 192 aaKnown RBP7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 DCTP40126 519 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 GRIA2P42262 883 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 QARSP47897 775 aaKnown RBP7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 SLC6A11P48066 632 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 TUFMP49411 452 aaKnown RBP7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 CSNK1EP49674 416 aaKnown RBP7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 OXCT1P55809 520 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 GABREP78334 506 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 INSM1Q01101 510 aaPredicted RBP7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 MYBPC2Q14324 1141 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 FAM187BQ17R55 369 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 SGO2Q562F6 1265 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 XKR4Q5GH76 650 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 ZNF787Q6DD87 383 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 TMTC3Q6ZXV5 915 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 NOSTRINQ8IVI9 506 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 SRRM1Q8IYB3 904 aaKnown RBP7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 CCDC82Q8N4S0 544 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 TTC9BQ8N6N2 239 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 ZNF713Q8N859 430 aaPredicted RBP7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 IPO4Q8TEX9 1081 aaKnown RBP7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 MRPS31Q92665 395 aaKnown RBP7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 EXTL1Q92935 676 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 TOE1Q96GM8 510 aaKnown RBP7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 ADPGKQ9BRR6 497 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 PDZD7Q9H5P4 517 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 POLR1BQ9H9Y6 1135 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 OSGEPQ9NPF4 335 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 XPNPEP1Q9NQW7 623 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 BMP2KQ9NSY1 1161 aaPredicted RBP7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 SLC38A7Q9NVC3 462 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 PRMT7Q9NVM4 692 aaPredicted RBP7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 ADAMTS1Q9UHI8 967 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 EIF2B4Q9UI10 523 aaKnown RBP7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 ANKRD6Q9Y2G4 727 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 GDAQ9Y2T3 454 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 PCDHB1Q9Y5F3 818 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 FN1P02751 2386 aaKnown RBP7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 TCHHQ07283 1943 aa7.21□□□□□ -1.26
HERPUD1-217ENST00000569429 A0A1B0GTQ1 180 aa7.2□□□□□ -1.26
HERPUD1-217ENST00000569429 EFSO43281 561 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms