RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 CCDC142Q17RM4 750 aa9.67□□□□□ -0.86
CHD9-219ENST00000569225 DPY19L2P1Q6NXN4 242 aa9.67□□□□□ -0.86
CHD9-219ENST00000569225 SARM1Q6SZW1 724 aa9.67□□□□□ -0.86
CHD9-219ENST00000569225 FAM71AQ8IYT1 594 aa9.67□□□□□ -0.86
CHD9-219ENST00000569225 FUKQ8N0W3 1084 aa9.67□□□□□ -0.86
CHD9-219ENST00000569225 C8orf48Q96LL4 319 aa9.67□□□□□ -0.86
CHD9-219ENST00000569225 LPIN3Q9BQK8 851 aa9.67□□□□□ -0.86
CHD9-219ENST00000569225 APOL5Q9BWW9 433 aa9.67□□□□□ -0.86
CHD9-219ENST00000569225 EDEM3Q9BZQ6 932 aa9.67□□□□□ -0.86
CHD9-219ENST00000569225 XPO4Q9C0E2 1151 aaKnown RBP9.67□□□□□ -0.86
CHD9-219ENST00000569225 S1PR5Q9H228 398 aa9.67□□□□□ -0.86
CHD9-219ENST00000569225 CRISPLD1Q9H336 500 aa9.67□□□□□ -0.86
CHD9-219ENST00000569225 TSC2P49815 1807 aa9.67□□□□□ -0.86
CHD9-219ENST00000569225 FOXN3O00409 490 aaPredicted RBP9.66□□□□□ -0.86
CHD9-219ENST00000569225 CLDN5O00501 218 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 CCDC172P0C7W6 258 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 CSH1P0DML2 217 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 CSH2P0DML3 217 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 PTPN2P17706 415 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 GNA15P30679 374 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 CDR1P51861 262 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 CYP4A22Q5TCH4 519 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 GAS2L3Q86XJ1 694 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 TTC9BQ8N6N2 239 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 PSMG2Q969U7 264 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 ZNF707Q96C28 371 aaPredicted RBP9.66□□□□□ -0.86
CHD9-219ENST00000569225 SPATA17Q96L03 361 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 TRIM5Q9C035 493 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 NLRC4Q9NPP4 1024 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 ASAH2Q9NR71 780 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 MYO6Q9UM54 1294 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 USP15Q9Y4E8 981 aaPredicted RBP9.66□□□□□ -0.86
CHD9-219ENST00000569225 F8VP50 259 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 O00370 1275 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 EPHB6O15197 1021 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 CYP26A1O43174 497 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 THAP12O43422 761 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 SOAT2O75908 522 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 TPM1P09493 284 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 NPR3P17342 541 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 ATF6P18850 670 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 SOX5P35711 763 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 BCAT1P54687 386 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 CNGA2Q16280 664 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 MEA1Q16626 185 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 DDR2Q16832 855 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 GOLGA7BQ2TAP0 167 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 PABPC1LQ4VXU2 614 aaKnown RBP9.66□□□□□ -0.86
CHD9-219ENST00000569225 FIGNQ5HY92 759 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 PPP1R26Q5T8A7 1209 aaPredicted RBP9.66□□□□□ -0.86
CHD9-219ENST00000569225 LCLAT1Q6UWP7 414 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 ANKRD52Q8NB46 1076 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 ZNF397Q8NF99 534 aaPredicted RBP9.66□□□□□ -0.86
CHD9-219ENST00000569225 ATXN2LQ8WWM7 1075 aaKnown RBP9.66□□□□□ -0.86
CHD9-219ENST00000569225 GCNAQ96QF7 691 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 DUSP16Q9BY84 665 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 NUCKS1Q9H1E3 243 aaKnown RBP9.66□□□□□ -0.86
CHD9-219ENST00000569225 UXTQ9UBK9 157 aaPredicted RBP9.66□□□□□ -0.86
CHD9-219ENST00000569225 AJAP1Q9UKB5 411 aaPredicted RBP9.66□□□□□ -0.86
CHD9-219ENST00000569225 TSPAN16Q9UKR8 245 aa9.66□□□□□ -0.86
CHD9-219ENST00000569225 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.66□□□□□ -0.861e-7■□□□□ 11
CHD9-219ENST00000569225 ITIH6Q6UXX5 1313 aa9.65□□□□□ -0.86
CHD9-219ENST00000569225 RNF225M0QZC1 329 aaPredicted RBP9.65□□□□□ -0.86
CHD9-219ENST00000569225 ZNF197O14709 1029 aa9.65□□□□□ -0.86
CHD9-219ENST00000569225 RTN3O95197 1032 aaPredicted RBP9.65□□□□□ -0.86
CHD9-219ENST00000569225 SETSIPP0DME0 302 aa9.65□□□□□ -0.86
CHD9-219ENST00000569225 BRD2P25440 801 aaKnown RBP9.65□□□□□ -0.86
CHD9-219ENST00000569225 PBX1P40424 430 aa9.65□□□□□ -0.86
CHD9-219ENST00000569225 PDE6CP51160 858 aa9.65□□□□□ -0.86
CHD9-219ENST00000569225 MAP3K7CLP57077 242 aa9.65□□□□□ -0.86
CHD9-219ENST00000569225 JAM2P57087 298 aa9.65□□□□□ -0.86
CHD9-219ENST00000569225 MRPS5P82675 430 aaKnown RBP9.65□□□□□ -0.86
CHD9-219ENST00000569225 BST2Q10589 180 aaKnown RBP9.65□□□□□ -0.86
CHD9-219ENST00000569225 TRIM14Q14142 442 aa9.65□□□□□ -0.86
CHD9-219ENST00000569225 CBX2Q14781 532 aaPredicted RBP9.65□□□□□ -0.86
CHD9-219ENST00000569225 SPECC1LQ69YQ0 1117 aa9.65□□□□□ -0.86
CHD9-219ENST00000569225 PTCRAQ6ISU1 281 aaPredicted RBP9.65□□□□□ -0.86
CHD9-219ENST00000569225 DENND5BQ6ZUT9 1274 aa9.65□□□□□ -0.86
CHD9-219ENST00000569225 PAQR9Q6ZVX9 377 aa9.65□□□□□ -0.86
CHD9-219ENST00000569225 PDZD4Q76G19 769 aaPredicted RBP9.65□□□□□ -0.86
CHD9-219ENST00000569225 GRASPQ7Z6J2 395 aaPredicted RBP9.65□□□□□ -0.86
CHD9-219ENST00000569225 DNAJB7Q7Z6W7 309 aaPredicted RBP9.65□□□□□ -0.86
CHD9-219ENST00000569225 GIPC2Q8TF65 315 aa9.65□□□□□ -0.86
CHD9-219ENST00000569225 CORO1BQ9BR76 489 aa9.65□□□□□ -0.86
CHD9-219ENST00000569225 UBXN6Q9BZV1 441 aa9.65□□□□□ -0.86
CHD9-219ENST00000569225 GPR88Q9GZN0 384 aa9.65□□□□□ -0.86
CHD9-219ENST00000569225 CSNK1G1Q9HCP0 422 aa9.65□□□□□ -0.86
CHD9-219ENST00000569225 WDR6Q9NNW5 1121 aaKnown RBP9.65□□□□□ -0.86
CHD9-219ENST00000569225 PNPLA8Q9NP80 782 aa9.65□□□□□ -0.86
CHD9-219ENST00000569225 AVENQ9NQS1 362 aaPredicted RBP9.65□□□□□ -0.86
CHD9-219ENST00000569225 COMMD8Q9NX08 183 aa9.65□□□□□ -0.86
CHD9-219ENST00000569225 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.65□□□□□ -0.86
CHD9-219ENST00000569225 CEP83Q9Y592 693 aa9.65□□□□□ -0.86
CHD9-219ENST00000569225 CLUHO75153 1309 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 A0A1W2PQJ5 194 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 SLC38A8A6NNN8 435 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 M0QYV0 167 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 MBTPS2O43462 519 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 GFPT2O94808 682 aa9.64□□□□□ -0.87
CHD9-219ENST00000569225 FERP16591 822 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms