RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 KIAA0391O15091 583 aaKnown RBP16.88■□□□□ 0.29
HERPUD1-215ENST00000568676 CEACAM1P13688 526 aa16.88■□□□□ 0.29
HERPUD1-215ENST00000568676 HDCP19113 662 aa16.88■□□□□ 0.29
HERPUD1-215ENST00000568676 CSRP1P21291 193 aaKnown RBP16.88■□□□□ 0.29
HERPUD1-215ENST00000568676 PPP3CCP48454 512 aa16.88■□□□□ 0.29
HERPUD1-215ENST00000568676 MYO1EQ12965 1108 aa16.88■□□□□ 0.29
HERPUD1-215ENST00000568676 HSF5Q4G112 596 aaPredicted RBP16.88■□□□□ 0.29
HERPUD1-215ENST00000568676 SDHAF4Q5VUM1 108 aa16.88■□□□□ 0.29
HERPUD1-215ENST00000568676 ADGRF2Q8IZF7 708 aa16.88■□□□□ 0.29
HERPUD1-215ENST00000568676 CSGALNACT2Q8N6G5 542 aa16.88■□□□□ 0.29
HERPUD1-215ENST00000568676 SH3RF2Q8TEC5 729 aa16.88■□□□□ 0.29
HERPUD1-215ENST00000568676 EZH1Q92800 747 aaPredicted RBP16.88■□□□□ 0.29
HERPUD1-215ENST00000568676 TMX3Q96JJ7 454 aa16.88■□□□□ 0.29
HERPUD1-215ENST00000568676 CNOT6LQ96LI5 555 aaKnown RBP16.88■□□□□ 0.29
HERPUD1-215ENST00000568676 CYP2S1Q96SQ9 504 aa16.88■□□□□ 0.29
HERPUD1-215ENST00000568676 TMEM9BQ9NQ34 198 aa16.88■□□□□ 0.29
HERPUD1-215ENST00000568676 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.88■□□□□ 0.29
HERPUD1-215ENST00000568676 SNX9Q9Y5X1 595 aa16.88■□□□□ 0.29
HERPUD1-215ENST00000568676 TMEM8BA6NDV4 472 aa16.87■□□□□ 0.29
HERPUD1-215ENST00000568676 C4orf47A7E2U8 309 aa16.87■□□□□ 0.29
HERPUD1-215ENST00000568676 DCLK1O15075 740 aa16.87■□□□□ 0.29
HERPUD1-215ENST00000568676 ALDH1A2O94788 518 aa16.87■□□□□ 0.29
HERPUD1-215ENST00000568676 DPP6P42658 865 aa16.87■□□□□ 0.29
HERPUD1-215ENST00000568676 MRPS21P82921 87 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-215ENST00000568676 SF3A1Q15459 793 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-215ENST00000568676 LARP1BQ659C4 914 aaKnown RBP16.87■□□□□ 0.29
HERPUD1-215ENST00000568676 TCEAL6Q6IPX3 200 aa16.87■□□□□ 0.29
HERPUD1-215ENST00000568676 FAM171BQ6P995 826 aa16.87■□□□□ 0.29
HERPUD1-215ENST00000568676 ARL14EPQ8N8R7 260 aaPredicted RBP16.87■□□□□ 0.29
HERPUD1-215ENST00000568676 CXorf38Q8TB03 319 aa16.87■□□□□ 0.29
HERPUD1-215ENST00000568676 USP33Q8TEY7 942 aa16.87■□□□□ 0.29
HERPUD1-215ENST00000568676 TCEAL3Q969E4 200 aa16.87■□□□□ 0.29
HERPUD1-215ENST00000568676 SLC22A12Q96S37 553 aa16.87■□□□□ 0.29
HERPUD1-215ENST00000568676 MAGEC2Q9UBF1 373 aaPredicted RBP16.87■□□□□ 0.29
HERPUD1-215ENST00000568676 MMP17Q9ULZ9 603 aa16.87■□□□□ 0.29
HERPUD1-215ENST00000568676 SMC3Q9UQE7 1217 aa16.87■□□□□ 0.29
HERPUD1-215ENST00000568676 SLC9A3R1O14745 358 aaPredicted RBP16.86■□□□□ 0.29
HERPUD1-215ENST00000568676 KRT19P08727 400 aa16.86■□□□□ 0.29
HERPUD1-215ENST00000568676 TMEM191BP0C7N4 346 aa16.86■□□□□ 0.29
HERPUD1-215ENST00000568676 ACAT1P24752 427 aaKnown RBP16.86■□□□□ 0.29
HERPUD1-215ENST00000568676 TXLNAP40222 546 aa16.86■□□□□ 0.29
HERPUD1-215ENST00000568676 EIF2DP41214 584 aaKnown RBP16.86■□□□□ 0.29
HERPUD1-215ENST00000568676 LMBRD2Q68DH5 695 aaPredicted RBP16.86■□□□□ 0.29
HERPUD1-215ENST00000568676 NAIF1Q69YI7 327 aaPredicted RBP16.86■□□□□ 0.29
HERPUD1-215ENST00000568676 UNQ6494/PRO21346Q6UXR6 183 aa16.86■□□□□ 0.29
HERPUD1-215ENST00000568676 SV2BQ7L1I2 683 aa16.86■□□□□ 0.29
HERPUD1-215ENST00000568676 DYMQ7RTS9 669 aa16.86■□□□□ 0.29
HERPUD1-215ENST00000568676 CYP2U1Q7Z449 544 aa16.86■□□□□ 0.29
HERPUD1-215ENST00000568676 SCN4BQ8IWT1 228 aa16.86■□□□□ 0.29
HERPUD1-215ENST00000568676 SYCP3Q8IZU3 236 aa16.86■□□□□ 0.29
HERPUD1-215ENST00000568676 STKLD1Q8NE28 680 aa16.86■□□□□ 0.29
HERPUD1-215ENST00000568676 ANKRD36BP1Q96IX9 119 aa16.86■□□□□ 0.29
HERPUD1-215ENST00000568676 POLR3BQ9NW08 1133 aaPredicted RBP16.86■□□□□ 0.29
HERPUD1-215ENST00000568676 TRPM5Q9NZQ8 1165 aa16.86■□□□□ 0.29
HERPUD1-215ENST00000568676 EVLQ9UI08 416 aaPredicted RBP16.86■□□□□ 0.29
HERPUD1-215ENST00000568676 CDH9Q9ULB4 789 aa16.86■□□□□ 0.29
HERPUD1-215ENST00000568676 SDK1Q7Z5N4 2213 aa16.86■□□□□ 0.29
HERPUD1-215ENST00000568676 KIAA1549LQ6ZVL6 1849 aa16.85■□□□□ 0.29
HERPUD1-215ENST00000568676 C2orf78A6NCI8 922 aa16.85■□□□□ 0.29
HERPUD1-215ENST00000568676 MYMKA6NI61 221 aa16.85■□□□□ 0.29
HERPUD1-215ENST00000568676 GCNT3O95395 438 aa16.85■□□□□ 0.29
HERPUD1-215ENST00000568676 ANXA13P27216 316 aa16.85■□□□□ 0.29
HERPUD1-215ENST00000568676 GRIN1Q05586 938 aa16.85■□□□□ 0.29
HERPUD1-215ENST00000568676 ZNF252P-AS1Q0IIN9 211 aa16.85■□□□□ 0.29
HERPUD1-215ENST00000568676 LMAN2Q12907 356 aa16.85■□□□□ 0.29
HERPUD1-215ENST00000568676 BYSLQ13895 437 aaKnown RBP16.85■□□□□ 0.29
HERPUD1-215ENST00000568676 SURF1Q15526 300 aa16.85■□□□□ 0.29
HERPUD1-215ENST00000568676 CRY1Q16526 586 aa16.85■□□□□ 0.29
HERPUD1-215ENST00000568676 SOWAHAQ2M3V2 549 aa16.85■□□□□ 0.29
HERPUD1-215ENST00000568676 SPDYCQ5MJ68 293 aa16.85■□□□□ 0.29
HERPUD1-215ENST00000568676 DENND5BQ6ZUT9 1274 aa16.85■□□□□ 0.29
HERPUD1-215ENST00000568676 KDF1Q8NAX2 398 aaPredicted RBP16.85■□□□□ 0.29
HERPUD1-215ENST00000568676 TTC16Q8NEE8 873 aa16.85■□□□□ 0.29
HERPUD1-215ENST00000568676 SAAL1Q96ER3 474 aa16.85■□□□□ 0.29
HERPUD1-215ENST00000568676 CFAP47Q6ZTR5 3102 aa16.84■□□□□ 0.29
HERPUD1-215ENST00000568676 K7EQS6 105 aa16.84■□□□□ 0.29
HERPUD1-215ENST00000568676 TRIM66O15016 1216 aa16.84■□□□□ 0.29
HERPUD1-215ENST00000568676 CENPBP07199 599 aaPredicted RBP16.84■□□□□ 0.29
HERPUD1-215ENST00000568676 OPRD1P41143 372 aa16.84■□□□□ 0.29
HERPUD1-215ENST00000568676 WNT7BP56706 349 aa16.84■□□□□ 0.29
HERPUD1-215ENST00000568676 SLC7A9P82251 487 aa16.84■□□□□ 0.29
HERPUD1-215ENST00000568676 KCNA1Q09470 495 aa16.84■□□□□ 0.29
HERPUD1-215ENST00000568676 C2orf27AQ580R0 203 aa16.84■□□□□ 0.29
HERPUD1-215ENST00000568676 SH3PXD2AQ5TCZ1 1133 aa16.84■□□□□ 0.29
HERPUD1-215ENST00000568676 RRAGBQ5VZM2 374 aa16.84■□□□□ 0.29
HERPUD1-215ENST00000568676 ANO7Q6IWH7 933 aa16.84■□□□□ 0.29
HERPUD1-215ENST00000568676 LIMS2Q7Z4I7 341 aa16.84■□□□□ 0.29
HERPUD1-215ENST00000568676 OSTM1Q86WC4 334 aa16.84■□□□□ 0.29
HERPUD1-215ENST00000568676 DDX42Q86XP3 938 aaKnown RBP eCLIP16.84■□□□□ 0.292e-8■■■■■ 39.1
HERPUD1-215ENST00000568676 GPD1LQ8N335 351 aa16.84■□□□□ 0.29
HERPUD1-215ENST00000568676 DNAJC19Q96DA6 116 aa16.84■□□□□ 0.29
HERPUD1-215ENST00000568676 SPACA7Q96KW9 195 aa16.84■□□□□ 0.29
HERPUD1-215ENST00000568676 SYT15Q9BQS2 421 aa16.84■□□□□ 0.29
HERPUD1-215ENST00000568676 TTLL2Q9BWV7 592 aa16.84■□□□□ 0.29
HERPUD1-215ENST00000568676 TPSD1Q9BZJ3 242 aa16.84■□□□□ 0.29
HERPUD1-215ENST00000568676 IKZF4Q9H2S9 585 aa16.84■□□□□ 0.29
HERPUD1-215ENST00000568676 LINC00597Q9H2U6 94 aa16.84■□□□□ 0.29
HERPUD1-215ENST00000568676 LEFTY2O00292 366 aa16.83■□□□□ 0.28
HERPUD1-215ENST00000568676 TNNC2P02585 160 aa16.83■□□□□ 0.28
HERPUD1-215ENST00000568676 FAM163BP0C2L3 166 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms