RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 SOWAHAQ2M3V2 549 aa16.13■□□□□ 0.17
COMMD4-223ENST00000568301 SCARA3Q6AZY7 606 aa16.13■□□□□ 0.17
COMMD4-223ENST00000568301 TCEAL6Q6IPX3 200 aa16.13■□□□□ 0.17
COMMD4-223ENST00000568301 FAM171BQ6P995 826 aa16.13■□□□□ 0.17
COMMD4-223ENST00000568301 SPATA2LQ8IUW3 424 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-223ENST00000568301 ADGRF2Q8IZF7 708 aa16.13■□□□□ 0.17
COMMD4-223ENST00000568301 GPD1LQ8N335 351 aa16.13■□□□□ 0.17
COMMD4-223ENST00000568301 CPA6Q8N4T0 437 aa16.13■□□□□ 0.17
COMMD4-223ENST00000568301 FSIP1Q8NA03 581 aa16.13■□□□□ 0.17
COMMD4-223ENST00000568301 OSCP1Q8WVF1 389 aa16.13■□□□□ 0.17
COMMD4-223ENST00000568301 TCEAL3Q969E4 200 aa16.13■□□□□ 0.17
COMMD4-223ENST00000568301 ZC3H10Q96K80 434 aaKnown RBP16.13■□□□□ 0.17
COMMD4-223ENST00000568301 CEP295NLQ96MC4 621 aa16.13■□□□□ 0.17
COMMD4-223ENST00000568301 CBWD1Q9BRT8 395 aa16.13■□□□□ 0.17
COMMD4-223ENST00000568301 ECT2Q9H8V3 914 aa16.13■□□□□ 0.17
COMMD4-223ENST00000568301 DUS2Q9NX74 493 aaKnown RBP16.13■□□□□ 0.17
COMMD4-223ENST00000568301 SIX4Q9UIU6 781 aa16.13■□□□□ 0.17
COMMD4-223ENST00000568301 TRAV19A0A0A6YYK7 116 aa16.12■□□□□ 0.17
COMMD4-223ENST00000568301 RNF40O75150 1001 aa16.12■□□□□ 0.17
COMMD4-223ENST00000568301 TMEM191BP0C7N4 346 aa16.12■□□□□ 0.17
COMMD4-223ENST00000568301 SYT1P21579 422 aa16.12■□□□□ 0.17
COMMD4-223ENST00000568301 CEBPZQ03701 1054 aaKnown RBP16.12■□□□□ 0.17
COMMD4-223ENST00000568301 RESTQ13127 1097 aa16.12■□□□□ 0.17
COMMD4-223ENST00000568301 SLC39A14Q15043 492 aa16.12■□□□□ 0.17
COMMD4-223ENST00000568301 SURF1Q15526 300 aa16.12■□□□□ 0.17
COMMD4-223ENST00000568301 PLK5Q496M5 336 aa16.12■□□□□ 0.17
COMMD4-223ENST00000568301 NAIF1Q69YI7 327 aaPredicted RBP16.12■□□□□ 0.17
COMMD4-223ENST00000568301 FAM173BQ6P4H8 233 aa16.12■□□□□ 0.17
COMMD4-223ENST00000568301 C4orf50Q6ZRC1 276 aa16.12■□□□□ 0.17
COMMD4-223ENST00000568301 STXBP4Q6ZWJ1 553 aa16.12■□□□□ 0.17
COMMD4-223ENST00000568301 LIMS2Q7Z4I7 341 aa16.12■□□□□ 0.17
COMMD4-223ENST00000568301 OSTM1Q86WC4 334 aa16.12■□□□□ 0.17
COMMD4-223ENST00000568301 CCDC65Q8IXS2 484 aa16.12■□□□□ 0.17
COMMD4-223ENST00000568301 STKLD1Q8NE28 680 aa16.12■□□□□ 0.17
COMMD4-223ENST00000568301 ATP2A3Q93084 1043 aa16.12■□□□□ 0.17
COMMD4-223ENST00000568301 HHIPQ96QV1 700 aa16.12■□□□□ 0.17
COMMD4-223ENST00000568301 CYP2S1Q96SQ9 504 aa16.12■□□□□ 0.17
COMMD4-223ENST00000568301 PANK2Q9BZ23 570 aa16.12■□□□□ 0.17
COMMD4-223ENST00000568301 MTMR12Q9C0I1 747 aa16.12■□□□□ 0.17
COMMD4-223ENST00000568301 PCIF1Q9H4Z3 704 aa16.12■□□□□ 0.17
COMMD4-223ENST00000568301 INTS13Q9NVM9 706 aa16.12■□□□□ 0.17
COMMD4-223ENST00000568301 R3HCC1Q9Y3T6 440 aaKnown RBP16.12■□□□□ 0.17
COMMD4-223ENST00000568301 PCDHGA5Q9Y5G8 931 aa16.12■□□□□ 0.17
COMMD4-223ENST00000568301 ZNF233A6NK53 670 aa16.11■□□□□ 0.17
COMMD4-223ENST00000568301 PRPF6O94906 941 aaKnown RBP16.11■□□□□ 0.17
COMMD4-223ENST00000568301 CKMP06732 381 aa16.11■□□□□ 0.17
COMMD4-223ENST00000568301 TCF3P15923 654 aa16.11■□□□□ 0.17
COMMD4-223ENST00000568301 PFKLP17858 780 aa16.11■□□□□ 0.17
COMMD4-223ENST00000568301 NR1H3Q13133 447 aa16.11■□□□□ 0.17
COMMD4-223ENST00000568301 MAPRE1Q15691 268 aaKnown RBP16.11■□□□□ 0.17
COMMD4-223ENST00000568301 ZNF77Q15935 545 aa16.11■□□□□ 0.17
COMMD4-223ENST00000568301 DUOXA2Q1HG44 320 aa16.11■□□□□ 0.17
COMMD4-223ENST00000568301 RNF43Q68DV7 783 aa16.11■□□□□ 0.17
COMMD4-223ENST00000568301 PSAPL1Q6NUJ1 521 aa16.11■□□□□ 0.17
COMMD4-223ENST00000568301 VSTM1Q6UX27 236 aa16.11■□□□□ 0.17
COMMD4-223ENST00000568301 SYT13Q7L8C5 426 aa16.11■□□□□ 0.17
COMMD4-223ENST00000568301 SCN4BQ8IWT1 228 aa16.11■□□□□ 0.17
COMMD4-223ENST00000568301 HPDLQ96IR7 371 aa16.11■□□□□ 0.17
COMMD4-223ENST00000568301 ANKRD36BP1Q96IX9 119 aa16.11■□□□□ 0.17
COMMD4-223ENST00000568301 SPATA17Q96L03 361 aa16.11■□□□□ 0.17
COMMD4-223ENST00000568301 SLC22A12Q96S37 553 aa16.11■□□□□ 0.17
COMMD4-223ENST00000568301 FGFBP2Q9BYJ0 223 aa16.11■□□□□ 0.17
COMMD4-223ENST00000568301 DUSP15Q9H1R2 295 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-223ENST00000568301 TRPC7Q9HCX4 862 aa16.11■□□□□ 0.17
COMMD4-223ENST00000568301 VPS45Q9NRW7 570 aa16.11■□□□□ 0.17
COMMD4-223ENST00000568301 GCNT4Q9P109 453 aa16.11■□□□□ 0.17
COMMD4-223ENST00000568301 CDH9Q9ULB4 789 aa16.11■□□□□ 0.17
COMMD4-223ENST00000568301 AKAP13Q12802 2813 aa16.1■□□□□ 0.17
COMMD4-223ENST00000568301 MYO16Q9Y6X6 1858 aa16.1■□□□□ 0.17
COMMD4-223ENST00000568301 A0A087X0B3 334 aa16.1■□□□□ 0.17
COMMD4-223ENST00000568301 DCLK1O15075 740 aa16.1■□□□□ 0.17
COMMD4-223ENST00000568301 TNNC2P02585 160 aa16.1■□□□□ 0.17
COMMD4-223ENST00000568301 HDCP19113 662 aa16.1■□□□□ 0.17
COMMD4-223ENST00000568301 IFNAR2P48551 515 aa16.1■□□□□ 0.17
COMMD4-223ENST00000568301 PDE6CP51160 858 aa16.1■□□□□ 0.17
COMMD4-223ENST00000568301 EML3Q32P44 896 aa16.1■□□□□ 0.17
COMMD4-223ENST00000568301 CCDC26Q8TAB7 109 aa16.1■□□□□ 0.17
COMMD4-223ENST00000568301 NOC3LQ8WTT2 800 aaKnown RBP16.1■□□□□ 0.17
COMMD4-223ENST00000568301 CD101Q93033 1021 aa16.1■□□□□ 0.17
COMMD4-223ENST00000568301 FAM84AQ96KN4 292 aa16.1■□□□□ 0.17
COMMD4-223ENST00000568301 LRRC27Q9C0I9 530 aa16.1■□□□□ 0.17
COMMD4-223ENST00000568301 KIAA1586Q9HCI6 787 aa16.1■□□□□ 0.17
COMMD4-223ENST00000568301 MAGEC2Q9UBF1 373 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-223ENST00000568301 EBF1Q9UH73 591 aa16.1■□□□□ 0.17
COMMD4-223ENST00000568301 ARHGAP26Q9UNA1 814 aa16.1■□□□□ 0.17
COMMD4-223ENST00000568301 PTPRDP23468 1912 aa16.09■□□□□ 0.17
COMMD4-223ENST00000568301 HELZP42694 1942 aaKnown RBP16.09■□□□□ 0.17
COMMD4-223ENST00000568301 GIPC1O14908 333 aa16.09■□□□□ 0.17
COMMD4-223ENST00000568301 HCRTO43612 131 aa16.09■□□□□ 0.17
COMMD4-223ENST00000568301 ATP2C2O75185 946 aa16.09■□□□□ 0.17
COMMD4-223ENST00000568301 PROS1P07225 676 aa16.09■□□□□ 0.17
COMMD4-223ENST00000568301 LMO2P25791 158 aa16.09■□□□□ 0.17
COMMD4-223ENST00000568301 USP4Q13107 963 aa16.09■□□□□ 0.17
COMMD4-223ENST00000568301 KCNB1Q14721 858 aa16.09■□□□□ 0.17
COMMD4-223ENST00000568301 CCDC142Q17RM4 750 aa16.09■□□□□ 0.17
COMMD4-223ENST00000568301 KIAA1958Q8N8K9 716 aa16.09■□□□□ 0.17
COMMD4-223ENST00000568301 ARL14EPQ8N8R7 260 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-223ENST00000568301 OR5B17Q8NGF7 314 aa16.09■□□□□ 0.17
COMMD4-223ENST00000568301 RPLP0P6Q8NHW5 317 aa16.09■□□□□ 0.17
COMMD4-223ENST00000568301 SH3RF2Q8TEC5 729 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms