RNA–Protein interactions for RNA: ENST00000567988.5

FANCA-229, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-229ENST00000567988 ARNTLO00327 626 aa13.08□□□□□ -0.32
FANCA-229ENST00000567988 GNA14O95837 355 aa13.08□□□□□ -0.32
FANCA-229ENST00000567988 PDGFBP01127 241 aaPredicted RBP13.08□□□□□ -0.32
FANCA-229ENST00000567988 CSH1P0DML2 217 aa13.08□□□□□ -0.32
FANCA-229ENST00000567988 CSH2P0DML3 217 aa13.08□□□□□ -0.32
FANCA-229ENST00000567988 MYL4P12829 197 aa13.08□□□□□ -0.32
FANCA-229ENST00000567988 P4HA1P13674 534 aa13.08□□□□□ -0.32
FANCA-229ENST00000567988 GABRR2P28476 465 aa13.08□□□□□ -0.32
FANCA-229ENST00000567988 DCAF17Q5H9S7 520 aaPredicted RBP13.08□□□□□ -0.32
FANCA-229ENST00000567988 IER5LQ5T953 404 aa13.08□□□□□ -0.32
FANCA-229ENST00000567988 FAM35AQ86V20 835 aa13.08□□□□□ -0.32
FANCA-229ENST00000567988 ST13P5Q8NFI4 369 aaPredicted RBP13.08□□□□□ -0.32
FANCA-229ENST00000567988 SRRTQ9BXP5 876 aaKnown RBP13.08□□□□□ -0.32
FANCA-229ENST00000567988 GPR88Q9GZN0 384 aa13.08□□□□□ -0.32
FANCA-229ENST00000567988 ELOVL4Q9GZR5 314 aa13.08□□□□□ -0.32
FANCA-229ENST00000567988 MAGEC2Q9UBF1 373 aaPredicted RBP13.08□□□□□ -0.32
FANCA-229ENST00000567988 DENND4CQ5VZ89 1909 aa13.07□□□□□ -0.32
FANCA-229ENST00000567988 KRBA1A5PL33 1030 aa13.07□□□□□ -0.32
FANCA-229ENST00000567988 F8VP50 259 aa13.07□□□□□ -0.32
FANCA-229ENST00000567988 CLDN5O00501 218 aa13.07□□□□□ -0.32
FANCA-229ENST00000567988 PRAMEF12O95522 483 aa13.07□□□□□ -0.32
FANCA-229ENST00000567988 NPR3P17342 541 aa13.07□□□□□ -0.32
FANCA-229ENST00000567988 ACO1P21399 889 aaKnown RBP13.07□□□□□ -0.32
FANCA-229ENST00000567988 ERCC5P28715 1186 aaPredicted RBP13.07□□□□□ -0.32
FANCA-229ENST00000567988 CDC25CP30307 473 aa13.07□□□□□ -0.32
FANCA-229ENST00000567988 FCHO2Q0JRZ9 810 aa13.07□□□□□ -0.32
FANCA-229ENST00000567988 ORC1Q13415 861 aa13.07□□□□□ -0.32
FANCA-229ENST00000567988 VEPH1Q14D04 833 aa13.07□□□□□ -0.32
FANCA-229ENST00000567988 CT47A1Q5JQC4 288 aaPredicted RBP13.07□□□□□ -0.32
FANCA-229ENST00000567988 DPY19L2P1Q6NXN4 242 aa13.07□□□□□ -0.32
FANCA-229ENST00000567988 VITQ6UXI7 678 aa13.07□□□□□ -0.32
FANCA-229ENST00000567988 ACOT1Q86TX2 421 aa13.07□□□□□ -0.32
FANCA-229ENST00000567988 C12orf29Q8N999 325 aa13.07□□□□□ -0.32
FANCA-229ENST00000567988 ZSCAN18Q8TBC5 510 aaPredicted RBP13.07□□□□□ -0.32
FANCA-229ENST00000567988 TNIP3Q96KP6 325 aa13.07□□□□□ -0.32
FANCA-229ENST00000567988 HNRNPABQ99729 332 aaKnown RBP13.07□□□□□ -0.32
FANCA-229ENST00000567988 KXD1Q9BQD3 176 aa13.07□□□□□ -0.32
FANCA-229ENST00000567988 DDX23Q9BUQ8 820 aaKnown RBP13.07□□□□□ -0.32
FANCA-229ENST00000567988 SLC46A2Q9BY10 475 aa13.07□□□□□ -0.32
FANCA-229ENST00000567988 IMPG2Q9BZV3 1241 aa13.07□□□□□ -0.32
FANCA-229ENST00000567988 MMRN2Q9H8L6 949 aa13.07□□□□□ -0.32
FANCA-229ENST00000567988 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.07□□□□□ -0.321e-7■■■■■ 115.4
FANCA-229ENST00000567988 WNT16Q9UBV4 365 aa13.07□□□□□ -0.32
FANCA-229ENST00000567988 NUP210Q8TEM1 1887 aaPredicted RBP13.07□□□□□ -0.32
FANCA-229ENST00000567988 PATJQ8NI35 1801 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 KMT2EQ8IZD2 1858 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 COL4A3Q01955 1670 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 HHLA1C9JL84 531 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 TRIM66O15016 1216 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 BEST1O76090 585 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 OLFM2O95897 454 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 RAD23BP54727 409 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 GPC5P78333 572 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 CYP4F8P98187 520 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 CYP27A1Q02318 531 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 KCNH2Q12809 1159 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 CUL2Q13617 745 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 TCERG1LQ5VWI1 586 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 CWF19L1Q69YN2 538 aaKnown RBP13.06□□□□□ -0.32
FANCA-229ENST00000567988 SLC4A11Q8NBS3 891 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 RIN3Q8TB24 985 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 CNOT6LQ96LI5 555 aaKnown RBP13.06□□□□□ -0.32
FANCA-229ENST00000567988 SMOQ99835 787 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 NT5C1AQ9BXI3 368 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 ATXN3LQ9H3M9 355 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 TASP1Q9H6P5 420 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 TRPV5Q9NQA5 729 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 CISHQ9NSE2 258 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 OBP2AQ9NY56 170 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 GCNT4Q9P109 453 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 ZMYM5Q9UJ78 669 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 CACNA1HO95180 2353 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 VPS13AQ96RL7 3174 aa13.06□□□□□ -0.32
FANCA-229ENST00000567988 MBD3O95983 291 aa13.05□□□□□ -0.32
FANCA-229ENST00000567988 ZDHHC11BP0C7U3 371 aa13.05□□□□□ -0.32
FANCA-229ENST00000567988 CCDC130P13994 396 aa13.05□□□□□ -0.32
FANCA-229ENST00000567988 DDX6P26196 483 aaKnown RBP eCLIP13.05□□□□□ -0.32
FANCA-229ENST00000567988 VIPR2P41587 438 aa13.05□□□□□ -0.32
FANCA-229ENST00000567988 ZNF132P52740 706 aa13.05□□□□□ -0.32
FANCA-229ENST00000567988 CCDC40Q4G0X9 1142 aa13.05□□□□□ -0.32
FANCA-229ENST00000567988 SNX30Q5VWJ9 437 aa13.05□□□□□ -0.32
FANCA-229ENST00000567988 CLEC20AQ6ZU45 233 aa13.05□□□□□ -0.32
FANCA-229ENST00000567988 DENND5BQ6ZUT9 1274 aa13.05□□□□□ -0.32
FANCA-229ENST00000567988 MON1AQ86VX9 555 aa13.05□□□□□ -0.32
FANCA-229ENST00000567988 ARID3BQ8IVW6 561 aaPredicted RBP13.05□□□□□ -0.32
FANCA-229ENST00000567988 MFSD6LQ8IWD5 586 aa13.05□□□□□ -0.32
FANCA-229ENST00000567988 SCN4BQ8IWT1 228 aa13.05□□□□□ -0.32
FANCA-229ENST00000567988 ZNF687Q8N1G0 1237 aa13.05□□□□□ -0.32
FANCA-229ENST00000567988 FBXL6Q8N531 539 aa13.05□□□□□ -0.32
FANCA-229ENST00000567988 TTC39CQ8N584 583 aa13.05□□□□□ -0.32
FANCA-229ENST00000567988 SLC2A14Q8TDB8 520 aa13.05□□□□□ -0.32
FANCA-229ENST00000567988 KCNK16Q96T55 309 aa13.05□□□□□ -0.32
FANCA-229ENST00000567988 THAP9Q9H5L6 903 aa13.05□□□□□ -0.32
FANCA-229ENST00000567988 UXTQ9UBK9 157 aaPredicted RBP13.05□□□□□ -0.32
FANCA-229ENST00000567988 CNTN6Q9UQ52 1028 aa13.05□□□□□ -0.32
FANCA-229ENST00000567988 AFPP02771 609 aaKnown RBP13.04□□□□□ -0.32
FANCA-229ENST00000567988 TCF3P15923 654 aa13.04□□□□□ -0.32
FANCA-229ENST00000567988 CD58P19256 250 aa13.04□□□□□ -0.32
FANCA-229ENST00000567988 GRIK1P39086 918 aa13.04□□□□□ -0.32
FANCA-229ENST00000567988 GCNT1Q02742 428 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms