RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 SIX2Q9NPC8 291 aa18.3■□□□□ 0.52
COMMD4-220ENST00000567720 NR2E1Q9Y466 385 aa18.3■□□□□ 0.52
COMMD4-220ENST00000567720 ASB3Q9Y575 518 aa18.3■□□□□ 0.52
COMMD4-220ENST00000567720 ATP8B3O60423 1300 aa18.29■□□□□ 0.52
COMMD4-220ENST00000567720 F8VP50 259 aa18.29■□□□□ 0.52
COMMD4-220ENST00000567720 MOSPD3O75425 235 aa18.29■□□□□ 0.52
COMMD4-220ENST00000567720 ATP1A3P13637 1013 aa18.29■□□□□ 0.52
COMMD4-220ENST00000567720 HMGA1P17096 107 aaKnown RBP18.29■□□□□ 0.52
COMMD4-220ENST00000567720 PON1P27169 355 aa18.29■□□□□ 0.52
COMMD4-220ENST00000567720 SSTR3P32745 418 aaPredicted RBP18.29■□□□□ 0.52
COMMD4-220ENST00000567720 RPL10AP62906 217 aaKnown RBP18.29■□□□□ 0.52
COMMD4-220ENST00000567720 MTMR3Q13615 1198 aa18.29■□□□□ 0.52
COMMD4-220ENST00000567720 IQCB1Q15051 598 aa18.29■□□□□ 0.52
COMMD4-220ENST00000567720 POTEHQ6S545 545 aa18.29■□□□□ 0.52
COMMD4-220ENST00000567720 PDZD4Q76G19 769 aaPredicted RBP18.29■□□□□ 0.52
COMMD4-220ENST00000567720 OTOP3Q7RTS5 596 aa18.29■□□□□ 0.52
COMMD4-220ENST00000567720 APTXQ7Z2E3 356 aaKnown RBP18.29■□□□□ 0.52
COMMD4-220ENST00000567720 DNAJB7Q7Z6W7 309 aaPredicted RBP18.29■□□□□ 0.52
COMMD4-220ENST00000567720 ITIH5Q86UX2 942 aa18.29■□□□□ 0.52
COMMD4-220ENST00000567720 GJD3Q8N144 294 aa18.29■□□□□ 0.52
COMMD4-220ENST00000567720 SMARCD1Q96GM5 515 aa18.29■□□□□ 0.52
COMMD4-220ENST00000567720 IL21Q9HBE4 155 aa18.29■□□□□ 0.52
COMMD4-220ENST00000567720 APEX2Q9UBZ4 518 aa18.29■□□□□ 0.52
COMMD4-220ENST00000567720 LIMA1Q9UHB6 759 aaKnown RBP18.29■□□□□ 0.52
COMMD4-220ENST00000567720 AJAP1Q9UKB5 411 aaPredicted RBP18.29■□□□□ 0.52
COMMD4-220ENST00000567720 PES1O00541 588 aaKnown RBP18.28■□□□□ 0.52
COMMD4-220ENST00000567720 NOL4O94818 638 aa18.28■□□□□ 0.52
COMMD4-220ENST00000567720 MYL4P12829 197 aa18.28■□□□□ 0.52
COMMD4-220ENST00000567720 GJA1P17302 382 aa18.28■□□□□ 0.52
COMMD4-220ENST00000567720 ADORA2BP29275 332 aa18.28■□□□□ 0.52
COMMD4-220ENST00000567720 GBP2P32456 591 aaPredicted RBP18.28■□□□□ 0.52
COMMD4-220ENST00000567720 COPB1P53618 953 aaKnown RBP18.28■□□□□ 0.52
COMMD4-220ENST00000567720 YWHAEP62258 255 aaKnown RBP18.28■□□□□ 0.52
COMMD4-220ENST00000567720 DPY19L2P1Q6NXN4 242 aa18.28■□□□□ 0.52
COMMD4-220ENST00000567720 GAREM2Q75VX8 874 aa18.28■□□□□ 0.52
COMMD4-220ENST00000567720 LEMD2Q8NC56 503 aa18.28■□□□□ 0.52
COMMD4-220ENST00000567720 SHKBP1Q8TBC3 707 aa18.28■□□□□ 0.52
COMMD4-220ENST00000567720 FGF13Q92913 245 aa18.28■□□□□ 0.52
COMMD4-220ENST00000567720 TMEM176AQ96HP8 235 aa18.28■□□□□ 0.52
COMMD4-220ENST00000567720 MED10Q9BTT4 135 aa18.28■□□□□ 0.52
COMMD4-220ENST00000567720 VPS16Q9H269 839 aa18.28■□□□□ 0.52
COMMD4-220ENST00000567720 MRPS23Q9Y3D9 190 aaKnown RBP18.28■□□□□ 0.52
COMMD4-220ENST00000567720 COL4A2P08572 1712 aa18.28■□□□□ 0.52
COMMD4-220ENST00000567720 SLC38A8A6NNN8 435 aa18.27■□□□□ 0.52
COMMD4-220ENST00000567720 TRIM66O15016 1216 aa18.27■□□□□ 0.52
COMMD4-220ENST00000567720 TADA3O75528 432 aa18.27■□□□□ 0.52
COMMD4-220ENST00000567720 AP1G2O75843 785 aa18.27■□□□□ 0.52
COMMD4-220ENST00000567720 GRIK1P39086 918 aa18.27■□□□□ 0.52
COMMD4-220ENST00000567720 ZNF132P52740 706 aa18.27■□□□□ 0.52
COMMD4-220ENST00000567720 KCNMA1Q12791 1236 aa18.27■□□□□ 0.52
COMMD4-220ENST00000567720 PPP1R26Q5T8A7 1209 aaPredicted RBP18.27■□□□□ 0.52
COMMD4-220ENST00000567720 TMEM270Q6UE05 265 aa18.27■□□□□ 0.52
COMMD4-220ENST00000567720 ZDHHC14Q8IZN3 488 aa18.27■□□□□ 0.52
COMMD4-220ENST00000567720 ZMIZ2Q8NF64 920 aa18.27■□□□□ 0.52
COMMD4-220ENST00000567720 ACSF2Q96CM8 615 aaPredicted RBP18.27■□□□□ 0.52
COMMD4-220ENST00000567720 SPATA17Q96L03 361 aa18.27■□□□□ 0.52
COMMD4-220ENST00000567720 C8orf48Q96LL4 319 aa18.27■□□□□ 0.52
COMMD4-220ENST00000567720 CBX8Q9HC52 389 aa18.27■□□□□ 0.52
COMMD4-220ENST00000567720 DMAP1Q9NPF5 467 aaPredicted RBP18.27■□□□□ 0.52
COMMD4-220ENST00000567720 EPS15L1Q9UBC2 864 aa18.27■□□□□ 0.52
COMMD4-220ENST00000567720 CDH7Q9ULB5 785 aa18.27■□□□□ 0.52
COMMD4-220ENST00000567720 A0A1W2PRU2 124 aa18.26■□□□□ 0.51
COMMD4-220ENST00000567720 LGALS16A8MUM7 142 aa18.26■□□□□ 0.51
COMMD4-220ENST00000567720 BEST1O76090 585 aa18.26■□□□□ 0.51
COMMD4-220ENST00000567720 CSH1P0DML2 217 aa18.26■□□□□ 0.51
COMMD4-220ENST00000567720 CSH2P0DML3 217 aa18.26■□□□□ 0.51
COMMD4-220ENST00000567720 TRIM21P19474 475 aaKnown RBP18.26■□□□□ 0.51
COMMD4-220ENST00000567720 ANXA13P27216 316 aa18.26■□□□□ 0.51
COMMD4-220ENST00000567720 GABRR2P28476 465 aa18.26■□□□□ 0.51
COMMD4-220ENST00000567720 USP46P62068 366 aa18.26■□□□□ 0.51
COMMD4-220ENST00000567720 TEAD2Q15562 447 aa18.26■□□□□ 0.51
COMMD4-220ENST00000567720 STXBP5Q5T5C0 1151 aa18.26■□□□□ 0.51
COMMD4-220ENST00000567720 CYP4A22Q5TCH4 519 aa18.26■□□□□ 0.51
COMMD4-220ENST00000567720 CLEC20AQ6ZU45 233 aa18.26■□□□□ 0.51
COMMD4-220ENST00000567720 TMEM150AQ86TG1 271 aa18.26■□□□□ 0.51
COMMD4-220ENST00000567720 RBBP8NLQ8NC74 664 aaPredicted RBP18.26■□□□□ 0.51
COMMD4-220ENST00000567720 KHSRPQ92945 711 aaKnown RBP eCLIP18.26■□□□□ 0.51
COMMD4-220ENST00000567720 CYFIP2Q96F07 1278 aa18.26■□□□□ 0.51
COMMD4-220ENST00000567720 TRMT2BQ96GJ1 504 aaKnown RBP18.26■□□□□ 0.51
COMMD4-220ENST00000567720 KCNK16Q96T55 309 aa18.26■□□□□ 0.51
COMMD4-220ENST00000567720 HNRNPABQ99729 332 aaKnown RBP18.26■□□□□ 0.51
COMMD4-220ENST00000567720 SMOQ99835 787 aa18.26■□□□□ 0.51
COMMD4-220ENST00000567720 UBE2TQ9NPD8 197 aaPredicted RBP18.26■□□□□ 0.51
COMMD4-220ENST00000567720 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.26■□□□□ 0.512e-7■■□□□ 14.4
COMMD4-220ENST00000567720 MAGED2Q9UNF1 606 aaPredicted RBP18.26■□□□□ 0.51
COMMD4-220ENST00000567720 PCDHB4Q9Y5E5 795 aa18.26■□□□□ 0.51
COMMD4-220ENST00000567720 RNF225M0QZC1 329 aaPredicted RBP18.25■□□□□ 0.51
COMMD4-220ENST00000567720 ZNF197O14709 1029 aa18.25■□□□□ 0.51
COMMD4-220ENST00000567720 FAM200BP0CF97 657 aa18.25■□□□□ 0.51
COMMD4-220ENST00000567720 LAMP2P13473 410 aa18.25■□□□□ 0.51
COMMD4-220ENST00000567720 CYP4F8P98187 520 aa18.25■□□□□ 0.51
COMMD4-220ENST00000567720 ARHGAP17Q68EM7 881 aa18.25■□□□□ 0.51
COMMD4-220ENST00000567720 LUZP1Q86V48 1076 aa18.25■□□□□ 0.51
COMMD4-220ENST00000567720 RNF135Q8IUD6 432 aa18.25■□□□□ 0.51
COMMD4-220ENST00000567720 MYRFLQ96LU7 910 aa18.25■□□□□ 0.51
COMMD4-220ENST00000567720 CEP295NLQ96MC4 621 aa18.25■□□□□ 0.51
COMMD4-220ENST00000567720 HEXIM2Q96MH2 286 aaKnown RBP18.25■□□□□ 0.51
COMMD4-220ENST00000567720 LSM14BQ9BX40 385 aaKnown RBP18.25■□□□□ 0.51
COMMD4-220ENST00000567720 CSNK1G1Q9HCP0 422 aa18.25■□□□□ 0.51
COMMD4-220ENST00000567720 CNTN6Q9UQ52 1028 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms