RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 BATF3Q9NR55 127 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 SNCAIPQ9Y6H5 919 aa14.93□□□□□ -0.02
CDH1-209ENST00000566510 C3orf70A6NLC5 250 aaPredicted RBP14.92□□□□□ -0.02
CDH1-209ENST00000566510 LPXNO60711 386 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 CALB2P22676 271 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 KDELR1P24390 212 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 POLR2BP30876 1174 aaKnown RBP14.92□□□□□ -0.02
CDH1-209ENST00000566510 EIF3EP60228 445 aaKnown RBP14.92□□□□□ -0.02
CDH1-209ENST00000566510 TAF5Q15542 800 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 CCDC142Q17RM4 750 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 PTPN20Q4JDL3 420 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 ADGRD1Q6QNK2 874 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 ZC3H18Q86VM9 953 aaKnown RBP14.92□□□□□ -0.02
CDH1-209ENST00000566510 LRRC6Q86X45 466 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 NAT8LQ8N9F0 302 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 TTC17Q96AE7 1141 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 SPDL1Q96EA4 605 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 ZNF518BQ9C0D4 1074 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 METTL5Q9NRN9 209 aaKnown RBP14.92□□□□□ -0.02
CDH1-209ENST00000566510 STRIP2Q9ULQ0 834 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 POLIQ9UNA4 740 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 PEX10O60683 326 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 PEX11AO75192 247 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 WFS1O76024 890 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 TMEM63AO94886 807 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 SESN3P58005 492 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 SLC45A4Q5BKX6 768 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 EEPD1Q7L9B9 569 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 CLNKQ7Z7G1 428 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 KIAA0319LQ8IZA0 1049 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 ARFGAP1Q8N6T3 406 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 REPS2Q8NFH8 660 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 STK32AQ8WU08 396 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 JDP2Q8WYK2 163 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 ACSS3Q9H6R3 686 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 HEY2Q9UBP5 337 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 NUMBLQ9Y6R0 609 aa14.92□□□□□ -0.02
CDH1-209ENST00000566510 C2CD2LO14523 706 aa14.91□□□□□ -0.02
CDH1-209ENST00000566510 TOM1L1O75674 476 aa14.91□□□□□ -0.02
CDH1-209ENST00000566510 PTPN7P35236 360 aa14.91□□□□□ -0.02
CDH1-209ENST00000566510 CDH8P55286 799 aa14.91□□□□□ -0.02
CDH1-209ENST00000566510 YWHAGP61981 247 aaKnown RBP eCLIP14.91□□□□□ -0.02
CDH1-209ENST00000566510 SLC25A11Q02978 314 aaKnown RBP14.91□□□□□ -0.02
CDH1-209ENST00000566510 UBR7Q8N806 425 aa14.91□□□□□ -0.02
CDH1-209ENST00000566510 TTC13Q8NBP0 860 aa14.91□□□□□ -0.02
CDH1-209ENST00000566510 SPATA18Q8TC71 538 aa14.91□□□□□ -0.02
CDH1-209ENST00000566510 PTPRN2Q92932 1015 aa14.91□□□□□ -0.02
CDH1-209ENST00000566510 NAF1Q96HR8 494 aaKnown RBP14.91□□□□□ -0.02
CDH1-209ENST00000566510 WDR83Q9BRX9 315 aaKnown RBP14.91□□□□□ -0.02
CDH1-209ENST00000566510 MRPL4Q9BYD3 311 aaKnown RBP14.91□□□□□ -0.02
CDH1-209ENST00000566510 TRIM55Q9BYV6 548 aa14.91□□□□□ -0.02
CDH1-209ENST00000566510 NRBP2Q9NSY0 501 aa14.91□□□□□ -0.02
CDH1-209ENST00000566510 CYTH4Q9UIA0 394 aa14.91□□□□□ -0.02
CDH1-209ENST00000566510 PIK3R2O00459 728 aa14.91□□□□□ -0.02
CDH1-209ENST00000566510 RBP3P10745 1247 aa14.91□□□□□ -0.02
CDH1-209ENST00000566510 PTPN4P29074 926 aa14.91□□□□□ -0.02
CDH1-209ENST00000566510 DARS2Q6PI48 645 aaKnown RBP14.91□□□□□ -0.02
CDH1-209ENST00000566510 POLNQ7Z5Q5 900 aa14.91□□□□□ -0.02
CDH1-209ENST00000566510 LRRC71Q8N4P6 559 aa14.91□□□□□ -0.02
CDH1-209ENST00000566510 NIPA2Q8N8Q9 360 aa14.91□□□□□ -0.02
CDH1-209ENST00000566510 RNF149Q8NC42 400 aa14.91□□□□□ -0.02
CDH1-209ENST00000566510 FAM111AQ96PZ2 611 aa14.91□□□□□ -0.02
CDH1-209ENST00000566510 TSSK1BQ9BXA7 367 aa14.91□□□□□ -0.02
CDH1-209ENST00000566510 DENND2DQ9H6A0 471 aaPredicted RBP14.91□□□□□ -0.02
CDH1-209ENST00000566510 TMEM134Q9H6X4 195 aa14.91□□□□□ -0.02
CDH1-209ENST00000566510 AS3MTQ9HBK9 375 aa14.91□□□□□ -0.02
CDH1-209ENST00000566510 HACL1Q9UJ83 578 aa14.91□□□□□ -0.02
CDH1-209ENST00000566510 SIGLEC16A6NMB1 481 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 MCF2LO15068 1137 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 PCK1P35558 622 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 ELK3P41970 407 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 STAT5BP51692 787 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 AP3M2P53677 418 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 YWHAEP62258 255 aaKnown RBP14.9□□□□□ -0.02
CDH1-209ENST00000566510 PTK7Q13308 1070 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 IGDCC3Q8IVU1 814 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 TMEM130Q8N3G9 435 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 DCAKDQ8WVC6 231 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 CPXM1Q96SM3 734 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 CYLDQ9NQC7 956 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 C2orf71A6NGG8 1288 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 AVILO75366 819 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 RNF8O76064 485 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 INHBAP08476 426 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 TPBGLP0DKB5 382 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 PTPRAP18433 802 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 NPNTQ6UXI9 565 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 BBS12Q6ZW61 710 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 SCYL3Q8IZE3 742 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 BANPQ8N9N5 519 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 CYTH2Q99418 400 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 SLC24A3Q9HC58 644 aa14.9□□□□□ -0.02
CDH1-209ENST00000566510 FBXO6Q9NRD1 293 aaPredicted RBP14.9□□□□□ -0.02
CDH1-209ENST00000566510 OGTO15294 1046 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 TM9SF1O15321 606 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 MSCO60682 206 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 HAUS5O94927 633 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 TNNC2P02585 160 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 PYGBP11216 843 aa14.89□□□□□ -0.03
CDH1-209ENST00000566510 ASPAP45381 313 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms