RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 CPA6Q8N4T0 437 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 RDH13Q8NBN7 331 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 GLIS3Q8NEA6 775 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 OR5B17Q8NGF7 314 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 ZNF507Q8TCN5 953 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 FNBP1Q96RU3 617 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 PKMYT1Q99640 499 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 SYT15Q9BQS2 421 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 TRIM9Q9C026 710 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 HPS4Q9NQG7 708 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 SLC8A2Q9UPR5 921 aa12.78□□□□□ -0.36
UBR1-206ENST00000566493 MED19A0JLT2 244 aaPredicted RBP12.77□□□□□ -0.37
UBR1-206ENST00000566493 TRDMT1O14717 391 aaKnown RBP12.77□□□□□ -0.37
UBR1-206ENST00000566493 LRP3O75074 770 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 ATP2C2O75185 946 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 HSP90AA1P07900 732 aaKnown RBP12.77□□□□□ -0.37
UBR1-206ENST00000566493 DLATP10515 647 aaKnown RBP12.77□□□□□ -0.37
UBR1-206ENST00000566493 PDIA4P13667 645 aaKnown RBP12.77□□□□□ -0.37
UBR1-206ENST00000566493 TNNI1P19237 187 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 DRD1P21728 446 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 ANXA13P27216 316 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 HOXA6P31267 233 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 GRIK1P39086 918 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 MAGEA11P43364 429 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 IFNAR2P48551 515 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 PDE6CP51160 858 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 PSMC1P62191 440 aaKnown RBP12.77□□□□□ -0.37
UBR1-206ENST00000566493 SNRPFP62306 86 aaKnown RBP12.77□□□□□ -0.37
UBR1-206ENST00000566493 CYP27A1Q02318 531 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 FAM160A1Q05DH4 1040 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 MTF1Q14872 753 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 SNRNP35Q16560 246 aaKnown RBP12.77□□□□□ -0.37
UBR1-206ENST00000566493 TMEM196Q5HYL7 178 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 FOXD4L5Q5VV16 416 aaPredicted RBP12.77□□□□□ -0.37
UBR1-206ENST00000566493 FAM171BQ6P995 826 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 VSTM1Q6UX27 236 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 HS2ST1Q7LGA3 356 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 TRAPPC11Q7Z392 1133 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 WDR5BQ86VZ2 330 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 FOXD4L4Q8WXT5 416 aaPredicted RBP12.77□□□□□ -0.37
UBR1-206ENST00000566493 C7orf25Q9BPX7 421 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 SNX25Q9H3E2 840 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 MAGEF1Q9HAY2 307 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 DUS2Q9NX74 493 aaKnown RBP12.77□□□□□ -0.37
UBR1-206ENST00000566493 FAM13BQ9NYF5 915 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 EHD2Q9NZN4 543 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 UBE4BO95155 1302 aa12.77□□□□□ -0.37
UBR1-206ENST00000566493 CLIC2O15247 247 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 POLR2DO15514 142 aaKnown RBP12.76□□□□□ -0.37
UBR1-206ENST00000566493 HCRTO43612 131 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 TADA3O75528 432 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 PDGFRBP09619 1106 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 ARSAP15289 507 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 HDCP19113 662 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 TGM1P22735 817 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 WARSP23381 471 aaKnown RBP12.76□□□□□ -0.37
UBR1-206ENST00000566493 BDNFP23560 247 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 LMO2P25791 158 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 HOXD13P35453 343 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 CYP2J2P51589 502 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 ATXN1P54253 815 aaKnown RBP12.76□□□□□ -0.37
UBR1-206ENST00000566493 TNNC1P63316 161 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 NR1H3Q13133 447 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 SRSF5Q13243 272 aaKnown RBP12.76□□□□□ -0.37
UBR1-206ENST00000566493 KCNB1Q14721 858 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 FSTL4Q6MZW2 842 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 CNNM4Q6P4Q7 775 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 SHC4Q6S5L8 630 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 EPM2AIP1Q7L775 607 aaPredicted RBP12.76□□□□□ -0.37
UBR1-206ENST00000566493 XXYLT1Q8NBI6 393 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 OSCP1Q8WVF1 389 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 KBTBD7Q8WVZ9 684 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 ATP2A3Q93084 1043 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 MYLPFQ96A32 169 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 CCDC127Q96BQ5 260 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 SPATA17Q96L03 361 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 CEP295NLQ96MC4 621 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 CYP2S1Q96SQ9 504 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 P2RY13Q9BPV8 354 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 RTKNQ9BST9 563 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 PARD6AQ9NPB6 346 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 AGPAT3Q9NRZ7 376 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 C2orf42Q9NWW7 574 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 PTPRJQ12913 1337 aa12.76□□□□□ -0.37
UBR1-206ENST00000566493 OTOL1A6NHN0 477 aaPredicted RBP12.75□□□□□ -0.37
UBR1-206ENST00000566493 TRIM66O15016 1216 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 FOXD2O60548 495 aaPredicted RBP12.75□□□□□ -0.37
UBR1-206ENST00000566493 CLSTN1O94985 981 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 GJA4P35212 333 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 GNL1P36915 607 aaPredicted RBP12.75□□□□□ -0.37
UBR1-206ENST00000566493 ME1P48163 572 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 GALK1P51570 392 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 CYP24A1Q07973 514 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 TRPC3Q13507 836 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 PSMD6Q15008 389 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 ZNF77Q15935 545 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 CCDC142Q17RM4 750 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 FOXD4L6Q3SYB3 417 aaPredicted RBP12.75□□□□□ -0.37
UBR1-206ENST00000566493 FBXO43Q4G163 708 aa12.75□□□□□ -0.37
UBR1-206ENST00000566493 LCE2DQ5TA82 110 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms