RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 TMEM86AQ8N2M4 240 aa13.72□□□□□ -0.21
RNF40-208ENST00000565995 TSTD1Q8NFU3 115 aa13.72□□□□□ -0.21
RNF40-208ENST00000565995 CEP295NLQ96MC4 621 aa13.72□□□□□ -0.21
RNF40-208ENST00000565995 ZNF560Q96MR9 790 aa13.72□□□□□ -0.21
RNF40-208ENST00000565995 PI4K2AQ9BTU6 479 aa13.72□□□□□ -0.21
RNF40-208ENST00000565995 MAGED2Q9UNF1 606 aaPredicted RBP13.72□□□□□ -0.21
RNF40-208ENST00000565995 NEUROG3Q9Y4Z2 214 aa13.72□□□□□ -0.21
RNF40-208ENST00000565995 IGSF10Q6WRI0 2623 aa13.71□□□□□ -0.21
RNF40-208ENST00000565995 VWA3AA6NCI4 1184 aa13.71□□□□□ -0.21
RNF40-208ENST00000565995 PATE3B3GLJ2 98 aa13.71□□□□□ -0.21
RNF40-208ENST00000565995 GABRDO14764 452 aa13.71□□□□□ -0.21
RNF40-208ENST00000565995 FAM13AO94988 1023 aa13.71□□□□□ -0.21
RNF40-208ENST00000565995 IL18RAPO95256 599 aa13.71□□□□□ -0.21
RNF40-208ENST00000565995 TOP3BO95985 862 aaKnown RBP13.71□□□□□ -0.21
RNF40-208ENST00000565995 HOXB3P14651 431 aaPredicted RBP13.71□□□□□ -0.21
RNF40-208ENST00000565995 BCKDHBP21953 392 aa13.71□□□□□ -0.21
RNF40-208ENST00000565995 CYP2F1P24903 491 aa13.71□□□□□ -0.21
RNF40-208ENST00000565995 GBP1P32455 592 aa13.71□□□□□ -0.21
RNF40-208ENST00000565995 IFNAR2P48551 515 aa13.71□□□□□ -0.21
RNF40-208ENST00000565995 MRPS21P82921 87 aaKnown RBP13.71□□□□□ -0.21
RNF40-208ENST00000565995 LMAN2Q12907 356 aa13.71□□□□□ -0.21
RNF40-208ENST00000565995 CRY1Q16526 586 aa13.71□□□□□ -0.21
RNF40-208ENST00000565995 DDR2Q16832 855 aa13.71□□□□□ -0.21
RNF40-208ENST00000565995 INTS6LQ5JSJ4 861 aaKnown RBP13.71□□□□□ -0.21
RNF40-208ENST00000565995 PEAR1Q5VY43 1037 aaPredicted RBP13.71□□□□□ -0.21
RNF40-208ENST00000565995 CYP2U1Q7Z449 544 aa13.71□□□□□ -0.21
RNF40-208ENST00000565995 GPBP1Q86WP2 473 aa13.71□□□□□ -0.21
RNF40-208ENST00000565995 PDCL2Q8N4E4 241 aa13.71□□□□□ -0.21
RNF40-208ENST00000565995 FSIP1Q8NA03 581 aa13.71□□□□□ -0.21
RNF40-208ENST00000565995 CXorf38Q8TB03 319 aa13.71□□□□□ -0.21
RNF40-208ENST00000565995 FUBP3Q96I24 572 aaKnown RBP eCLIP13.71□□□□□ -0.21
RNF40-208ENST00000565995 STRA6Q9BX79 667 aa13.71□□□□□ -0.21
RNF40-208ENST00000565995 LINC00597Q9H2U6 94 aa13.71□□□□□ -0.21
RNF40-208ENST00000565995 GDAP2Q9NXN4 497 aa13.71□□□□□ -0.21
RNF40-208ENST00000565995 ARHGAP26Q9UNA1 814 aa13.71□□□□□ -0.21
RNF40-208ENST00000565995 WNT6Q9Y6F9 365 aa13.71□□□□□ -0.21
RNF40-208ENST00000565995 LOC400499M0QZD8 3231 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 TISP43B9A030 160 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 TNFRSF10BO14763 440 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 NFATC1O95644 943 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 CAPNS1P04632 268 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 ADSSP30520 456 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 P2RY2P41231 377 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 DPP6P42658 865 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 MAGEA11P43364 429 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 PDE6CP51160 858 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 ZXDBP98169 803 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 PSMD2Q13200 908 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 POSTNQ15063 836 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 HSF5Q4G112 596 aaPredicted RBP13.7□□□□□ -0.22
RNF40-208ENST00000565995 SDHAF4Q5VUM1 108 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 FAM171BQ6P995 826 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 SLC23A3Q6PIS1 610 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 LRSAM1Q6UWE0 723 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 ZNF720Q7Z2F6 126 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 LIMS2Q7Z4I7 341 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 PIP4P1Q86T03 277 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 ADGRG2Q8IZP9 1017 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 STKLD1Q8NE28 680 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 MDGA1Q8NFP4 955 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 HVCN1Q96D96 273 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 DDX43Q9NXZ2 648 aaKnown RBP13.7□□□□□ -0.22
RNF40-208ENST00000565995 L1RE1Q9UN81 338 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 INVSQ9Y283 1065 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 MSRB2Q9Y3D2 182 aa13.7□□□□□ -0.22
RNF40-208ENST00000565995 GCN1Q92616 2671 aaKnown RBP13.69□□□□□ -0.22
RNF40-208ENST00000565995 PPP1R37O75864 691 aa13.69□□□□□ -0.22
RNF40-208ENST00000565995 CKMP06732 381 aa13.69□□□□□ -0.22
RNF40-208ENST00000565995 HDCP19113 662 aa13.69□□□□□ -0.22
RNF40-208ENST00000565995 SPINK2P20155 84 aa13.69□□□□□ -0.22
RNF40-208ENST00000565995 EIF2DP41214 584 aaKnown RBP13.69□□□□□ -0.22
RNF40-208ENST00000565995 LHX1P48742 406 aa13.69□□□□□ -0.22
RNF40-208ENST00000565995 MYL7Q01449 175 aa13.69□□□□□ -0.22
RNF40-208ENST00000565995 ZC2HC1CQ53FD0 456 aaPredicted RBP13.69□□□□□ -0.22
RNF40-208ENST00000565995 TMEM92Q6UXU6 159 aa13.69□□□□□ -0.22
RNF40-208ENST00000565995 SYT12Q8IV01 421 aa13.69□□□□□ -0.22
RNF40-208ENST00000565995 LRRC52Q8N7C0 313 aa13.69□□□□□ -0.22
RNF40-208ENST00000565995 ARL14EPQ8N8R7 260 aaPredicted RBP13.69□□□□□ -0.22
RNF40-208ENST00000565995 SH3RF2Q8TEC5 729 aa13.69□□□□□ -0.22
RNF40-208ENST00000565995 RAD54LQ92698 747 aa13.69□□□□□ -0.22
RNF40-208ENST00000565995 CALML4Q96GE6 196 aa13.69□□□□□ -0.22
RNF40-208ENST00000565995 SPATA17Q96L03 361 aa13.69□□□□□ -0.22
RNF40-208ENST00000565995 TPSD1Q9BZJ3 242 aa13.69□□□□□ -0.22
RNF40-208ENST00000565995 GTF3C4Q9UKN8 822 aa13.69□□□□□ -0.22
RNF40-208ENST00000565995 C2orf78A6NCI8 922 aa13.68□□□□□ -0.22
RNF40-208ENST00000565995 HUS1O60921 280 aa13.68□□□□□ -0.22
RNF40-208ENST00000565995 ALDH1A2O94788 518 aa13.68□□□□□ -0.22
RNF40-208ENST00000565995 HNRNPLP14866 589 aaKnown RBP eCLIP13.68□□□□□ -0.22
RNF40-208ENST00000565995 HOXD12P35452 270 aa13.68□□□□□ -0.22
RNF40-208ENST00000565995 UBA7P41226 1012 aa13.68□□□□□ -0.22
RNF40-208ENST00000565995 DHPSP49366 369 aaPredicted RBP13.68□□□□□ -0.22
RNF40-208ENST00000565995 SEMA3BQ13214 749 aa13.68□□□□□ -0.22
RNF40-208ENST00000565995 MCM6Q14566 821 aa13.68□□□□□ -0.22
RNF40-208ENST00000565995 ACAP1Q15027 740 aa13.68□□□□□ -0.22
RNF40-208ENST00000565995 C2orf27AQ580R0 203 aa13.68□□□□□ -0.22
RNF40-208ENST00000565995 ANO7Q6IWH7 933 aa13.68□□□□□ -0.22
RNF40-208ENST00000565995 DPH6Q7L8W6 267 aa13.68□□□□□ -0.22
RNF40-208ENST00000565995 TOP6BLQ8N6T0 577 aa13.68□□□□□ -0.22
RNF40-208ENST00000565995 C1orf127Q8N9H9 656 aa13.68□□□□□ -0.22
RNF40-208ENST00000565995 DEFB124Q8NES8 71 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms