RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 ACAP3Q96P50 834 aa12.07□□□□□ -0.48
CAPN3-215ENST00000565559 PNMA5Q96PV4 448 aa12.07□□□□□ -0.48
CAPN3-215ENST00000565559 HSD17B14Q9BPX1 270 aa12.07□□□□□ -0.48
CAPN3-215ENST00000565559 PRORYQ9H606 182 aa12.07□□□□□ -0.48
CAPN3-215ENST00000565559 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.07□□□□□ -0.48
CAPN3-215ENST00000565559 SUSD2Q9UGT4 822 aa12.07□□□□□ -0.48
CAPN3-215ENST00000565559 TNFSF13BQ9Y275 285 aa12.07□□□□□ -0.48
CAPN3-215ENST00000565559 TIMM13Q9Y5L4 95 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-215ENST00000565559 M0QZQ0 153 aa12.06□□□□□ -0.48
CAPN3-215ENST00000565559 LARGE1O95461 756 aa12.06□□□□□ -0.48
CAPN3-215ENST00000565559 EDN1P05305 212 aa12.06□□□□□ -0.48
CAPN3-215ENST00000565559 ZNF33AQ06730 810 aa12.06□□□□□ -0.48
CAPN3-215ENST00000565559 PLEKHG6Q3KR16 790 aa12.06□□□□□ -0.48
CAPN3-215ENST00000565559 ZNF568Q3ZCX4 644 aa12.06□□□□□ -0.48
CAPN3-215ENST00000565559 HSF5Q4G112 596 aaPredicted RBP12.06□□□□□ -0.48
CAPN3-215ENST00000565559 EOGTQ5NDL2 527 aa12.06□□□□□ -0.48
CAPN3-215ENST00000565559 OVOS1Q6IE37 1185 aa12.06□□□□□ -0.48
CAPN3-215ENST00000565559 DSTYKQ6XUX3 929 aa12.06□□□□□ -0.48
CAPN3-215ENST00000565559 TTC9BQ8N6N2 239 aa12.06□□□□□ -0.48
CAPN3-215ENST00000565559 CEP120Q8N960 986 aa12.06□□□□□ -0.48
CAPN3-215ENST00000565559 SETD7Q8WTS6 366 aaKnown RBP12.06□□□□□ -0.48
CAPN3-215ENST00000565559 MRPS31Q92665 395 aaKnown RBP12.06□□□□□ -0.48
CAPN3-215ENST00000565559 IFT74Q96LB3 600 aa12.06□□□□□ -0.48
CAPN3-215ENST00000565559 SLC6A16Q9GZN6 736 aa12.06□□□□□ -0.48
CAPN3-215ENST00000565559 FAM124BQ9H5Z6 455 aaPredicted RBP12.06□□□□□ -0.48
CAPN3-215ENST00000565559 CNTN3Q9P232 1028 aa12.06□□□□□ -0.48
CAPN3-215ENST00000565559 PCOLCE2Q9UKZ9 415 aa12.06□□□□□ -0.48
CAPN3-215ENST00000565559 STK36Q9NRP7 1315 aa12.06□□□□□ -0.48
CAPN3-215ENST00000565559 GON4LQ3T8J9 2241 aa12.05□□□□□ -0.48
CAPN3-215ENST00000565559 TEX51A0A1B0GUA7 166 aa12.05□□□□□ -0.48
CAPN3-215ENST00000565559 A0A1W2PQD8 194 aa12.05□□□□□ -0.48
CAPN3-215ENST00000565559 E9PAM4 449 aa12.05□□□□□ -0.48
CAPN3-215ENST00000565559 K7EQS6 105 aa12.05□□□□□ -0.48
CAPN3-215ENST00000565559 RRP8O43159 456 aaKnown RBP12.05□□□□□ -0.48
CAPN3-215ENST00000565559 GJB3O75712 270 aa12.05□□□□□ -0.48
CAPN3-215ENST00000565559 CTDNEP1O95476 244 aa12.05□□□□□ -0.48
CAPN3-215ENST00000565559 NFATC1O95644 943 aa12.05□□□□□ -0.48
CAPN3-215ENST00000565559 GNSP15586 552 aa12.05□□□□□ -0.48
CAPN3-215ENST00000565559 NT5DC1Q5TFE4 455 aa12.05□□□□□ -0.48
CAPN3-215ENST00000565559 DEFB119Q8N690 84 aa12.05□□□□□ -0.48
CAPN3-215ENST00000565559 ALLCQ8N6M5 410 aa12.05□□□□□ -0.48
CAPN3-215ENST00000565559 NECAB1Q8N987 351 aa12.05□□□□□ -0.48
CAPN3-215ENST00000565559 TXNDC5Q8NBS9 432 aaKnown RBP12.05□□□□□ -0.48
CAPN3-215ENST00000565559 BSNDQ8WZ55 320 aa12.05□□□□□ -0.48
CAPN3-215ENST00000565559 PI4K2AQ9BTU6 479 aa12.05□□□□□ -0.48
CAPN3-215ENST00000565559 ZDHHC5Q9C0B5 715 aa12.05□□□□□ -0.48
CAPN3-215ENST00000565559 CDT1Q9H211 546 aa12.05□□□□□ -0.48
CAPN3-215ENST00000565559 PCDHA12Q9UN75 941 aa12.05□□□□□ -0.48
CAPN3-215ENST00000565559 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.05□□□□□ -0.48
CAPN3-215ENST00000565559 WNT6Q9Y6F9 365 aa12.05□□□□□ -0.48
CAPN3-215ENST00000565559 PI4KAP42356 2102 aa12.04□□□□□ -0.48
CAPN3-215ENST00000565559 PLXNB3Q9ULL4 1909 aa12.04□□□□□ -0.48
CAPN3-215ENST00000565559 TCRBV21S2A2A0A5A6 115 aa12.04□□□□□ -0.48
CAPN3-215ENST00000565559 K7ERI5 159 aa12.04□□□□□ -0.48
CAPN3-215ENST00000565559 CBFA2T3O75081 653 aa12.04□□□□□ -0.48
CAPN3-215ENST00000565559 KLF8O95600 359 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-215ENST00000565559 ATF6P18850 670 aa12.04□□□□□ -0.48
CAPN3-215ENST00000565559 ITPKBP27987 946 aa12.04□□□□□ -0.48
CAPN3-215ENST00000565559 NMT1P30419 496 aaKnown RBP12.04□□□□□ -0.48
CAPN3-215ENST00000565559 NLRP12P59046 1061 aa12.04□□□□□ -0.48
CAPN3-215ENST00000565559 FAM160A1Q05DH4 1040 aa12.04□□□□□ -0.48
CAPN3-215ENST00000565559 EML3Q32P44 896 aa12.04□□□□□ -0.48
CAPN3-215ENST00000565559 TXNDC8Q6A555 127 aa12.04□□□□□ -0.48
CAPN3-215ENST00000565559 GPR155Q7Z3F1 870 aa12.04□□□□□ -0.48
CAPN3-215ENST00000565559 MON1AQ86VX9 555 aa12.04□□□□□ -0.48
CAPN3-215ENST00000565559 GIPC2Q8TF65 315 aa12.04□□□□□ -0.48
CAPN3-215ENST00000565559 WASF1Q92558 559 aa12.04□□□□□ -0.48
CAPN3-215ENST00000565559 CDC6Q99741 560 aa12.04□□□□□ -0.48
CAPN3-215ENST00000565559 LLPHQ9BRT6 129 aaKnown RBP12.04□□□□□ -0.48
CAPN3-215ENST00000565559 TCHPQ9BT92 498 aa12.04□□□□□ -0.48
CAPN3-215ENST00000565559 KIFC3Q9BVG8 833 aa12.04□□□□□ -0.48
CAPN3-215ENST00000565559 TTC12Q9H892 705 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-215ENST00000565559 DACH1Q9UI36 760 aa12.04□□□□□ -0.48
CAPN3-215ENST00000565559 A0A087WWV3 80 aa12.03□□□□□ -0.48
CAPN3-215ENST00000565559 RNF223E7ERA6 249 aa12.03□□□□□ -0.48
CAPN3-215ENST00000565559 SGK1O00141 431 aa12.03□□□□□ -0.48
CAPN3-215ENST00000565559 ZBTB24O43167 697 aaPredicted RBP12.03□□□□□ -0.48
CAPN3-215ENST00000565559 MCF2P10911 925 aa12.03□□□□□ -0.48
CAPN3-215ENST00000565559 HLA-EP13747 358 aa12.03□□□□□ -0.48
CAPN3-215ENST00000565559 HNRNPLP14866 589 aaKnown RBP eCLIP12.03□□□□□ -0.48
CAPN3-215ENST00000565559 TYMPP19971 482 aa12.03□□□□□ -0.48
CAPN3-215ENST00000565559 DMP1Q13316 513 aaPredicted RBP12.03□□□□□ -0.48
CAPN3-215ENST00000565559 SLC39A12Q504Y0 691 aa12.03□□□□□ -0.48
CAPN3-215ENST00000565559 SYCP2LQ5T4T6 812 aa12.03□□□□□ -0.48
CAPN3-215ENST00000565559 EFCAB13Q8IY85 973 aa12.03□□□□□ -0.48
CAPN3-215ENST00000565559 RGL4Q8IZJ4 473 aa12.03□□□□□ -0.48
CAPN3-215ENST00000565559 NSUN7Q8NE18 718 aaKnown RBP12.03□□□□□ -0.48
CAPN3-215ENST00000565559 RIN3Q8TB24 985 aa12.03□□□□□ -0.48
CAPN3-215ENST00000565559 C2orf15Q8WU43 125 aaKnown RBP12.03□□□□□ -0.48
CAPN3-215ENST00000565559 NXPE2Q96DL1 559 aa12.03□□□□□ -0.48
CAPN3-215ENST00000565559 MRPL4Q9BYD3 311 aaKnown RBP12.03□□□□□ -0.48
CAPN3-215ENST00000565559 PRDM9Q9NQV7 894 aa12.03□□□□□ -0.48
CAPN3-215ENST00000565559 ORC3Q9UBD5 711 aaPredicted RBP12.03□□□□□ -0.48
CAPN3-215ENST00000565559 TUBGCP4Q9UGJ1 667 aa12.03□□□□□ -0.48
CAPN3-215ENST00000565559 SHROOM3Q8TF72 1996 aa12.03□□□□□ -0.48
CAPN3-215ENST00000565559 PCDH15Q96QU1 1955 aa12.02□□□□□ -0.49
CAPN3-215ENST00000565559 MYMKA6NI61 221 aa12.02□□□□□ -0.49
CAPN3-215ENST00000565559 F11P03951 625 aa12.02□□□□□ -0.49
CAPN3-215ENST00000565559 CKMP06732 381 aa12.02□□□□□ -0.49
CAPN3-215ENST00000565559 USP17L7P0C7H9 530 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms