RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 PARD3BQ8TEW8 1205 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 NELL1Q92832 810 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 ELMO3Q96BJ8 720 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 MSANTD3Q96H12 275 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 SLC22A12Q96S37 553 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 FAM83CQ9BQN1 747 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 GOLPH3LQ9H4A5 285 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 DPEP3Q9H4B8 488 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 GDPD2Q9HCC8 539 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 TDP1Q9NUW8 608 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 TMEM30AQ9NV96 361 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 MAGEC2Q9UBF1 373 aaPredicted RBP10.72□□□□□ -0.69
CMTM3-209ENST00000565003 UXTQ9UBK9 157 aaPredicted RBP10.72□□□□□ -0.69
CMTM3-209ENST00000565003 CFAP54Q96N23 3096 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 GREB1Q4ZG55 1949 aa10.72□□□□□ -0.69
CMTM3-209ENST00000565003 OTOL1A6NHN0 477 aaPredicted RBP10.71□□□□□ -0.69
CMTM3-209ENST00000565003 SOBPA7XYQ1 873 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 PDXKO00764 312 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 VNN1O95497 513 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 C4BPAP04003 597 aaKnown RBP10.71□□□□□ -0.69
CMTM3-209ENST00000565003 NR3C1P04150 777 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 TDGF1P13385 188 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 KCNA4P22459 653 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 ATICP31939 592 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 GRIK1P39086 918 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 CACNA2D1P54289 1103 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 USP46P62068 366 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 DLG4P78352 724 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 DPYDQ12882 1025 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 BIRC3Q13489 604 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 TRPC3Q13507 836 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 PON2Q15165 354 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 TRIM68Q6AZZ1 485 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 C1orf228Q6PIY5 440 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 Q6ZS52 159 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 FSIP1Q8NA03 581 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 ZBTB44Q8NCP5 570 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 MYCBPAPQ8TBZ2 947 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 TMEM174Q8WUU8 243 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 SYAP1Q96A49 352 aaPredicted RBP10.71□□□□□ -0.69
CMTM3-209ENST00000565003 CHFRQ96EP1 664 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 CYP2S1Q96SQ9 504 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 IER2Q9BTL4 223 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 SNX25Q9H3E2 840 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 SMYD3Q9H7B4 428 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 VRTNQ9H8Y1 702 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 KIF9Q9HAQ2 790 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 TRPC7Q9HCX4 862 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 HPS4Q9NQG7 708 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 GKN1Q9NS71 199 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 THG1LQ9NWX6 298 aaKnown RBP10.71□□□□□ -0.69
CMTM3-209ENST00000565003 NXF1Q9UBU9 619 aaKnown RBP10.71□□□□□ -0.69
CMTM3-209ENST00000565003 PCDHGA2Q9Y5H1 932 aa10.71□□□□□ -0.69
CMTM3-209ENST00000565003 ZNF638Q14966 1978 aaKnown RBP10.7□□□□□ -0.7
CMTM3-209ENST00000565003 ANAPC1Q9H1A4 1944 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 A0A1W2PQ27 194 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 A0A1W2PQ64 194 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 A0A1W2PQD8 194 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 C2orf78A6NCI8 922 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 A8MXQ7 604 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 F8VP50 259 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 CLDN5O00501 218 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 KINO60870 393 aaKnown RBP10.7□□□□□ -0.7
CMTM3-209ENST00000565003 LILRB5O75023 590 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 PHACTR2O75167 634 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 RHOBTB3O94955 611 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 ARSAP15289 507 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 PTPN1P18031 435 aaKnown RBP10.7□□□□□ -0.7
CMTM3-209ENST00000565003 RAP1GAPP47736 663 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 SATB1Q01826 763 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 USP4Q13107 963 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 NCOA4Q13772 614 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 CCINQ13939 588 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 ZNF268Q14587 947 aaPredicted RBP10.7□□□□□ -0.7
CMTM3-209ENST00000565003 ZNF77Q15935 545 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 ZNF699Q32M78 642 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 ITPRIPL2Q3MIP1 535 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 SCARA5Q6ZMJ2 495 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 MAMSTRQ6ZN01 415 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 KRBA2Q6ZNG9 492 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 DENND5BQ6ZUT9 1274 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 B3GALNT2Q8NCR0 500 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 SPATA17Q96L03 361 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 ZNF518BQ9C0D4 1074 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 SCAND2PQ9GZW5 306 aaPredicted RBP10.7□□□□□ -0.7
CMTM3-209ENST00000565003 EBF3Q9H4W6 596 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 C2orf42Q9NWW7 574 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 ZSCAN32Q9NX65 697 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 GCNT4Q9P109 453 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 MAPK8IP1Q9UQF2 711 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 TRAF3IP3Q9Y228 551 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 ATP6V1DQ9Y5K8 247 aa10.7□□□□□ -0.7
CMTM3-209ENST00000565003 TRAV19A0A0A6YYK7 116 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 TRIM66O15016 1216 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 CLSTN1O94985 981 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 CKMP06732 381 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 FAM163BP0C2L3 166 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 USP17L7P0C7H9 530 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 ANXA13P27216 316 aa10.69□□□□□ -0.7
CMTM3-209ENST00000565003 CCR3P51677 355 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms