RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 A8MXQ7 604 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 TMCC1O94876 653 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 IFNB1P01574 187 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 CDK4P11802 303 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 MYCLP12524 364 aaPredicted RBP17.04■□□□□ 0.32
LINC00554-201ENST00000564841 SREBF1P36956 1147 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 RAP1GDS1P52306 607 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 ALDH18A1P54886 795 aaKnown RBP17.04■□□□□ 0.32
LINC00554-201ENST00000564841 GK3PQ14409 553 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 SYCP2LQ5T4T6 812 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 ACAD11Q709F0 780 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 PDSS2Q86YH6 399 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 SMC1BQ8NDV3 1235 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 PLEKHO2Q8TD55 490 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 GRK7Q8WTQ7 553 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 CPA5Q8WXQ8 436 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 WNK4Q96J92 1243 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 WRNIP1Q96S55 665 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 CENPFP49454 3210 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 KAT6AQ92794 2004 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 CCDC195A0A1B0GUA6 201 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 PEX10O60683 326 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 GAS7O60861 476 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 PDE5AO76074 875 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 OATP04181 439 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 ARSEP51690 589 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 EPHB1P54762 984 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 ADARP55265 1226 aaKnown RBP17.04■□□□□ 0.32
LINC00554-201ENST00000564841 ASPHQ12797 758 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 UBAP2LQ14157 1087 aaKnown RBP17.04■□□□□ 0.32
LINC00554-201ENST00000564841 ACAP1Q15027 740 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 ZFYVE27Q5T4F4 411 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 METTL25Q8N6Q8 603 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 SLC26A7Q8TE54 656 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 GCNAQ96QF7 691 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 CBWD1Q9BRT8 395 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 KIFC3Q9BVG8 833 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 TSPYL2Q9H2G4 693 aaPredicted RBP17.04■□□□□ 0.32
LINC00554-201ENST00000564841 GPRC5CQ9NQ84 441 aa17.04■□□□□ 0.32
LINC00554-201ENST00000564841 FOSP01100 380 aaPredicted RBP17.03■□□□□ 0.32
LINC00554-201ENST00000564841 EIF2AK2P19525 551 aaKnown RBP17.03■□□□□ 0.32
LINC00554-201ENST00000564841 MMEL1Q495T6 779 aa17.03■□□□□ 0.32
LINC00554-201ENST00000564841 MSS51Q4VC12 460 aa17.03■□□□□ 0.32
LINC00554-201ENST00000564841 SPDYAQ5MJ70 313 aa17.03■□□□□ 0.32
LINC00554-201ENST00000564841 KLHDC10Q6PID8 442 aa17.03■□□□□ 0.32
LINC00554-201ENST00000564841 TRPM4Q8TD43 1214 aa17.03■□□□□ 0.32
LINC00554-201ENST00000564841 GRIP2Q9C0E4 1043 aa17.03■□□□□ 0.32
LINC00554-201ENST00000564841 PARVGQ9HBI0 331 aa17.03■□□□□ 0.32
LINC00554-201ENST00000564841 PSMC3IPQ9P2W1 217 aaPredicted RBP17.03■□□□□ 0.32
LINC00554-201ENST00000564841 PLA2G4CQ9UP65 541 aa17.03■□□□□ 0.32
LINC00554-201ENST00000564841 ZNF148Q9UQR1 794 aa17.03■□□□□ 0.32
LINC00554-201ENST00000564841 CIB2O75838 187 aa17.03■□□□□ 0.32
LINC00554-201ENST00000564841 MTA2O94776 668 aa17.03■□□□□ 0.32
LINC00554-201ENST00000564841 TCF4P15884 667 aa17.03■□□□□ 0.32
LINC00554-201ENST00000564841 SP4Q02446 784 aa17.03■□□□□ 0.32
LINC00554-201ENST00000564841 CBX3Q13185 183 aa17.03■□□□□ 0.32
LINC00554-201ENST00000564841 PDK3Q15120 406 aa17.03■□□□□ 0.32
LINC00554-201ENST00000564841 RALGPS1Q5JS13 557 aa17.03■□□□□ 0.32
LINC00554-201ENST00000564841 MAP7D3Q8IWC1 876 aa17.03■□□□□ 0.32
LINC00554-201ENST00000564841 POU5F2Q8N7G0 328 aa17.03■□□□□ 0.32
LINC00554-201ENST00000564841 TEPSINQ96N21 525 aa17.03■□□□□ 0.32
LINC00554-201ENST00000564841 FIZ1Q96SL8 496 aa17.03■□□□□ 0.32
LINC00554-201ENST00000564841 MIS12Q9H081 205 aa17.03■□□□□ 0.32
LINC00554-201ENST00000564841 GTF3C4Q9UKN8 822 aa17.03■□□□□ 0.32
LINC00554-201ENST00000564841 PACSIN3Q9UKS6 424 aa17.03■□□□□ 0.32
LINC00554-201ENST00000564841 SOX10P56693 466 aa17.02■□□□□ 0.32
LINC00554-201ENST00000564841 PRPF39Q86UA1 669 aaKnown RBP17.02■□□□□ 0.32
LINC00554-201ENST00000564841 IL31RAQ8NI17 732 aa17.02■□□□□ 0.32
LINC00554-201ENST00000564841 RIN3Q8TB24 985 aa17.02■□□□□ 0.32
LINC00554-201ENST00000564841 CLUHO75153 1309 aa17.02■□□□□ 0.32
LINC00554-201ENST00000564841 CYP3A7-CYP3A51PA0A087WV96 503 aa17.02■□□□□ 0.32
LINC00554-201ENST00000564841 PRR5-ARHGAP8B1AHC4 643 aa17.02■□□□□ 0.32
LINC00554-201ENST00000564841 K7ENM7 598 aa17.02■□□□□ 0.32
LINC00554-201ENST00000564841 TM7SF2O76062 418 aa17.02■□□□□ 0.32
LINC00554-201ENST00000564841 ABHD2P08910 425 aa17.02■□□□□ 0.32
LINC00554-201ENST00000564841 CYP11B1P15538 503 aa17.02■□□□□ 0.32
LINC00554-201ENST00000564841 CYP3A7P24462 503 aa17.02■□□□□ 0.32
LINC00554-201ENST00000564841 ARHGAP8P85298 464 aa17.02■□□□□ 0.32
LINC00554-201ENST00000564841 KLF1Q13351 362 aaPredicted RBP17.02■□□□□ 0.32
LINC00554-201ENST00000564841 PEX6Q13608 980 aa17.02■□□□□ 0.32
LINC00554-201ENST00000564841 TNFAIP1Q13829 316 aa17.02■□□□□ 0.32
LINC00554-201ENST00000564841 SH3D19Q5HYK7 790 aa17.02■□□□□ 0.32
LINC00554-201ENST00000564841 CES4AQ5XG92 561 aa17.02■□□□□ 0.32
LINC00554-201ENST00000564841 OTOP1Q7RTM1 612 aa17.02■□□□□ 0.32
LINC00554-201ENST00000564841 TMPRSS6Q8IU80 811 aa17.02■□□□□ 0.32
LINC00554-201ENST00000564841 PRPF31Q8WWY3 499 aaKnown RBP17.02■□□□□ 0.32
LINC00554-201ENST00000564841 SEMA4DQ92854 862 aa17.02■□□□□ 0.32
LINC00554-201ENST00000564841 UNC45AQ9H3U1 944 aa17.02■□□□□ 0.32
LINC00554-201ENST00000564841 COL20A1Q9P218 1284 aa17.02■□□□□ 0.32
LINC00554-201ENST00000564841 MTO1Q9Y2Z2 717 aaKnown RBP17.02■□□□□ 0.32
LINC00554-201ENST00000564841 MRPL11Q9Y3B7 192 aaKnown RBP17.02■□□□□ 0.32
LINC00554-201ENST00000564841 ZHX2Q9Y6X8 837 aa17.02■□□□□ 0.32
LINC00554-201ENST00000564841 GREB1LQ9C091 1923 aaPredicted RBP17.02■□□□□ 0.31
LINC00554-201ENST00000564841 TFAP2AP05549 437 aa17.02■□□□□ 0.31
LINC00554-201ENST00000564841 SMIM18P0DKX4 95 aa17.02■□□□□ 0.31
LINC00554-201ENST00000564841 HMGCS2P54868 508 aa17.02■□□□□ 0.31
LINC00554-201ENST00000564841 NADK2Q4G0N4 442 aa17.02■□□□□ 0.31
LINC00554-201ENST00000564841 C1orf186Q6ZWK4 172 aa17.02■□□□□ 0.31
LINC00554-201ENST00000564841 ZNF720Q7Z2F6 126 aa17.02■□□□□ 0.31
LINC00554-201ENST00000564841 MIPOL1Q8TD10 442 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms