RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 PCDHAC1Q9H158 963 aa5.72□□□□□ -1.49
CDH1-207ENST00000564745 DHX36Q9H2U1 1008 aaKnown RBP5.72□□□□□ -1.49
CDH1-207ENST00000564745 GBA2Q9HCG7 927 aaPredicted RBP5.72□□□□□ -1.49
CDH1-207ENST00000564745 ZSCAN32Q9NX65 697 aa5.72□□□□□ -1.49
CDH1-207ENST00000564745 NDRG4Q9ULP0 352 aaKnown RBP5.72□□□□□ -1.49
CDH1-207ENST00000564745 ZMYND8Q9ULU4 1186 aaPredicted RBP5.72□□□□□ -1.49
CDH1-207ENST00000564745 CAPN11Q9UMQ6 739 aa5.72□□□□□ -1.49
CDH1-207ENST00000564745 SCAF8Q9UPN6 1271 aaKnown RBP5.72□□□□□ -1.49
CDH1-207ENST00000564745 SSX2IPQ9Y2D8 614 aa5.72□□□□□ -1.49
CDH1-207ENST00000564745 UNC119BA6NIH7 251 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 E7ENX8 843 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 RNASET2O00584 256 aaKnown RBP5.71□□□□□ -1.5
CDH1-207ENST00000564745 TRIM38O00635 465 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 HNRNPDLO14979 420 aaKnown RBP5.71□□□□□ -1.5
CDH1-207ENST00000564745 PIP5K1BO14986 540 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 CCP110O43303 1012 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 KCNQ3O43525 872 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 SRGAP2O75044 1071 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 PIAS2O75928 621 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 TNFRSF6BO95407 300 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 CSF1RP07333 972 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 PDHA1P08559 390 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 PECAM1P16284 738 aaPredicted RBP5.71□□□□□ -1.5
CDH1-207ENST00000564745 ADORA2AP29274 412 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 RPS7P62081 194 aaKnown RBP5.71□□□□□ -1.5
CDH1-207ENST00000564745 TAP2Q03519 686 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 CDSNQ15517 529 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 INSCQ1MX18 579 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 BEAN1Q3B7T3 259 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 ZACNQ401N2 412 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 TMTC4Q5T4D3 741 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 RGS7BPQ6MZT1 257 aaPredicted RBP5.71□□□□□ -1.5
CDH1-207ENST00000564745 TLDC1Q6P9B6 456 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 CACNA2D3Q8IZS8 1091 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 CCDC150Q8NCX0 1101 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 CPEB3Q8NE35 698 aaKnown RBP5.71□□□□□ -1.5
CDH1-207ENST00000564745 PTDSS2Q9BVG9 487 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 KRTAP3-1Q9BYR8 98 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 UNKLQ9H9P5 680 aaKnown RBP5.71□□□□□ -1.5
CDH1-207ENST00000564745 LRFN1Q9P244 771 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 SERTAD3Q9UJW9 196 aa5.71□□□□□ -1.5
CDH1-207ENST00000564745 A0A0B4J269 797 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 CCDC189A1A4V9 331 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 MYADML2A6NDP7 307 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 GOLGA6L3A6NEY3 463 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 MUSKO15146 869 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 LPXNO60711 386 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 SKAP2O75563 359 aaPredicted RBP5.7□□□□□ -1.5
CDH1-207ENST00000564745 HGFP14210 728 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 VEGFAP15692 232 aaPredicted RBP5.7□□□□□ -1.5
CDH1-207ENST00000564745 CD6P30203 668 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 LRPAP1P30533 357 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 HNRNPMP52272 730 aaKnown RBP eCLIP5.7□□□□□ -1.5
CDH1-207ENST00000564745 PRKAG1P54619 331 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 TUBB3Q13509 450 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 SPARCL1Q14515 664 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 PDCD2Q16342 344 aaPredicted RBP5.7□□□□□ -1.5
CDH1-207ENST00000564745 USP39Q53GS9 565 aaKnown RBP5.7□□□□□ -1.5
CDH1-207ENST00000564745 SPDYAQ5MJ70 313 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 LDHAL6AQ6ZMR3 332 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 MICALCLQ6ZW33 695 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 C1orf210Q8IVY1 113 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 CCDC28AQ8IWP9 274 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 CCT6BQ92526 530 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 SNX19Q92543 992 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 ZBTB45Q96K62 511 aaPredicted RBP5.7□□□□□ -1.5
CDH1-207ENST00000564745 SNX27Q96L92 541 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 RMDN3Q96TC7 470 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.7□□□□□ -1.5
CDH1-207ENST00000564745 MAGEH1Q9H213 219 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 TM7SF3Q9NS93 570 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 SMPD4Q9NXE4 827 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 DKK2Q9UBU2 259 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 NOX1Q9Y5S8 564 aa5.7□□□□□ -1.5
CDH1-207ENST00000564745 hCG_1642624A0A1W2PR95 340 aa5.69□□□□□ -1.5
CDH1-207ENST00000564745 AGPSO00116 658 aa5.69□□□□□ -1.5
CDH1-207ENST00000564745 ACKR2O00590 384 aa5.69□□□□□ -1.5
CDH1-207ENST00000564745 RGS10O43665 173 aa5.69□□□□□ -1.5
CDH1-207ENST00000564745 INMTO95050 263 aa5.69□□□□□ -1.5
CDH1-207ENST00000564745 SPDEFO95238 335 aa5.69□□□□□ -1.5
CDH1-207ENST00000564745 LMNAP02545 664 aaKnown RBP5.69□□□□□ -1.5
CDH1-207ENST00000564745 EGR1P18146 543 aa5.69□□□□□ -1.5
CDH1-207ENST00000564745 NTSR1P30989 418 aa5.69□□□□□ -1.5
CDH1-207ENST00000564745 GRK6P43250 576 aa5.69□□□□□ -1.5
CDH1-207ENST00000564745 VAV2P52735 878 aa5.69□□□□□ -1.5
CDH1-207ENST00000564745 TMEM95Q3KNT9 176 aa5.69□□□□□ -1.5
CDH1-207ENST00000564745 MANEALQ5VSG8 457 aa5.69□□□□□ -1.5
CDH1-207ENST00000564745 LIN54Q6MZP7 749 aa5.69□□□□□ -1.5
CDH1-207ENST00000564745 SUGP1Q8IWZ8 645 aaKnown RBP5.69□□□□□ -1.5
CDH1-207ENST00000564745 FAM109AQ8N4B1 249 aa5.69□□□□□ -1.5
CDH1-207ENST00000564745 ZNF276Q8N554 614 aa5.69□□□□□ -1.5
CDH1-207ENST00000564745 SLC30A5Q8TAD4 765 aa5.69□□□□□ -1.5
CDH1-207ENST00000564745 CXorf38Q8TB03 319 aa5.69□□□□□ -1.5
CDH1-207ENST00000564745 ZNF384Q8TF68 577 aa5.69□□□□□ -1.5
CDH1-207ENST00000564745 BOD1Q96IK1 185 aa5.69□□□□□ -1.5
CDH1-207ENST00000564745 SORBS1Q9BX66 1292 aaKnown RBP5.69□□□□□ -1.5
CDH1-207ENST00000564745 EIF2AQ9BY44 585 aaKnown RBP5.69□□□□□ -1.5
CDH1-207ENST00000564745 AMBRA1Q9C0C7 1298 aa5.69□□□□□ -1.5
CDH1-207ENST00000564745 AGO4Q9HCK5 861 aaKnown RBP5.69□□□□□ -1.5
CDH1-207ENST00000564745 GALNT9Q9HCQ5 603 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms