RNA–Protein interactions for RNA: ENST00000564662.1

COTL1-204, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 2

Gene COTL1, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-204ENST00000564662 CCDC192P0DO97 292 aa21.47■■□□□ 1.03
COTL1-204ENST00000564662 LMO2P25791 158 aa21.47■■□□□ 1.03
COTL1-204ENST00000564662 GJA4P35212 333 aa21.47■■□□□ 1.03
COTL1-204ENST00000564662 IFNAR2P48551 515 aa21.47■■□□□ 1.03
COTL1-204ENST00000564662 AMPD2Q01433 879 aa21.47■■□□□ 1.03
COTL1-204ENST00000564662 KCNB1Q14721 858 aa21.47■■□□□ 1.03
COTL1-204ENST00000564662 SURF1Q15526 300 aa21.47■■□□□ 1.03
COTL1-204ENST00000564662 E2F4Q16254 413 aa21.47■■□□□ 1.03
COTL1-204ENST00000564662 ARL14EPQ8N8R7 260 aaPredicted RBP21.47■■□□□ 1.03
COTL1-204ENST00000564662 FSIP1Q8NA03 581 aa21.47■■□□□ 1.03
COTL1-204ENST00000564662 LINC00301Q8NCQ3 95 aa21.47■■□□□ 1.03
COTL1-204ENST00000564662 GAB3Q8WWW8 586 aa21.47■■□□□ 1.03
COTL1-204ENST00000564662 ATP2A3Q93084 1043 aa21.47■■□□□ 1.03
COTL1-204ENST00000564662 DHX58Q96C10 678 aa21.47■■□□□ 1.03
COTL1-204ENST00000564662 HHIPQ96QV1 700 aa21.47■■□□□ 1.03
COTL1-204ENST00000564662 P2RY13Q9BPV8 354 aa21.47■■□□□ 1.03
COTL1-204ENST00000564662 TRIM9Q9C026 710 aa21.47■■□□□ 1.03
COTL1-204ENST00000564662 ECT2Q9H8V3 914 aa21.47■■□□□ 1.03
COTL1-204ENST00000564662 FBRSL1Q9HCM7 1045 aaKnown RBP21.47■■□□□ 1.03
COTL1-204ENST00000564662 CRTAC1Q9NQ79 661 aa21.47■■□□□ 1.03
COTL1-204ENST00000564662 CDH9Q9ULB4 789 aa21.47■■□□□ 1.03
COTL1-204ENST00000564662 SLC30A4O14863 429 aa21.46■■□□□ 1.03
COTL1-204ENST00000564662 ATG13O75143 517 aa21.46■■□□□ 1.03
COTL1-204ENST00000564662 MAGEA11P43364 429 aa21.46■■□□□ 1.03
COTL1-204ENST00000564662 CYP27A1Q02318 531 aa21.46■■□□□ 1.03
COTL1-204ENST00000564662 CCDC6Q16204 474 aa21.46■■□□□ 1.03
COTL1-204ENST00000564662 DUOXA2Q1HG44 320 aa21.46■■□□□ 1.03
COTL1-204ENST00000564662 FAM171BQ6P995 826 aa21.46■■□□□ 1.03
COTL1-204ENST00000564662 DPH6Q7L8W6 267 aa21.46■■□□□ 1.03
COTL1-204ENST00000564662 WDR49Q8IV35 697 aa21.46■■□□□ 1.03
COTL1-204ENST00000564662 OSCP1Q8WVF1 389 aa21.46■■□□□ 1.03
COTL1-204ENST00000564662 MMS19Q96T76 1030 aa21.46■■□□□ 1.03
COTL1-204ENST00000564662 LRRC27Q9C0I9 530 aa21.46■■□□□ 1.03
COTL1-204ENST00000564662 MAGEC2Q9UBF1 373 aaPredicted RBP21.46■■□□□ 1.03
COTL1-204ENST00000564662 K7ELQ4 463 aaPredicted RBP21.45■■□□□ 1.02
COTL1-204ENST00000564662 AXIN1O15169 862 aa21.45■■□□□ 1.02
COTL1-204ENST00000564662 SPTLC2O15270 562 aa21.45■■□□□ 1.02
COTL1-204ENST00000564662 EIF3DO15371 548 aaKnown RBP eCLIP21.45■■□□□ 1.02
COTL1-204ENST00000564662 PDGFRBP09619 1106 aa21.45■■□□□ 1.02
COTL1-204ENST00000564662 DLATP10515 647 aaKnown RBP21.45■■□□□ 1.02
COTL1-204ENST00000564662 DRD1P21728 446 aa21.45■■□□□ 1.02
COTL1-204ENST00000564662 BDNFP23560 247 aa21.45■■□□□ 1.02
COTL1-204ENST00000564662 HOXD13P35453 343 aa21.45■■□□□ 1.02
COTL1-204ENST00000564662 GALK1P51570 392 aa21.45■■□□□ 1.02
COTL1-204ENST00000564662 RDH13Q8NBN7 331 aa21.45■■□□□ 1.02
COTL1-204ENST00000564662 RPLP0P6Q8NHW5 317 aa21.45■■□□□ 1.02
COTL1-204ENST00000564662 SH3RF2Q8TEC5 729 aa21.45■■□□□ 1.02
COTL1-204ENST00000564662 CD101Q93033 1021 aa21.45■■□□□ 1.02
COTL1-204ENST00000564662 CNTNAP3BQ96NU0 1288 aa21.45■■□□□ 1.02
COTL1-204ENST00000564662 CNTNAP3Q9BZ76 1288 aa21.45■■□□□ 1.02
COTL1-204ENST00000564662 CUEDC2Q9H467 287 aa21.45■■□□□ 1.02
COTL1-204ENST00000564662 KBTBD4Q9NVX7 518 aa21.45■■□□□ 1.02
COTL1-204ENST00000564662 GCNT4Q9P109 453 aa21.45■■□□□ 1.02
COTL1-204ENST00000564662 TFIP11Q9UBB9 837 aaKnown RBP21.45■■□□□ 1.02
COTL1-204ENST00000564662 KCNA4P22459 653 aa21.44■■□□□ 1.02
COTL1-204ENST00000564662 WARSP23381 471 aaKnown RBP21.44■■□□□ 1.02
COTL1-204ENST00000564662 ANXA13P27216 316 aa21.44■■□□□ 1.02
COTL1-204ENST00000564662 GRIK1P39086 918 aa21.44■■□□□ 1.02
COTL1-204ENST00000564662 CYP2J2P51589 502 aa21.44■■□□□ 1.02
COTL1-204ENST00000564662 PSMD2Q13200 908 aa21.44■■□□□ 1.02
COTL1-204ENST00000564662 MAPRE1Q15691 268 aaKnown RBP21.44■■□□□ 1.02
COTL1-204ENST00000564662 SNRNP35Q16560 246 aaKnown RBP21.44■■□□□ 1.02
COTL1-204ENST00000564662 EML3Q32P44 896 aa21.44■■□□□ 1.02
COTL1-204ENST00000564662 AASDHQ4L235 1098 aaPredicted RBP21.44■■□□□ 1.02
COTL1-204ENST00000564662 PPM1JQ5JR12 505 aa21.44■■□□□ 1.02
COTL1-204ENST00000564662 FAM26FQ5R3K3 315 aa21.44■■□□□ 1.02
COTL1-204ENST00000564662 LIMS2Q7Z4I7 341 aa21.44■■□□□ 1.02
COTL1-204ENST00000564662 KBTBD6Q86V97 674 aa21.44■■□□□ 1.02
COTL1-204ENST00000564662 EZH1Q92800 747 aaPredicted RBP21.44■■□□□ 1.02
COTL1-204ENST00000564662 EXOC4Q96A65 974 aa21.44■■□□□ 1.02
COTL1-204ENST00000564662 ARRDC1-AS1Q9H2J1 176 aa21.44■■□□□ 1.02
COTL1-204ENST00000564662 KIAA1586Q9HCI6 787 aa21.44■■□□□ 1.02
COTL1-204ENST00000564662 CCDC163A0A0D9SF12 145 aa21.43■■□□□ 1.02
COTL1-204ENST00000564662 PPP6R2O75170 966 aa21.43■■□□□ 1.02
COTL1-204ENST00000564662 TNNI1P19237 187 aa21.43■■□□□ 1.02
COTL1-204ENST00000564662 USP46P62068 366 aa21.43■■□□□ 1.02
COTL1-204ENST00000564662 SF3A2Q15428 464 aaKnown RBP21.43■■□□□ 1.02
COTL1-204ENST00000564662 FBXO43Q4G163 708 aa21.43■■□□□ 1.02
COTL1-204ENST00000564662 MDH1BQ5I0G3 518 aa21.43■■□□□ 1.02
COTL1-204ENST00000564662 VSTM1Q6UX27 236 aa21.43■■□□□ 1.02
COTL1-204ENST00000564662 EPM2AIP1Q7L775 607 aaPredicted RBP21.43■■□□□ 1.02
COTL1-204ENST00000564662 TRAPPC11Q7Z392 1133 aa21.43■■□□□ 1.02
COTL1-204ENST00000564662 CACNA2D4Q7Z3S7 1137 aa21.43■■□□□ 1.02
COTL1-204ENST00000564662 NELFCDQ8IXH7 590 aa21.43■■□□□ 1.02
COTL1-204ENST00000564662 C12orf50Q8NA57 414 aaPredicted RBP21.43■■□□□ 1.02
COTL1-204ENST00000564662 PCED1BQ96HM7 432 aa21.43■■□□□ 1.02
COTL1-204ENST00000564662 SPATA17Q96L03 361 aa21.43■■□□□ 1.02
COTL1-204ENST00000564662 ZNF396Q96N95 335 aaPredicted RBP21.43■■□□□ 1.02
COTL1-204ENST00000564662 FNBP1Q96RU3 617 aa21.43■■□□□ 1.02
COTL1-204ENST00000564662 CGRRF1Q99675 332 aa21.43■■□□□ 1.02
COTL1-204ENST00000564662 MRPL45Q9BRJ2 306 aaKnown RBP21.43■■□□□ 1.02
COTL1-204ENST00000564662 AGPAT3Q9NRZ7 376 aa21.43■■□□□ 1.02
COTL1-204ENST00000564662 CLIC2O15247 247 aa21.42■■□□□ 1.02
COTL1-204ENST00000564662 FOXD2O60548 495 aaPredicted RBP21.42■■□□□ 1.02
COTL1-204ENST00000564662 UBE4BO95155 1302 aa21.42■■□□□ 1.02
COTL1-204ENST00000564662 EPN2O95208 641 aa21.42■■□□□ 1.02
COTL1-204ENST00000564662 HDCP19113 662 aa21.42■■□□□ 1.02
COTL1-204ENST00000564662 AMPD3Q01432 767 aa21.42■■□□□ 1.02
COTL1-204ENST00000564662 FOXD4L5Q5VV16 416 aaPredicted RBP21.42■■□□□ 1.02
COTL1-204ENST00000564662 SHC4Q6S5L8 630 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms