RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 ARHGAP15Q53QZ3 475 aa20.26■□□□□ 0.83
NME3-207ENST00000564628 WDR44Q5JSH3 913 aa20.26■□□□□ 0.83
NME3-207ENST00000564628 TXNDC11Q6PKC3 985 aa20.26■□□□□ 0.83
NME3-207ENST00000564628 Q6ZS52 159 aa20.26■□□□□ 0.83
NME3-207ENST00000564628 TRAPPC11Q7Z392 1133 aa20.26■□□□□ 0.83
NME3-207ENST00000564628 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.26■□□□□ 0.83
NME3-207ENST00000564628 ZC3H3Q8IXZ2 948 aaKnown RBP20.26■□□□□ 0.83
NME3-207ENST00000564628 CSGALNACT2Q8N6G5 542 aa20.26■□□□□ 0.83
NME3-207ENST00000564628 FAM200AQ8TCP9 573 aa20.26■□□□□ 0.83
NME3-207ENST00000564628 ZNF516Q92618 1163 aa20.26■□□□□ 0.83
NME3-207ENST00000564628 LMBRD1Q9NUN5 540 aa20.26■□□□□ 0.83
NME3-207ENST00000564628 GDAP2Q9NXN4 497 aa20.26■□□□□ 0.83
NME3-207ENST00000564628 DSEQ9UL01 958 aa20.26■□□□□ 0.83
NME3-207ENST00000564628 CACNA1BQ00975 2339 aa20.26■□□□□ 0.83
NME3-207ENST00000564628 ACACBO00763 2458 aa20.26■□□□□ 0.83
NME3-207ENST00000564628 TPRP12270 2363 aaKnown RBP20.26■□□□□ 0.83
NME3-207ENST00000564628 LRRIQ3A6PVS8 624 aaPredicted RBP20.25■□□□□ 0.83
NME3-207ENST00000564628 CYB561D2O14569 222 aa20.25■□□□□ 0.83
NME3-207ENST00000564628 AKAP3O75969 853 aa20.25■□□□□ 0.83
NME3-207ENST00000564628 TNNI1P19237 187 aa20.25■□□□□ 0.83
NME3-207ENST00000564628 RPL13P26373 211 aaKnown RBP20.25■□□□□ 0.83
NME3-207ENST00000564628 GABRR2P28476 465 aa20.25■□□□□ 0.83
NME3-207ENST00000564628 TUFMP49411 452 aaKnown RBP20.25■□□□□ 0.83
NME3-207ENST00000564628 ENPEPQ07075 957 aa20.25■□□□□ 0.83
NME3-207ENST00000564628 CCINQ13939 588 aa20.25■□□□□ 0.83
NME3-207ENST00000564628 GPR158Q5T848 1215 aa20.25■□□□□ 0.83
NME3-207ENST00000564628 PRR23CQ6ZRP0 262 aa20.25■□□□□ 0.83
NME3-207ENST00000564628 TTC9BQ8N6N2 239 aa20.25■□□□□ 0.83
NME3-207ENST00000564628 TMC2Q8TDI7 906 aa20.25■□□□□ 0.83
NME3-207ENST00000564628 TASP1Q9H6P5 420 aa20.25■□□□□ 0.83
NME3-207ENST00000564628 GTSE1Q9NYZ3 720 aa20.25■□□□□ 0.83
NME3-207ENST00000564628 ZMYM5Q9UJ78 669 aa20.25■□□□□ 0.83
NME3-207ENST00000564628 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.24■□□□□ 0.83
NME3-207ENST00000564628 KRT19P08727 400 aa20.24■□□□□ 0.83
NME3-207ENST00000564628 CD44P16070 742 aaKnown RBP20.24■□□□□ 0.83
NME3-207ENST00000564628 AP3M2P53677 418 aa20.24■□□□□ 0.83
NME3-207ENST00000564628 C1orf220Q5T0J3 134 aa20.24■□□□□ 0.83
NME3-207ENST00000564628 CEP135Q66GS9 1140 aa20.24■□□□□ 0.83
NME3-207ENST00000564628 LIMS2Q7Z4I7 341 aa20.24■□□□□ 0.83
NME3-207ENST00000564628 BPIFB1Q8TDL5 484 aa20.24■□□□□ 0.83
NME3-207ENST00000564628 ZFYVE19Q96K21 471 aa20.24■□□□□ 0.83
NME3-207ENST00000564628 FRMD4BQ9Y2L6 1034 aa20.24■□□□□ 0.83
NME3-207ENST00000564628 TULP1O00294 542 aaPredicted RBP20.23■□□□□ 0.83
NME3-207ENST00000564628 CDC25CP30307 473 aa20.23■□□□□ 0.83
NME3-207ENST00000564628 PPP1R2P41236 205 aa20.23■□□□□ 0.83
NME3-207ENST00000564628 PMS1P54277 932 aaKnown RBP20.23■□□□□ 0.83
NME3-207ENST00000564628 DLG4P78352 724 aa20.23■□□□□ 0.83
NME3-207ENST00000564628 LRRC63Q05C16 580 aa20.23■□□□□ 0.83
NME3-207ENST00000564628 BFSP1Q12934 665 aa20.23■□□□□ 0.83
NME3-207ENST00000564628 SRSF5Q13243 272 aaKnown RBP20.23■□□□□ 0.83
NME3-207ENST00000564628 ADAM9Q13443 819 aa20.23■□□□□ 0.83
NME3-207ENST00000564628 VEPH1Q14D04 833 aa20.23■□□□□ 0.83
NME3-207ENST00000564628 PON2Q15165 354 aa20.23■□□□□ 0.83
NME3-207ENST00000564628 WSCD1Q658N2 575 aa20.23■□□□□ 0.83
NME3-207ENST00000564628 WDR5BQ86VZ2 330 aa20.23■□□□□ 0.83
NME3-207ENST00000564628 GPIHBP1Q8IV16 184 aa20.23■□□□□ 0.83
NME3-207ENST00000564628 OR10T2Q8NGX3 314 aa20.23■□□□□ 0.83
NME3-207ENST00000564628 SPATA18Q8TC71 538 aa20.23■□□□□ 0.83
NME3-207ENST00000564628 C2orf15Q8WU43 125 aaKnown RBP20.23■□□□□ 0.83
NME3-207ENST00000564628 DHTKD1Q96HY7 919 aaPredicted RBP20.23■□□□□ 0.83
NME3-207ENST00000564628 HPDLQ96IR7 371 aa20.23■□□□□ 0.83
NME3-207ENST00000564628 TMEM209Q96SK2 561 aa20.23■□□□□ 0.83
NME3-207ENST00000564628 ZCWPW1Q9H0M4 648 aa20.23■□□□□ 0.83
NME3-207ENST00000564628 THG1LQ9NWX6 298 aaKnown RBP20.23■□□□□ 0.83
NME3-207ENST00000564628 KIAA1468Q9P260 1216 aa20.23■□□□□ 0.83
NME3-207ENST00000564628 PPP1R3GB7ZBB8 358 aa20.22■□□□□ 0.83
NME3-207ENST00000564628 IKBKBO14920 756 aa20.22■□□□□ 0.83
NME3-207ENST00000564628 SOAT2O75908 522 aa20.22■□□□□ 0.83
NME3-207ENST00000564628 PRAMEF12O95522 483 aa20.22■□□□□ 0.83
NME3-207ENST00000564628 STAU1O95793 577 aaKnown RBP20.22■□□□□ 0.83
NME3-207ENST00000564628 C4BPAP04003 597 aaKnown RBP20.22■□□□□ 0.83
NME3-207ENST00000564628 PSMC2P35998 433 aaKnown RBP20.22■□□□□ 0.83
NME3-207ENST00000564628 SMARCB1Q12824 385 aa20.22■□□□□ 0.83
NME3-207ENST00000564628 MYO1EQ12965 1108 aa20.22■□□□□ 0.83
NME3-207ENST00000564628 PPM1JQ5JR12 505 aa20.22■□□□□ 0.83
NME3-207ENST00000564628 TDRD10Q5VZ19 366 aaKnown RBP20.22■□□□□ 0.83
NME3-207ENST00000564628 HEATR6Q6AI08 1181 aaKnown RBP20.22■□□□□ 0.83
NME3-207ENST00000564628 ISM2Q6H9L7 571 aa20.22■□□□□ 0.83
NME3-207ENST00000564628 FOXR2Q6PJQ5 311 aa20.22■□□□□ 0.83
NME3-207ENST00000564628 INTS8Q75QN2 995 aaKnown RBP20.22■□□□□ 0.83
NME3-207ENST00000564628 FAM186BQ8IYM0 893 aa20.22■□□□□ 0.83
NME3-207ENST00000564628 PDCL2Q8N4E4 241 aa20.22■□□□□ 0.83
NME3-207ENST00000564628 FAM160A2Q8N612 972 aaPredicted RBP20.22■□□□□ 0.83
NME3-207ENST00000564628 TOP6BLQ8N6T0 577 aa20.22■□□□□ 0.83
NME3-207ENST00000564628 TRIML1Q8N9V2 468 aa20.22■□□□□ 0.83
NME3-207ENST00000564628 TTC8Q8TAM2 541 aa20.22■□□□□ 0.83
NME3-207ENST00000564628 SEPT5Q99719 369 aaPredicted RBP20.22■□□□□ 0.83
NME3-207ENST00000564628 LPIN3Q9BQK8 851 aa20.22■□□□□ 0.83
NME3-207ENST00000564628 XYLT2Q9H1B5 865 aa20.22■□□□□ 0.83
NME3-207ENST00000564628 CLSTN2Q9H4D0 955 aa20.22■□□□□ 0.83
NME3-207ENST00000564628 IL21Q9HBE4 155 aa20.22■□□□□ 0.83
NME3-207ENST00000564628 C2orf42Q9NWW7 574 aa20.22■□□□□ 0.83
NME3-207ENST00000564628 L1RE1Q9UN81 338 aa20.22■□□□□ 0.83
NME3-207ENST00000564628 PSMA7O14818 248 aa20.21■□□□□ 0.83
NME3-207ENST00000564628 MBD3O95983 291 aa20.21■□□□□ 0.83
NME3-207ENST00000564628 CST3P01034 146 aaPredicted RBP20.21■□□□□ 0.83
NME3-207ENST00000564628 ATF6P18850 670 aa20.21■□□□□ 0.83
NME3-207ENST00000564628 STIM1Q13586 685 aa20.21■□□□□ 0.83
NME3-207ENST00000564628 CAMK4Q16566 473 aa20.21■□□□□ 0.83
NME3-207ENST00000564628 ITPRIPL2Q3MIP1 535 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms