RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 ITIH6Q6UXX5 1313 aa3□□□□□ -1.93
CHD9-209ENST00000564255 FER1L4A9Z1Z3 1794 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 ITGB1P05556 798 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 POLBP06746 335 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 MST1P26927 711 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 GCLCP48506 637 aaPredicted RBP2.99□□□□□ -1.93
CHD9-209ENST00000564255 TLE2Q04725 743 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 G3BP1Q13283 466 aaKnown RBP eCLIP2.99□□□□□ -1.93
CHD9-209ENST00000564255 GRM7Q14831 915 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 TIGD6Q17RP2 521 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 MGAT5BQ3V5L5 792 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 MANEALQ5VSG8 457 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 AGAP9Q5VTM2 703 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 KLHL17Q6TDP4 642 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 ARHGEF18Q6ZSZ5 1173 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 BBS12Q6ZW61 710 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 SIAH1Q8IUQ4 282 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 Q8NA96 180 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 SCAMP5Q8TAC9 235 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 BPIFB1Q8TDL5 484 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 RILPL2Q969X0 211 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 NEU1Q99519 415 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 TRIM5Q9C035 493 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 SPON1Q9HCB6 807 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.99□□□□□ -1.93
CHD9-209ENST00000564255 NEU2Q9Y3R4 380 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.99□□□□□ -1.93
CHD9-209ENST00000564255 RAD54BQ9Y620 910 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 CCDC195A0A1B0GUA6 201 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 CCDC78A2IDD5 438 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 FCHO1O14526 889 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 CDC14BO60729 498 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 MFAP3LO75121 409 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 COQ9O75208 318 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 PIAS2O75928 621 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 ACTL6BO94805 426 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 PRKCBP05771 671 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 GNAT2P19087 354 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 ZNF134P52741 427 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 LINC00310P59036 64 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 SURF1Q15526 300 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 KCTD20Q7Z5Y7 419 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 ANKS1BQ7Z6G8 1248 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 FAM124AQ86V42 546 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 MARS2Q96GW9 593 aaKnown RBP2.99□□□□□ -1.93
CHD9-209ENST00000564255 MAELQ96JY0 434 aaKnown RBP2.99□□□□□ -1.93
CHD9-209ENST00000564255 SEC62Q99442 399 aaKnown RBP2.99□□□□□ -1.93
CHD9-209ENST00000564255 PYM1Q9BRP8 204 aaKnown RBP2.99□□□□□ -1.93
CHD9-209ENST00000564255 TTYH3Q9C0H2 523 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 TMOD4Q9NZQ9 345 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 IFT80Q9P2H3 777 aaPredicted RBP2.99□□□□□ -1.93
CHD9-209ENST00000564255 HPSEQ9Y251 543 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 SPATA31A3Q5VYP0 1347 aa2.99□□□□□ -1.93
CHD9-209ENST00000564255 CD3EAPO15446 510 aaKnown RBP2.98□□□□□ -1.93
CHD9-209ENST00000564255 DNPH1O43598 174 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 VPS4BO75351 444 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 RAD17O75943 681 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 IPO13O94829 963 aaKnown RBP2.98□□□□□ -1.93
CHD9-209ENST00000564255 CD4P01730 458 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 TK1P04183 234 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 PAPOLAP51003 745 aaKnown RBP2.98□□□□□ -1.93
CHD9-209ENST00000564255 ALDH18A1P54886 795 aaKnown RBP2.98□□□□□ -1.93
CHD9-209ENST00000564255 LILRA4P59901 499 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 VAMP2P63027 116 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 MYO1EQ12965 1108 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 KCNAB1Q14722 419 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 C1QL3Q5VWW1 255 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 TAX1BP1Q86VP1 789 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 CCDC117Q8IWD4 279 aaPredicted RBP2.98□□□□□ -1.93
CHD9-209ENST00000564255 LGI4Q8N135 537 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 OR6Y1Q8NGX8 325 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 ZNF483Q8TF39 744 aaPredicted RBP2.98□□□□□ -1.93
CHD9-209ENST00000564255 LMF1Q96S06 567 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 TMEM160Q9NX00 188 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 PLA2G3Q9NZ20 509 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 CDYLQ9Y232 598 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 FAM90A18PA6NE21 464 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 FAM90A16PA6NEW6 464 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 A6NLC8 198 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 FAM90A9PA6NNJ1 464 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 FAM90A5PA8MXJ8 464 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 HOXC11O43248 304 aaPredicted RBP2.98□□□□□ -1.93
CHD9-209ENST00000564255 SUN1O94901 812 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 TSPAN15O95858 294 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 FAM90A15PP0C7V4 464 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 FAM90A14PP0C7W9 464 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 ARP10275 920 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 KCNA2P16389 499 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 CNTFP26441 200 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 LIFRP42702 1097 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 PRKAA2P54646 552 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 ACTR2P61160 394 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 ZNF844Q08AG5 666 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 SCAPQ12770 1279 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 ELAVL1Q15717 326 aaKnown RBP2.98□□□□□ -1.93
CHD9-209ENST00000564255 VMACQ2NL98 169 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 TTC22Q5TAA0 569 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 SLFN13Q68D06 897 aa2.98□□□□□ -1.93
CHD9-209ENST00000564255 SLC30A10Q6XR72 485 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms