RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 SCFD1Q8WVM8 642 aa25.55■■□□□ 1.68
NME3-206ENST00000564252 FOXD4L4Q8WXT5 416 aaPredicted RBP25.55■■□□□ 1.68
NME3-206ENST00000564252 SNX21Q969T3 373 aa25.55■■□□□ 1.68
NME3-206ENST00000564252 CYP2S1Q96SQ9 504 aa25.55■■□□□ 1.68
NME3-206ENST00000564252 MAGEC2Q9UBF1 373 aaPredicted RBP25.55■■□□□ 1.68
NME3-206ENST00000564252 UBE4BO95155 1302 aa25.55■■□□□ 1.68
NME3-206ENST00000564252 PTPRDP23468 1912 aa25.55■■□□□ 1.68
NME3-206ENST00000564252 SDHBP21912 280 aa25.54■■□□□ 1.68
NME3-206ENST00000564252 GRSF1Q12849 480 aaKnown RBP eCLIP25.54■■□□□ 1.68
NME3-206ENST00000564252 USP4Q13107 963 aa25.54■■□□□ 1.68
NME3-206ENST00000564252 MTF1Q14872 753 aa25.54■■□□□ 1.68
NME3-206ENST00000564252 VSTM1Q6UX27 236 aa25.54■■□□□ 1.68
NME3-206ENST00000564252 UNC13DQ70J99 1090 aa25.54■■□□□ 1.68
NME3-206ENST00000564252 MAGEF1Q9HAY2 307 aa25.54■■□□□ 1.68
NME3-206ENST00000564252 GCNT4Q9P109 453 aa25.54■■□□□ 1.68
NME3-206ENST00000564252 TRAV19A0A0A6YYK7 116 aa25.53■■□□□ 1.68
NME3-206ENST00000564252 CLIC2O15247 247 aa25.53■■□□□ 1.68
NME3-206ENST00000564252 POLR2DO15514 142 aaKnown RBP25.53■■□□□ 1.68
NME3-206ENST00000564252 CST3P01034 146 aaPredicted RBP25.53■■□□□ 1.68
NME3-206ENST00000564252 CKMP06732 381 aa25.53■■□□□ 1.68
NME3-206ENST00000564252 USP17L7P0C7H9 530 aa25.53■■□□□ 1.68
NME3-206ENST00000564252 DLATP10515 647 aaKnown RBP25.53■■□□□ 1.68
NME3-206ENST00000564252 CASP1P29466 404 aa25.53■■□□□ 1.68
NME3-206ENST00000564252 CYP24A1Q07973 514 aa25.53■■□□□ 1.68
NME3-206ENST00000564252 PSMD6Q15008 389 aa25.53■■□□□ 1.68
NME3-206ENST00000564252 WDR5BQ86VZ2 330 aa25.53■■□□□ 1.68
NME3-206ENST00000564252 NELFCDQ8IXH7 590 aa25.53■■□□□ 1.68
NME3-206ENST00000564252 SPATA17Q96L03 361 aa25.53■■□□□ 1.68
NME3-206ENST00000564252 MMS19Q96T76 1030 aa25.53■■□□□ 1.68
NME3-206ENST00000564252 CGRRF1Q99675 332 aa25.53■■□□□ 1.68
NME3-206ENST00000564252 FBRSL1Q9HCM7 1045 aaKnown RBP25.53■■□□□ 1.68
NME3-206ENST00000564252 NME7Q9Y5B8 376 aa25.53■■□□□ 1.68
NME3-206ENST00000564252 C2orf78A6NCI8 922 aa25.52■■□□□ 1.68
NME3-206ENST00000564252 LRP3O75074 770 aa25.52■■□□□ 1.68
NME3-206ENST00000564252 EGFP01133 1207 aa25.52■■□□□ 1.68
NME3-206ENST00000564252 PDGFRBP09619 1106 aa25.52■■□□□ 1.68
NME3-206ENST00000564252 TNNI1P19237 187 aa25.52■■□□□ 1.68
NME3-206ENST00000564252 BDNFP23560 247 aa25.52■■□□□ 1.68
NME3-206ENST00000564252 CYP2J2P51589 502 aa25.52■■□□□ 1.68
NME3-206ENST00000564252 ATXN1P54253 815 aaKnown RBP25.52■■□□□ 1.68
NME3-206ENST00000564252 SNRPFP62306 86 aaKnown RBP25.52■■□□□ 1.68
NME3-206ENST00000564252 MAPRE1Q15691 268 aaKnown RBP25.52■■□□□ 1.68
NME3-206ENST00000564252 NAIF1Q69YI7 327 aaPredicted RBP25.52■■□□□ 1.68
NME3-206ENST00000564252 ARL14EPQ8N8R7 260 aaPredicted RBP25.52■■□□□ 1.68
NME3-206ENST00000564252 FSIP1Q8NA03 581 aa25.52■■□□□ 1.68
NME3-206ENST00000564252 XXYLT1Q8NBI6 393 aa25.52■■□□□ 1.68
NME3-206ENST00000564252 OSCP1Q8WVF1 389 aa25.52■■□□□ 1.68
NME3-206ENST00000564252 MRPL45Q9BRJ2 306 aaKnown RBP25.52■■□□□ 1.68
NME3-206ENST00000564252 GZF1Q9H116 711 aaPredicted RBP25.52■■□□□ 1.68
NME3-206ENST00000564252 BLZF1Q9H2G9 400 aa25.52■■□□□ 1.68
NME3-206ENST00000564252 ZSCAN22P10073 491 aaPredicted RBP25.51■■□□□ 1.67
NME3-206ENST00000564252 GJA4P35212 333 aa25.51■■□□□ 1.67
NME3-206ENST00000564252 AMPD2Q01433 879 aa25.51■■□□□ 1.67
NME3-206ENST00000564252 BMT2Q1RMZ1 405 aa25.51■■□□□ 1.67
NME3-206ENST00000564252 FOXD4L6Q3SYB3 417 aaPredicted RBP25.51■■□□□ 1.67
NME3-206ENST00000564252 FOXD4L3Q6VB84 417 aaPredicted RBP25.51■■□□□ 1.67
NME3-206ENST00000564252 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.51■■□□□ 1.67
NME3-206ENST00000564252 CPA6Q8N4T0 437 aa25.51■■□□□ 1.67
NME3-206ENST00000564252 MYCBPAPQ8TBZ2 947 aa25.51■■□□□ 1.67
NME3-206ENST00000564252 PCED1BQ96HM7 432 aa25.51■■□□□ 1.67
NME3-206ENST00000564252 CEP295NLQ96MC4 621 aa25.51■■□□□ 1.67
NME3-206ENST00000564252 FNBP1Q96RU3 617 aa25.51■■□□□ 1.67
NME3-206ENST00000564252 ECT2Q9H8V3 914 aa25.51■■□□□ 1.67
NME3-206ENST00000564252 DUS2Q9NX74 493 aaKnown RBP25.51■■□□□ 1.67
NME3-206ENST00000564252 CDV3Q9UKY7 258 aaKnown RBP25.51■■□□□ 1.67
NME3-206ENST00000564252 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.51■■□□□ 1.67
NME3-206ENST00000564252 HELZP42694 1942 aaKnown RBP25.51■■□□□ 1.67
NME3-206ENST00000564252 TACC1O75410 805 aa25.5■■□□□ 1.67
NME3-206ENST00000564252 F13A1P00488 732 aa25.5■■□□□ 1.67
NME3-206ENST00000564252 GRIK1P39086 918 aa25.5■■□□□ 1.67
NME3-206ENST00000564252 GALK1P51570 392 aa25.5■■□□□ 1.67
NME3-206ENST00000564252 USP46P62068 366 aa25.5■■□□□ 1.67
NME3-206ENST00000564252 CYP27A1Q02318 531 aa25.5■■□□□ 1.67
NME3-206ENST00000564252 HS2ST1Q7LGA3 356 aa25.5■■□□□ 1.67
NME3-206ENST00000564252 ZNF516Q92618 1163 aa25.5■■□□□ 1.67
NME3-206ENST00000564252 CCDC127Q96BQ5 260 aa25.5■■□□□ 1.67
NME3-206ENST00000564252 PCDHA7Q9UN72 937 aa25.5■■□□□ 1.67
NME3-206ENST00000564252 WNT6Q9Y6F9 365 aa25.5■■□□□ 1.67
NME3-206ENST00000564252 ATG2BQ96BY7 2078 aa25.49■■□□□ 1.67
NME3-206ENST00000564252 ATG13O75143 517 aa25.49■■□□□ 1.67
NME3-206ENST00000564252 RNF40O75150 1001 aa25.49■■□□□ 1.67
NME3-206ENST00000564252 TCF3P15923 654 aa25.49■■□□□ 1.67
NME3-206ENST00000564252 DRD1P21728 446 aa25.49■■□□□ 1.67
NME3-206ENST00000564252 GNL1P36915 607 aaPredicted RBP25.49■■□□□ 1.67
NME3-206ENST00000564252 CUL4BQ13620 913 aa25.49■■□□□ 1.67
NME3-206ENST00000564252 KCNB1Q14721 858 aa25.49■■□□□ 1.67
NME3-206ENST00000564252 EML3Q32P44 896 aa25.49■■□□□ 1.67
NME3-206ENST00000564252 MDH1BQ5I0G3 518 aa25.49■■□□□ 1.67
NME3-206ENST00000564252 RESP18Q5W5W9 173 aa25.49■■□□□ 1.67
NME3-206ENST00000564252 DENND5BQ6ZUT9 1274 aa25.49■■□□□ 1.67
NME3-206ENST00000564252 CEP68Q76N32 757 aa25.49■■□□□ 1.67
NME3-206ENST00000564252 C12orf56Q8IXR9 622 aa25.49■■□□□ 1.67
NME3-206ENST00000564252 FAM160A2Q8N612 972 aaPredicted RBP25.49■■□□□ 1.67
NME3-206ENST00000564252 TTC16Q8NEE8 873 aa25.49■■□□□ 1.67
NME3-206ENST00000564252 SH3RF2Q8TEC5 729 aa25.49■■□□□ 1.67
NME3-206ENST00000564252 ATP2A3Q93084 1043 aa25.49■■□□□ 1.67
NME3-206ENST00000564252 P2RY13Q9BPV8 354 aa25.49■■□□□ 1.67
NME3-206ENST00000564252 TTLL2Q9BWV7 592 aa25.49■■□□□ 1.67
NME3-206ENST00000564252 SNX25Q9H3E2 840 aa25.49■■□□□ 1.67
NME3-206ENST00000564252 SLC39A2Q9NP94 309 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms