RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 CYP27A1Q02318 531 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 EHHADHQ08426 723 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 CUL4BQ13620 913 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 ALCAMQ13740 583 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 MTF1Q14872 753 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 SF3A2Q15428 464 aaKnown RBP7.39□□□□□ -1.23
CDH11-208ENST00000563492 ZNF77Q15935 545 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 SNRNP35Q16560 246 aaKnown RBP7.39□□□□□ -1.23
CDH11-208ENST00000563492 CFAP221Q4G0U5 840 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 MDH1BQ5I0G3 518 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 FAM26FQ5R3K3 315 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 LAIR1Q6GTX8 287 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 KBTBD6Q86V97 674 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 TMEM86AQ8N2M4 240 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 SH3RF2Q8TEC5 729 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 LEO1Q8WVC0 666 aaPredicted RBP7.39□□□□□ -1.23
CDH11-208ENST00000563492 TRMT2BQ96GJ1 504 aaKnown RBP7.39□□□□□ -1.23
CDH11-208ENST00000563492 MSANTD3Q96H12 275 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 PCED1BQ96HM7 432 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 ANKRD36BP1Q96IX9 119 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 HHIPQ96QV1 700 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 MMS19Q96T76 1030 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 C7orf25Q9BPX7 421 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 IER2Q9BTL4 223 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 ZNF518BQ9C0D4 1074 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 RNF38Q9H0F5 515 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 TNMDQ9H2S6 317 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 ECT2Q9H8V3 914 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 ABCB6Q9NP58 842 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 SLC39A2Q9NP94 309 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 SEMA4GQ9NTN9 838 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 DUS2Q9NX74 493 aaKnown RBP7.39□□□□□ -1.23
CDH11-208ENST00000563492 SMPD4Q9NXE4 827 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 MAGEC2Q9UBF1 373 aaPredicted RBP7.39□□□□□ -1.23
CDH11-208ENST00000563492 GMEB2Q9UKD1 530 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 RAB23Q9ULC3 237 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 PCDHA7Q9UN72 937 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 INVSQ9Y283 1065 aa7.39□□□□□ -1.23
CDH11-208ENST00000563492 PATJQ8NI35 1801 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 TPRP12270 2363 aaKnown RBP7.38□□□□□ -1.23
CDH11-208ENST00000563492 TRAV19A0A0A6YYK7 116 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 F8VP50 259 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 CUTAO60888 179 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 CKMP06732 381 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 USP17L7P0C7H9 530 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 TNNI1P19237 187 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 WARSP23381 471 aaKnown RBP7.38□□□□□ -1.23
CDH11-208ENST00000563492 PCSK1P29120 753 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 GNL1P36915 607 aaPredicted RBP7.38□□□□□ -1.23
CDH11-208ENST00000563492 GRIK1P39086 918 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 MAGEA11P43364 429 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 RAP1GAPP47736 663 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 PGFP49763 221 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 LMNB2Q03252 620 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 FAM160A1Q05DH4 1040 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 CYP24A1Q07973 514 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 GRSF1Q12849 480 aaKnown RBP eCLIP7.38□□□□□ -1.23
CDH11-208ENST00000563492 MYO1EQ12965 1108 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 ORC1Q13415 861 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 PPP2R5DQ14738 602 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 PSMD6Q15008 389 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 PDGFRLQ15198 375 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 GAB4Q2WGN9 574 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 EML3Q32P44 896 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 WDR72Q3MJ13 1102 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 CC2D1AQ6P1N0 951 aaPredicted RBP7.38□□□□□ -1.23
CDH11-208ENST00000563492 CEP68Q76N32 757 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 HS2ST1Q7LGA3 356 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.38□□□□□ -1.23
CDH11-208ENST00000563492 WDR5BQ86VZ2 330 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 WDR49Q8IV35 697 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 IQUBQ8NA54 791 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 OR6B3Q8NGW1 331 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 MYCBPAPQ8TBZ2 947 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 OSCP1Q8WVF1 389 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 SECISBP2LQ93073 1101 aaKnown RBP7.38□□□□□ -1.23
CDH11-208ENST00000563492 WBP2Q969T9 261 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 ZNF396Q96N95 335 aaPredicted RBP7.38□□□□□ -1.23
CDH11-208ENST00000563492 CNTNAP3BQ96NU0 1288 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 KCNK16Q96T55 309 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 P2RY13Q9BPV8 354 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 B3GNT5Q9BYG0 378 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 CNTNAP3Q9BZ76 1288 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 SDCBP2Q9H190 292 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 XYLT2Q9H1B5 865 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 ARRDC1-AS1Q9H2J1 176 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 ZDHHC4Q9NPG8 344 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.38□□□□□ -1.23
CDH11-208ENST00000563492 NXF1Q9UBU9 619 aaKnown RBP7.38□□□□□ -1.23
CDH11-208ENST00000563492 SERTAD1Q9UHV2 236 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 CDV3Q9UKY7 258 aaKnown RBP7.38□□□□□ -1.23
CDH11-208ENST00000563492 CDH9Q9ULB4 789 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 ANK1P16157 1881 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 TSC2P49815 1807 aa7.38□□□□□ -1.23
CDH11-208ENST00000563492 ZNF840PA6NDX5 716 aa7.37□□□□□ -1.23
CDH11-208ENST00000563492 PRR5-ARHGAP8B1AHC4 643 aa7.37□□□□□ -1.23
CDH11-208ENST00000563492 LEFTY2O00292 366 aa7.37□□□□□ -1.23
CDH11-208ENST00000563492 EIF3DO15371 548 aaKnown RBP eCLIP7.37□□□□□ -1.23
CDH11-208ENST00000563492 KLRC4O43908 158 aa7.37□□□□□ -1.23
CDH11-208ENST00000563492 VNN1O95497 513 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms