RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 OSBPL8Q9BZF1 889 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 ACBD3Q9H3P7 528 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 MIOSQ9NXC5 875 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 CWC15Q9P013 229 aaKnown RBP9.91□□□□□ -0.82
LINC00838-201ENST00000562956 THSD7BQ9C0I4 1608 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 GOLGA6BA6NDN3 693 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 ARL5CA6NH57 179 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 LRCH4O75427 683 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 CCDC130P13994 396 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 FNTAP49354 379 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 STILQ15468 1287 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 ZFYVE27Q5T4F4 411 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 AGMOQ6ZNB7 445 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 FAM183BPQ6ZVS7 135 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 PACS2Q86VP3 889 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 FNIP1Q8TF40 1166 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.91□□□□□ -0.82
LINC00838-201ENST00000562956 RAPGEF5Q92565 580 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 SLITRK1Q96PX8 696 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 FAM118BQ9BPY3 351 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 FAM114A2Q9NRY5 505 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 SNX24Q9Y343 169 aa9.91□□□□□ -0.82
LINC00838-201ENST00000562956 GABBR2O75899 941 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 KRT1P04264 644 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 KRT10P13645 584 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 IL1R2P27930 398 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 APLP1P51693 650 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 SLC25A11Q02978 314 aaKnown RBP9.9□□□□□ -0.82
LINC00838-201ENST00000562956 LPIN1Q14693 890 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 TRIM71Q2Q1W2 868 aaKnown RBP9.9□□□□□ -0.82
LINC00838-201ENST00000562956 ICE2Q659A1 982 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 TRNP1Q6NT89 227 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 MFSD7Q6UXD7 560 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 RCOR2Q8IZ40 523 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 ADGRF2Q8IZF7 708 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 CRYBG2Q8N1P7 616 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 SLC35F5Q8WV83 523 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 DCLK3Q9C098 648 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 SNX25Q9H3E2 840 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 RASAL2Q9UJF2 1139 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 NOD1Q9Y239 953 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 CASP8AP2Q9UKL3 1982 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 HUS1O60921 280 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 GRAP2O75791 330 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 RPLP2P05387 115 aaKnown RBP9.9□□□□□ -0.82
LINC00838-201ENST00000562956 IBSPP21815 317 aaPredicted RBP9.9□□□□□ -0.82
LINC00838-201ENST00000562956 ADORA2BP29275 332 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 RPL21P46778 160 aaKnown RBP9.9□□□□□ -0.82
LINC00838-201ENST00000562956 PTK7Q13308 1070 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 TAF5Q15542 800 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 CCDC142Q17RM4 750 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 SMTNL2Q2TAL5 461 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 KAZNQ674X7 775 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 ARHGAP17Q68EM7 881 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 OR6B2Q6IFH4 312 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 EP400NLQ6ZTU2 488 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 OSTM1Q86WC4 334 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 MREGQ8N565 214 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 PXYLP1Q8TE99 480 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 MAIP1Q8WWC4 291 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 PIK3R5Q8WYR1 880 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 TSPYL2Q9H2G4 693 aaPredicted RBP9.9□□□□□ -0.82
LINC00838-201ENST00000562956 ZWILCHQ9H900 591 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 GRHL1Q9NZI5 618 aa9.9□□□□□ -0.82
LINC00838-201ENST00000562956 PODXLO00592 558 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 ECEL1O95672 775 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 THP07101 528 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 HSPA9P38646 679 aaKnown RBP9.89□□□□□ -0.83
LINC00838-201ENST00000562956 VEGFBP49765 207 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 SCNN1GP51170 649 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 CLCNKBP51801 687 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 CDR1P51861 262 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 RAB6CQ53S08 254 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 HSP90B2PQ58FF3 399 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 KCNT1Q5JUK3 1230 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 SH3PXD2AQ5TCZ1 1133 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 LHX8Q68G74 356 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 OLFML1Q6UWY5 402 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 LEKR1Q6ZMV7 388 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 MRPL10Q7Z7H8 261 aaKnown RBP9.89□□□□□ -0.83
LINC00838-201ENST00000562956 SCUBE3Q8IX30 993 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 RNF169Q8NCN4 708 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 RBM41Q96IZ5 413 aaKnown RBP9.89□□□□□ -0.83
LINC00838-201ENST00000562956 SLC4A5Q9BY07 1137 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 RAB6CQ9H0N0 254 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 MED4Q9NPJ6 270 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 ZDHHC18Q9NUE0 388 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 SLC38A7Q9NVC3 462 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 HESX1Q9UBX0 185 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 LRRD1A4D1F6 860 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 C3orf70A6NLC5 250 aaPredicted RBP9.89□□□□□ -0.83
LINC00838-201ENST00000562956 CYB561D2O14569 222 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 ATP2C2O75185 946 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 CABYRO75952 493 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 INHAP05111 366 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 DRG2P55039 364 aaKnown RBP9.89□□□□□ -0.83
LINC00838-201ENST00000562956 HTRA3P83110 453 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 DSC3Q14574 896 aa9.89□□□□□ -0.83
LINC00838-201ENST00000562956 TTC31Q49AM3 519 aaPredicted RBP9.89□□□□□ -0.83
LINC00838-201ENST00000562956 WSCD1Q658N2 575 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms