RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 RBBP8NLQ8NC74 664 aaPredicted RBP17.36■□□□□ 0.37
USB1-206ENST00000562534 PSMG2Q969U7 264 aa17.36■□□□□ 0.37
USB1-206ENST00000562534 ASB2Q96Q27 587 aa17.36■□□□□ 0.37
USB1-206ENST00000562534 ZNF518BQ9C0D4 1074 aa17.36■□□□□ 0.37
USB1-206ENST00000562534 WDR6Q9NNW5 1121 aaKnown RBP17.36■□□□□ 0.37
USB1-206ENST00000562534 FAM49BQ9NUQ9 324 aa17.36■□□□□ 0.37
USB1-206ENST00000562534 EHD2Q9NZN4 543 aa17.36■□□□□ 0.37
USB1-206ENST00000562534 ZNF197O14709 1029 aa17.35■□□□□ 0.37
USB1-206ENST00000562534 CBFA2T2O43439 604 aa17.35■□□□□ 0.37
USB1-206ENST00000562534 SOAT2O75908 522 aa17.35■□□□□ 0.37
USB1-206ENST00000562534 NOL4O94818 638 aa17.35■□□□□ 0.37
USB1-206ENST00000562534 FGF19O95750 216 aa17.35■□□□□ 0.37
USB1-206ENST00000562534 CCDC130P13994 396 aa17.35■□□□□ 0.37
USB1-206ENST00000562534 CD19P15391 556 aa17.35■□□□□ 0.37
USB1-206ENST00000562534 KLK7P49862 253 aa17.35■□□□□ 0.37
USB1-206ENST00000562534 ZNF132P52740 706 aa17.35■□□□□ 0.37
USB1-206ENST00000562534 SLC8A3P57103 927 aa17.35■□□□□ 0.37
USB1-206ENST00000562534 POLR2FP61218 127 aaKnown RBP17.35■□□□□ 0.37
USB1-206ENST00000562534 PTK2Q05397 1052 aa17.35■□□□□ 0.37
USB1-206ENST00000562534 RAPGEF1Q13905 1077 aa17.35■□□□□ 0.37
USB1-206ENST00000562534 SMAD2Q15796 467 aaKnown RBP17.35■□□□□ 0.37
USB1-206ENST00000562534 CNGA2Q16280 664 aa17.35■□□□□ 0.37
USB1-206ENST00000562534 GRASPQ7Z6J2 395 aaPredicted RBP17.35■□□□□ 0.37
USB1-206ENST00000562534 FAM35AQ86V20 835 aa17.35■□□□□ 0.37
USB1-206ENST00000562534 ANKRD52Q8NB46 1076 aa17.35■□□□□ 0.37
USB1-206ENST00000562534 DUSP16Q9BY84 665 aa17.35■□□□□ 0.37
USB1-206ENST00000562534 UBXN6Q9BZV1 441 aa17.35■□□□□ 0.37
USB1-206ENST00000562534 CSNK1G1Q9HCP0 422 aa17.35■□□□□ 0.37
USB1-206ENST00000562534 AVENQ9NQS1 362 aaPredicted RBP17.35■□□□□ 0.37
USB1-206ENST00000562534 IFNKQ9P0W0 207 aa17.35■□□□□ 0.37
USB1-206ENST00000562534 DNMT3BQ9UBC3 853 aaKnown RBP17.35■□□□□ 0.37
USB1-206ENST00000562534 FHOD1Q9Y613 1164 aa17.35■□□□□ 0.37
USB1-206ENST00000562534 MED7O43513 233 aa17.34■□□□□ 0.37
USB1-206ENST00000562534 AP1G2O75843 785 aa17.34■□□□□ 0.37
USB1-206ENST00000562534 FAM200BP0CF97 657 aa17.34■□□□□ 0.37
USB1-206ENST00000562534 ATF6P18850 670 aa17.34■□□□□ 0.37
USB1-206ENST00000562534 ADORA2BP29275 332 aa17.34■□□□□ 0.37
USB1-206ENST00000562534 FAM71AQ8IYT1 594 aa17.34■□□□□ 0.37
USB1-206ENST00000562534 GIPC2Q8TF65 315 aa17.34■□□□□ 0.37
USB1-206ENST00000562534 CORO1BQ9BR76 489 aa17.34■□□□□ 0.37
USB1-206ENST00000562534 NUP58Q9BVL2 599 aa17.34■□□□□ 0.37
USB1-206ENST00000562534 RBSNQ9H1K0 784 aa17.34■□□□□ 0.37
USB1-206ENST00000562534 GANQ9H2C0 597 aa17.34■□□□□ 0.37
USB1-206ENST00000562534 DMAP1Q9NPF5 467 aaPredicted RBP17.34■□□□□ 0.37
USB1-206ENST00000562534 HESX1Q9UBX0 185 aa17.34■□□□□ 0.37
USB1-206ENST00000562534 F8VP50 259 aa17.33■□□□□ 0.36
USB1-206ENST00000562534 MICAL2O94851 1124 aa17.33■□□□□ 0.36
USB1-206ENST00000562534 RHOP08100 348 aa17.33■□□□□ 0.36
USB1-206ENST00000562534 PABPC1LQ4VXU2 614 aaKnown RBP17.33■□□□□ 0.36
USB1-206ENST00000562534 LCLAT1Q6UWP7 414 aa17.33■□□□□ 0.36
USB1-206ENST00000562534 DENND5BQ6ZUT9 1274 aa17.33■□□□□ 0.36
USB1-206ENST00000562534 CACNA2D4Q7Z3S7 1137 aa17.33■□□□□ 0.36
USB1-206ENST00000562534 GAS2L3Q86XJ1 694 aa17.33■□□□□ 0.36
USB1-206ENST00000562534 NUP93Q8N1F7 819 aa17.33■□□□□ 0.36
USB1-206ENST00000562534 ZNF606Q8WXB4 792 aa17.33■□□□□ 0.36
USB1-206ENST00000562534 SPAG5Q96R06 1193 aa17.33■□□□□ 0.36
USB1-206ENST00000562534 KCNK16Q96T55 309 aa17.33■□□□□ 0.36
USB1-206ENST00000562534 PHF7Q9BWX1 381 aaPredicted RBP17.33■□□□□ 0.36
USB1-206ENST00000562534 EDEM3Q9BZQ6 932 aa17.33■□□□□ 0.36
USB1-206ENST00000562534 NLRC4Q9NPP4 1024 aa17.33■□□□□ 0.36
USB1-206ENST00000562534 ASAH2Q9NR71 780 aa17.33■□□□□ 0.36
USB1-206ENST00000562534 KRT82Q9NSB4 513 aa17.33■□□□□ 0.36
USB1-206ENST00000562534 COMMD8Q9NX08 183 aa17.33■□□□□ 0.36
USB1-206ENST00000562534 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.33■□□□□ 0.36
USB1-206ENST00000562534 UXTQ9UBK9 157 aaPredicted RBP17.33■□□□□ 0.36
USB1-206ENST00000562534 SLC38A8A6NNN8 435 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 CYP26A1O43174 497 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 BMP1P13497 986 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 NPR3P17342 541 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 FSHRP23945 695 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 CLCN1P35523 988 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 STAT1P42224 750 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 GPR15P49685 360 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 EPHA5P54756 1037 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 MAP3K7CLP57077 242 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 PDZD4Q76G19 769 aaPredicted RBP17.32■□□□□ 0.36
USB1-206ENST00000562534 FMNL3Q8IVF7 1028 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.32■□□□□ 0.36
USB1-206ENST00000562534 GPR152Q8TDT2 470 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 TFAP2BQ92481 460 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 IQCDQ96DY2 449 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 TRMT2BQ96GJ1 504 aaKnown RBP17.32■□□□□ 0.36
USB1-206ENST00000562534 MYRFLQ96LU7 910 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 SMOQ99835 787 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 LRRC3Q9BY71 257 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 XPO4Q9C0E2 1151 aaKnown RBP17.32■□□□□ 0.36
USB1-206ENST00000562534 GPR88Q9GZN0 384 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 POMKQ9H5K3 350 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 PNPLA8Q9NP80 782 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 HCFC1R1Q9NWW0 138 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 PRKAG3Q9UGI9 489 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 AJAP1Q9UKB5 411 aaPredicted RBP17.32■□□□□ 0.36
USB1-206ENST00000562534 TSPAN16Q9UKR8 245 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 USTQ9Y2C2 406 aa17.32■□□□□ 0.36
USB1-206ENST00000562534 F8VZ95 297 aa17.31■□□□□ 0.36
USB1-206ENST00000562534 O00370 1275 aa17.31■□□□□ 0.36
USB1-206ENST00000562534 EPHB6O15197 1021 aa17.31■□□□□ 0.36
USB1-206ENST00000562534 BEST1O76090 585 aa17.31■□□□□ 0.36
USB1-206ENST00000562534 RTN3O95197 1032 aaPredicted RBP17.31■□□□□ 0.36
USB1-206ENST00000562534 CCDC172P0C7W6 258 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms