RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 DUS2Q9NX74 493 aaKnown RBP17.88■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 GCNT4Q9P109 453 aa17.88■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 WNT6Q9Y6F9 365 aa17.88■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 KIAA1549LQ6ZVL6 1849 aa17.88■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 HELZP42694 1942 aaKnown RBP17.88■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 EML5Q05BV3 1969 aa17.88■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 MYO16Q9Y6X6 1858 aa17.87■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 SLC30A4O14863 429 aa17.87■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 ATG13O75143 517 aa17.87■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 RPP40O75818 363 aaKnown RBP17.87■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 TNNC2P02585 160 aa17.87■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 USP17L7P0C7H9 530 aa17.87■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 AMPD2Q01433 879 aa17.87■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 STK38Q15208 465 aa17.87■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 DUOXA2Q1HG44 320 aa17.87■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 STXBP4Q6ZWJ1 553 aa17.87■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 EPM2AIP1Q7L775 607 aaPredicted RBP17.87■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 WDR49Q8IV35 697 aa17.87■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 CPA6Q8N4T0 437 aa17.87■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 P2RY13Q9BPV8 354 aa17.87■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 CDH9Q9ULB4 789 aa17.87■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 SLC8A2Q9UPR5 921 aa17.87■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 NME7Q9Y5B8 376 aa17.87■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 PTPRDP23468 1912 aa17.87■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 CCDC163A0A0D9SF12 145 aa17.86■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 SPTLC2O15270 562 aa17.86■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 EIF3DO15371 548 aaKnown RBP eCLIP17.86■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 TGFB1I1O43294 461 aa17.86■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 DRD1P21728 446 aa17.86■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 WARSP23381 471 aaKnown RBP17.86■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 BDNFP23560 247 aa17.86■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 USP46P62068 366 aa17.86■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 ZXDBP98169 803 aa17.86■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 SURF1Q15526 300 aa17.86■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 EML3Q32P44 896 aa17.86■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 C4orf50Q6ZRC1 276 aa17.86■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 TRAPPC11Q7Z392 1133 aa17.86■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 KBTBD6Q86V97 674 aa17.86■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 SH3RF2Q8TEC5 729 aa17.86■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 DHX58Q96C10 678 aa17.86■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 SPATA17Q96L03 361 aa17.86■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 CNTNAP3BQ96NU0 1288 aa17.86■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 CNTNAP3Q9BZ76 1288 aa17.86■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 MAGEC2Q9UBF1 373 aaPredicted RBP17.86■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 R3HCC1Q9Y3T6 440 aaKnown RBP17.86■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 AXIN1O15169 862 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 PPP6R2O75170 966 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 CST3P01034 146 aaPredicted RBP17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 PDGFRBP09619 1106 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 TCF3P15923 654 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 RAP1GAPP47736 663 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 IFNAR2P48551 515 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 ASIC1P78348 528 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 CYP27A1Q02318 531 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 CCDC6Q16204 474 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 SNRNP35Q16560 246 aaKnown RBP17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 SHC4Q6S5L8 630 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 VSTM1Q6UX27 236 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 FSIP1Q8NA03 581 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 RDH13Q8NBN7 331 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 RPLP0P6Q8NHW5 317 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 ZNF507Q8TCN5 953 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 ATP2A3Q93084 1043 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 PCED1BQ96HM7 432 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 HHIPQ96QV1 700 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 MMS19Q96T76 1030 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 MRPL45Q9BRJ2 306 aaKnown RBP17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 LRRC27Q9C0I9 530 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 ARRDC1-AS1Q9H2J1 176 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 CUEDC2Q9H467 287 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 KIAA1586Q9HCI6 787 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 AGPAT3Q9NRZ7 376 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 TFIP11Q9UBB9 837 aaKnown RBP17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 ARHGAP26Q9UNA1 814 aa17.85■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 RALGAPA1Q6GYQ0 2036 aa17.84■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 K7ELQ4 463 aaPredicted RBP17.84■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 ADRB1P08588 477 aa17.84■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 DLATP10515 647 aaKnown RBP17.84■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 HDCP19113 662 aa17.84■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 GRIK1P39086 918 aa17.84■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 KCNB1Q14721 858 aa17.84■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 SF3A2Q15428 464 aaKnown RBP17.84■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 FBXO43Q4G163 708 aa17.84■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 PPM1JQ5JR12 505 aa17.84■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 FAM26FQ5R3K3 315 aa17.84■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 CNNM4Q6P4Q7 775 aa17.84■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 DENND5BQ6ZUT9 1274 aa17.84■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 CACNA2D4Q7Z3S7 1137 aa17.84■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 CAMKK1Q8N5S9 505 aa17.84■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 MYCBPAPQ8TBZ2 947 aa17.84■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 CD101Q93033 1021 aa17.84■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 GZF1Q9H116 711 aaPredicted RBP17.84■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 LINC00597Q9H2U6 94 aa17.84■□□□□ 0.45
VPS9D1-AS1-201ENST00000562298 CLIC2O15247 247 aa17.83■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 FOXD2O60548 495 aaPredicted RBP17.83■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 EPN2O95208 641 aa17.83■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 CCDC192P0DO97 292 aa17.83■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 CASP1P29466 404 aa17.83■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 AMPD3Q01432 767 aa17.83■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 CYP24A1Q07973 514 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms