RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 CD58P19256 250 aa14.26□□□□□ -0.13
CDH1-204ENST00000562118 CCR2P41597 374 aa14.26□□□□□ -0.13
CDH1-204ENST00000562118 ALDH1A3P47895 512 aa14.26□□□□□ -0.13
CDH1-204ENST00000562118 EPHB3P54753 998 aa14.26□□□□□ -0.13
CDH1-204ENST00000562118 RPL10AP62906 217 aaKnown RBP14.26□□□□□ -0.13
CDH1-204ENST00000562118 APBA1Q02410 837 aa14.26□□□□□ -0.13
CDH1-204ENST00000562118 LRMPQ12912 555 aa14.26□□□□□ -0.13
CDH1-204ENST00000562118 ORC1Q13415 861 aa14.26□□□□□ -0.13
CDH1-204ENST00000562118 PKDCCQ504Y2 493 aa14.26□□□□□ -0.13
CDH1-204ENST00000562118 KLHDC7AQ5VTJ3 777 aa14.26□□□□□ -0.13
CDH1-204ENST00000562118 POTEHQ6S545 545 aa14.26□□□□□ -0.13
CDH1-204ENST00000562118 RRAGAQ7L523 313 aa14.26□□□□□ -0.13
CDH1-204ENST00000562118 GRASPQ7Z6J2 395 aaPredicted RBP14.26□□□□□ -0.13
CDH1-204ENST00000562118 TMEM150AQ86TG1 271 aa14.26□□□□□ -0.13
CDH1-204ENST00000562118 ITIH5Q86UX2 942 aa14.26□□□□□ -0.13
CDH1-204ENST00000562118 LUZP1Q86V48 1076 aa14.26□□□□□ -0.13
CDH1-204ENST00000562118 SMARCD1Q96GM5 515 aa14.26□□□□□ -0.13
CDH1-204ENST00000562118 ZSWIM1Q9BR11 485 aa14.26□□□□□ -0.13
CDH1-204ENST00000562118 RTN4Q9NQC3 1192 aaKnown RBP14.26□□□□□ -0.13
CDH1-204ENST00000562118 EPS15L1Q9UBC2 864 aa14.26□□□□□ -0.13
CDH1-204ENST00000562118 KIAA1257Q9ULG3 409 aa14.26□□□□□ -0.13
CDH1-204ENST00000562118 MYO16Q9Y6X6 1858 aa14.26□□□□□ -0.13
CDH1-204ENST00000562118 NCANO14594 1321 aa14.25□□□□□ -0.13
CDH1-204ENST00000562118 ATP8B3O60423 1300 aa14.25□□□□□ -0.13
CDH1-204ENST00000562118 SOBPA7XYQ1 873 aa14.25□□□□□ -0.13
CDH1-204ENST00000562118 HHLA1C9JL84 531 aa14.25□□□□□ -0.13
CDH1-204ENST00000562118 CLDN5O00501 218 aa14.25□□□□□ -0.13
CDH1-204ENST00000562118 TADA3O75528 432 aa14.25□□□□□ -0.13
CDH1-204ENST00000562118 CCDC130P13994 396 aa14.25□□□□□ -0.13
CDH1-204ENST00000562118 BDNFP23560 247 aa14.25□□□□□ -0.13
CDH1-204ENST00000562118 WEE1P30291 646 aa14.25□□□□□ -0.13
CDH1-204ENST00000562118 GPR15P49685 360 aa14.25□□□□□ -0.13
CDH1-204ENST00000562118 CYP27A1Q02318 531 aa14.25□□□□□ -0.13
CDH1-204ENST00000562118 MGAT5BQ3V5L5 792 aa14.25□□□□□ -0.13
CDH1-204ENST00000562118 PABPC1LQ4VXU2 614 aaKnown RBP14.25□□□□□ -0.13
CDH1-204ENST00000562118 PPP1R26Q5T8A7 1209 aaPredicted RBP14.25□□□□□ -0.13
CDH1-204ENST00000562118 CLEC20AQ6ZU45 233 aa14.25□□□□□ -0.13
CDH1-204ENST00000562118 GAREM2Q75VX8 874 aa14.25□□□□□ -0.13
CDH1-204ENST00000562118 DNAJB7Q7Z6W7 309 aaPredicted RBP14.25□□□□□ -0.13
CDH1-204ENST00000562118 ZDHHC14Q8IZN3 488 aa14.25□□□□□ -0.13
CDH1-204ENST00000562118 ANKRD20A12PQ8NF67 263 aa14.25□□□□□ -0.13
CDH1-204ENST00000562118 SLC2A14Q8TDB8 520 aa14.25□□□□□ -0.13
CDH1-204ENST00000562118 SEPT5Q99719 369 aaPredicted RBP14.25□□□□□ -0.13
CDH1-204ENST00000562118 SMOQ99835 787 aa14.25□□□□□ -0.13
CDH1-204ENST00000562118 UBXN6Q9BZV1 441 aa14.25□□□□□ -0.13
CDH1-204ENST00000562118 VPS16Q9H269 839 aa14.25□□□□□ -0.13
CDH1-204ENST00000562118 ZNF334Q9HCZ1 680 aaPredicted RBP14.25□□□□□ -0.13
CDH1-204ENST00000562118 UBE2TQ9NPD8 197 aaPredicted RBP14.25□□□□□ -0.13
CDH1-204ENST00000562118 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.25□□□□□ -0.13
CDH1-204ENST00000562118 ZFP37Q9Y6Q3 630 aaPredicted RBP14.25□□□□□ -0.13
CDH1-204ENST00000562118 COL4A2P08572 1712 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 F8VP50 259 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 O00370 1275 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 BEST1O76090 585 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 FGF19O95750 216 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 F11P03951 625 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 CSH1P0DML2 217 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 CSH2P0DML3 217 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 VDRP11473 427 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 UCHL3P15374 230 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 PBX1P40424 430 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 MFAP3P55082 362 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 JAM2P57087 298 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 NTHL1P78549 312 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 DDR2Q16832 855 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 IQCEQ6IPM2 695 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 GJB7Q6PEY0 223 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 CREBRFQ8IUR6 639 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 NPAS3Q8IXF0 933 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 FAM71AQ8IYT1 594 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 ELMOD1Q8N336 334 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 ITFG1Q8TB96 612 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 CYFIP2Q96F07 1278 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 ZNF512Q96ME7 567 aaPredicted RBP14.24□□□□□ -0.13
CDH1-204ENST00000562118 DNAI2Q9GZS0 605 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 TSPY26PQ9H489 355 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 DMAP1Q9NPF5 467 aaPredicted RBP14.24□□□□□ -0.13
CDH1-204ENST00000562118 ASAH2Q9NR71 780 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 COMMD8Q9NX08 183 aa14.24□□□□□ -0.13
CDH1-204ENST00000562118 A0A1W2PQC6 194 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 SLC38A8A6NNN8 435 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 C2CD4DB7Z1M9 353 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 ZNF197O14709 1029 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 EPHB6O15197 1021 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 TPM2P07951 284 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 NPR3P17342 541 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 TRIM21P19474 475 aaKnown RBP14.23□□□□□ -0.13
CDH1-204ENST00000562118 FSHRP23945 695 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 RPL34P49207 117 aaKnown RBP14.23□□□□□ -0.13
CDH1-204ENST00000562118 NR1I3Q14994 352 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 VEPH1Q14D04 833 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 STILQ15468 1287 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 RAB41Q5JT25 222 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 FKBP15Q5T1M5 1219 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 SNX30Q5VWJ9 437 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 TMEM270Q6UE05 265 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 LCLAT1Q6UWP7 414 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 OTOP3Q7RTS5 596 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 TTC30AQ86WT1 665 aa14.23□□□□□ -0.13
CDH1-204ENST00000562118 HS6ST3Q8IZP7 471 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms