RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 SNX9Q9Y5X1 595 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 WNT6Q9Y6F9 365 aa12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 CNOT1A5YKK6 2376 aaKnown RBP12.69□□□□□ -0.38
CARMIL3-204ENST00000561354 MAP1BP46821 2468 aaKnown RBP12.68□□□□□ -0.38
CARMIL3-204ENST00000561354 MYMKA6NI61 221 aa12.68□□□□□ -0.38
CARMIL3-204ENST00000561354 KCNK5O95279 499 aa12.68□□□□□ -0.38
CARMIL3-204ENST00000561354 GCNT3O95395 438 aa12.68□□□□□ -0.38
CARMIL3-204ENST00000561354 PFKLP17858 780 aa12.68□□□□□ -0.38
CARMIL3-204ENST00000561354 PDE6CP51160 858 aa12.68□□□□□ -0.38
CARMIL3-204ENST00000561354 SOWAHAQ2M3V2 549 aa12.68□□□□□ -0.38
CARMIL3-204ENST00000561354 RRAGBQ5VZM2 374 aa12.68□□□□□ -0.38
CARMIL3-204ENST00000561354 RNF43Q68DV7 783 aa12.68□□□□□ -0.38
CARMIL3-204ENST00000561354 SCARA3Q6AZY7 606 aa12.68□□□□□ -0.38
CARMIL3-204ENST00000561354 LIMS2Q7Z4I7 341 aa12.68□□□□□ -0.38
CARMIL3-204ENST00000561354 C11orf74Q86VG3 221 aa12.68□□□□□ -0.38
CARMIL3-204ENST00000561354 ADGRF2Q8IZF7 708 aa12.68□□□□□ -0.38
CARMIL3-204ENST00000561354 ARL14EPQ8N8R7 260 aaPredicted RBP12.68□□□□□ -0.38
CARMIL3-204ENST00000561354 SMOC1Q9H4F8 434 aa12.68□□□□□ -0.38
CARMIL3-204ENST00000561354 TBC1D7Q9P0N9 293 aa12.68□□□□□ -0.38
CARMIL3-204ENST00000561354 SIX4Q9UIU6 781 aa12.68□□□□□ -0.38
CARMIL3-204ENST00000561354 FBXO2Q9UK22 296 aaPredicted RBP12.68□□□□□ -0.38
CARMIL3-204ENST00000561354 ARHGAP26Q9UNA1 814 aa12.68□□□□□ -0.38
CARMIL3-204ENST00000561354 SRPRBQ9Y5M8 271 aaKnown RBP12.68□□□□□ -0.38
CARMIL3-204ENST00000561354 FRMD3A2A2Y4 597 aa12.67□□□□□ -0.38
CARMIL3-204ENST00000561354 BCLAF3A2AJT9 711 aaKnown RBP12.67□□□□□ -0.38
CARMIL3-204ENST00000561354 KIAA0391O15091 583 aaKnown RBP12.67□□□□□ -0.38
CARMIL3-204ENST00000561354 CAVIN2O95810 425 aa12.67□□□□□ -0.38
CARMIL3-204ENST00000561354 KRT19P08727 400 aa12.67□□□□□ -0.38
CARMIL3-204ENST00000561354 HDCP19113 662 aa12.67□□□□□ -0.38
CARMIL3-204ENST00000561354 TXLNAP40222 546 aa12.67□□□□□ -0.38
CARMIL3-204ENST00000561354 CASP5P51878 434 aa12.67□□□□□ -0.38
CARMIL3-204ENST00000561354 MYO1EQ12965 1108 aa12.67□□□□□ -0.38
CARMIL3-204ENST00000561354 PSMD2Q13200 908 aa12.67□□□□□ -0.38
CARMIL3-204ENST00000561354 KCNB1Q14721 858 aa12.67□□□□□ -0.38
CARMIL3-204ENST00000561354 CCDC142Q17RM4 750 aa12.67□□□□□ -0.38
CARMIL3-204ENST00000561354 VSTM1Q6UX27 236 aa12.67□□□□□ -0.38
CARMIL3-204ENST00000561354 C4orf50Q6ZRC1 276 aa12.67□□□□□ -0.38
CARMIL3-204ENST00000561354 SCN4BQ8IWT1 228 aa12.67□□□□□ -0.38
CARMIL3-204ENST00000561354 SYCP3Q8IZU3 236 aa12.67□□□□□ -0.38
CARMIL3-204ENST00000561354 KIAA1958Q8N8K9 716 aa12.67□□□□□ -0.38
CARMIL3-204ENST00000561354 SH3RF2Q8TEC5 729 aa12.67□□□□□ -0.38
CARMIL3-204ENST00000561354 SPATA17Q96L03 361 aa12.67□□□□□ -0.38
CARMIL3-204ENST00000561354 CBWD1Q9BRT8 395 aa12.67□□□□□ -0.38
CARMIL3-204ENST00000561354 PDE11AQ9HCR9 933 aa12.67□□□□□ -0.38
CARMIL3-204ENST00000561354 CLIC4Q9Y696 253 aa12.67□□□□□ -0.38
CARMIL3-204ENST00000561354 ANAPC1Q9H1A4 1944 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 GOLGA8IPA6NC78 632 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 C2orf78A6NCI8 922 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 GOLGA8JA6NMD2 632 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 TULP1O00294 542 aaPredicted RBP12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 DCLK1O15075 740 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 HCRTO43612 131 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 NFATC1O95644 943 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 TMEM191BP0C7N4 346 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 CREB5Q02930 508 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 SURF1Q15526 300 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 MAPRE1Q15691 268 aaKnown RBP12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 USP39Q53GS9 565 aaKnown RBP12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 TCEAL6Q6IPX3 200 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 CCDC73Q6ZRK6 1079 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 RASSF3Q86WH2 238 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 GPD1LQ8N335 351 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 TSTD1Q8NFU3 115 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 USP33Q8TEY7 942 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 TCEAL3Q969E4 200 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 HPDLQ96IR7 371 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 EDEM2Q9BV94 578 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 MTMR12Q9C0I1 747 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 LINC00597Q9H2U6 94 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 INTS13Q9NVM9 706 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 EHD2Q9NZN4 543 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 MAGEC2Q9UBF1 373 aaPredicted RBP12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 CDH9Q9ULB4 789 aa12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 R3HCC1Q9Y3T6 440 aaKnown RBP12.66□□□□□ -0.38
CARMIL3-204ENST00000561354 KIAA1549LQ6ZVL6 1849 aa12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 K7EQS6 105 aa12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 ATP2C2O75185 946 aa12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 IDEP14735 1019 aa12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 LMO2P25791 158 aa12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 GBP1P32455 592 aa12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 OPRD1P41143 372 aa12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 PPP3CCP48454 512 aa12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 DGKEP52429 567 aa12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 ZXDBP98169 803 aa12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 PMS2CLQ68D20 193 aa12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 DENND5BQ6ZUT9 1274 aa12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 TTC16Q8NEE8 873 aa12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 KBTBD7Q8WVZ9 684 aa12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 MYLPFQ96A32 169 aa12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 ANKRD36BP1Q96IX9 119 aa12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 FAM84AQ96KN4 292 aa12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 CNOT6LQ96LI5 555 aaKnown RBP12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 SYT15Q9BQS2 421 aa12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 TTLL2Q9BWV7 592 aa12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 PCIF1Q9H4Z3 704 aa12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 CRTAC1Q9NQ79 661 aa12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 PANK4Q9NVE7 773 aa12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 MORC2Q9Y6X9 1032 aaPredicted RBP12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 MYO16Q9Y6X6 1858 aa12.65□□□□□ -0.38
CARMIL3-204ENST00000561354 LNP1A1A4G5 178 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms