RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 GALR2O43603 387 aaPredicted RBP8.56□□□□□ -1.04
CPNE6-218ENST00000560845 CILPO75339 1184 aa8.56□□□□□ -1.04
CPNE6-218ENST00000560845 CALCAP01258 141 aa8.56□□□□□ -1.04
CPNE6-218ENST00000560845 THP07101 528 aa8.56□□□□□ -1.04
CPNE6-218ENST00000560845 BRD2P25440 801 aaKnown RBP8.56□□□□□ -1.04
CPNE6-218ENST00000560845 PPM1AP35813 382 aa8.56□□□□□ -1.04
CPNE6-218ENST00000560845 CBX1P83916 185 aa8.56□□□□□ -1.04
CPNE6-218ENST00000560845 PLCB3Q01970 1234 aa8.56□□□□□ -1.04
CPNE6-218ENST00000560845 INCA1Q0VD86 236 aa8.56□□□□□ -1.04
CPNE6-218ENST00000560845 MTMR3Q13615 1198 aa8.56□□□□□ -1.04
CPNE6-218ENST00000560845 CLEC16AQ2KHT3 1053 aa8.56□□□□□ -1.04
CPNE6-218ENST00000560845 ZNF569Q5MCW4 686 aa8.56□□□□□ -1.04
CPNE6-218ENST00000560845 GLB1LQ6UWU2 654 aa8.56□□□□□ -1.04
CPNE6-218ENST00000560845 UBALD2Q8IYN6 164 aa8.56□□□□□ -1.04
CPNE6-218ENST00000560845 URGCPQ8TCY9 931 aa8.56□□□□□ -1.04
CPNE6-218ENST00000560845 CTNNBL1Q8WYA6 563 aaPredicted RBP8.56□□□□□ -1.04
CPNE6-218ENST00000560845 ALS2CR12Q96Q35 445 aa8.56□□□□□ -1.04
CPNE6-218ENST00000560845 MMS19Q96T76 1030 aa8.56□□□□□ -1.04
CPNE6-218ENST00000560845 PCDHB18PQ96TA0 734 aa8.56□□□□□ -1.04
CPNE6-218ENST00000560845 ELAC1Q9H777 363 aaKnown RBP8.56□□□□□ -1.04
CPNE6-218ENST00000560845 NGRNQ9NPE2 291 aaKnown RBP8.56□□□□□ -1.04
CPNE6-218ENST00000560845 OGFRQ9NZT2 677 aa8.56□□□□□ -1.04
CPNE6-218ENST00000560845 CDH22Q9UJ99 828 aa8.56□□□□□ -1.04
CPNE6-218ENST00000560845 CDC23Q9UJX2 597 aa8.56□□□□□ -1.04
CPNE6-218ENST00000560845 INPP5FQ9Y2H2 1132 aa8.56□□□□□ -1.04
CPNE6-218ENST00000560845 NR2E1Q9Y466 385 aa8.56□□□□□ -1.04
CPNE6-218ENST00000560845 SNX9Q9Y5X1 595 aa8.56□□□□□ -1.04
CPNE6-218ENST00000560845 PDCD11Q14690 1871 aaKnown RBP8.55□□□□□ -1.04
CPNE6-218ENST00000560845 RIF1Q5UIP0 2472 aaKnown RBP8.55□□□□□ -1.04
CPNE6-218ENST00000560845 SPTBN4Q9H254 2564 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 CASTOR2A6NHX0 329 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 BTNL10A8MVZ5 291 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 C2CD4DB7Z1M9 353 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 PODXLO00592 558 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 HOXA2O43364 376 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 RTN2O75298 545 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 TACC1O75410 805 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 EOMESO95936 686 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 PAEPP09466 180 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 TMEM253P0C7T8 217 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 GZMAP12544 262 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 CD19P15391 556 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 PBX3P40426 434 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 GALCP54803 685 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 CDH8P55286 799 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 FAM189BP81408 668 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 FOXK2Q01167 660 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 ZNF394Q53GI3 561 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 KCNT2Q6UVM3 1135 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 ASCL5Q7RTU5 278 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 LRRC43Q8N309 656 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 TMEM105Q8N8V8 129 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 GSTCDQ8NEC7 633 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 MNS1Q8NEH6 495 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 UBE2Q2Q8WVN8 375 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 RFFLQ8WZ73 363 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 RABGGTAQ92696 567 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 CASP10Q92851 521 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 ZNF558Q96NG5 402 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 NECTIN4Q96NY8 510 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 CASD1Q96PB1 797 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 NOX5Q96PH1 765 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 ELOVL4Q9GZR5 314 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 POMKQ9H5K3 350 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 GDAP2Q9NXN4 497 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 TAS2R14Q9NYV8 317 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 HMGXB4Q9UGU5 601 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 SORCS3Q9UPU3 1222 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 HCFC2Q9Y5Z7 792 aa8.55□□□□□ -1.04
CPNE6-218ENST00000560845 A0A0A6YYK5 440 aaPredicted RBP8.54□□□□□ -1.04
CPNE6-218ENST00000560845 CTAGE9A4FU28 777 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 ANKRD62A6NC57 917 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 PRR23AA6NEV1 266 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 KPNA7A9QM74 516 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 SPTLC1O15269 473 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 MED7O43513 233 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 MOCS3O95396 460 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 LSM8O95777 96 aaKnown RBP8.54□□□□□ -1.04
CPNE6-218ENST00000560845 POMCP01189 267 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 FTLP02792 175 aaPredicted RBP8.54□□□□□ -1.04
CPNE6-218ENST00000560845 CYP1A1P04798 512 aaPredicted RBP8.54□□□□□ -1.04
CPNE6-218ENST00000560845 ABCB4P21439 1286 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 RPL9P32969 192 aaKnown RBP8.54□□□□□ -1.04
CPNE6-218ENST00000560845 NBL1P41271 181 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 NSFP46459 744 aaKnown RBP8.54□□□□□ -1.04
CPNE6-218ENST00000560845 AFF1P51825 1210 aaKnown RBP8.54□□□□□ -1.04
CPNE6-218ENST00000560845 NDST1P52848 882 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 RAD23BP54727 409 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 NAP1L1P55209 391 aaKnown RBP8.54□□□□□ -1.04
CPNE6-218ENST00000560845 CENPCQ03188 943 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 KRT17Q04695 432 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 ORC1Q13415 861 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 TUSC3Q13454 348 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 SMC1AQ14683 1233 aaKnown RBP8.54□□□□□ -1.04
CPNE6-218ENST00000560845 IFI16Q16666 785 aaKnown RBP8.54□□□□□ -1.04
CPNE6-218ENST00000560845 NOMO2Q5JPE7 1267 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 CLLU1OSQ5K130 101 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 TEX35Q5T0J7 233 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 NAA35Q5VZE5 725 aa8.54□□□□□ -1.04
CPNE6-218ENST00000560845 CES5AQ6NT32 575 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms