RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 USP13Q92995 863 aaPredicted RBP14.53□□□□□ -0.08
SMAD3-214ENST00000560402 FUCA2Q9BTY2 467 aa14.53□□□□□ -0.08
SMAD3-214ENST00000560402 PANK2Q9BZ23 570 aa14.53□□□□□ -0.08
SMAD3-214ENST00000560402 GOLPH3LQ9H4A5 285 aa14.53□□□□□ -0.08
SMAD3-214ENST00000560402 KIAA1586Q9HCI6 787 aa14.53□□□□□ -0.08
SMAD3-214ENST00000560402 SNX9Q9Y5X1 595 aa14.53□□□□□ -0.08
SMAD3-214ENST00000560402 MYO16Q9Y6X6 1858 aa14.52□□□□□ -0.08
SMAD3-214ENST00000560402 A0A087X0B3 334 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 FAM237AA0A1B0GTK4 181 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 A0A1B0GVL5 298 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 GOLGA8IPA6NC78 632 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 ZNF233A6NK53 670 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 GOLGA8JA6NMD2 632 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 TRDMT1O14717 391 aaKnown RBP14.52□□□□□ -0.09
SMAD3-214ENST00000560402 ATG13O75143 517 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 TADA3O75528 432 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 PRPF6O94906 941 aaKnown RBP14.52□□□□□ -0.09
SMAD3-214ENST00000560402 TNNC2P02585 160 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 KRT19P08727 400 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 PDE6CP51160 858 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 NDUFA8P51970 172 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 AMPD3Q01432 767 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 USP4Q13107 963 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 MAPRE1Q15691 268 aaKnown RBP14.52□□□□□ -0.09
SMAD3-214ENST00000560402 TMEM196Q5HYL7 178 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 CC2D1AQ6P1N0 951 aaPredicted RBP14.52□□□□□ -0.09
SMAD3-214ENST00000560402 GPIHBP1Q8IV16 184 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 WDR49Q8IV35 697 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 ZSWIM2Q8NEG5 633 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 TTC8Q8TAM2 541 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 NETO1Q8TDF5 533 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 NOC3LQ8WTT2 800 aaKnown RBP14.52□□□□□ -0.09
SMAD3-214ENST00000560402 PPP1R9BQ96SB3 815 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 FGFBP2Q9BYJ0 223 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 SMG9Q9H0W8 520 aaKnown RBP14.52□□□□□ -0.09
SMAD3-214ENST00000560402 PCIF1Q9H4Z3 704 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 MAGEF1Q9HAY2 307 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 PDE11AQ9HCR9 933 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 PARD6AQ9NPB6 346 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 HPS4Q9NQG7 708 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 GKN1Q9NS71 199 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 INTS13Q9NVM9 706 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 SIX4Q9UIU6 781 aa14.52□□□□□ -0.09
SMAD3-214ENST00000560402 MAGED2Q9UNF1 606 aaPredicted RBP14.52□□□□□ -0.09
SMAD3-214ENST00000560402 TRAV19A0A0A6YYK7 116 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 ZNF202O95125 648 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 USP17L7P0C7H9 530 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 TCF3P15923 654 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 PFKLP17858 780 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 DRD1P21728 446 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 GPR15P49685 360 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 MTF1Q14872 753 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 E2F4Q16254 413 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 DDR2Q16832 855 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 DUOXA2Q1HG44 320 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 FBXO43Q4G163 708 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 TXNDC8Q6A555 127 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 CNNM4Q6P4Q7 775 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 VSTM1Q6UX27 236 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 CEP68Q76N32 757 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 LIMS2Q7Z4I7 341 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 OSTM1Q86WC4 334 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 CEP57L1Q8IYX8 460 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 CPA6Q8N4T0 437 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 PDILTQ8N807 584 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 SYT15Q9BQS2 421 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 TRIM9Q9C026 710 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 KBTBD4Q9NVX7 518 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 USP25Q9UHP3 1055 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 GTF3C4Q9UKN8 822 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 CDH9Q9ULB4 789 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 CCL26Q9Y258 94 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 NCOR2Q9Y618 2525 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 EML5Q05BV3 1969 aa14.51□□□□□ -0.09
SMAD3-214ENST00000560402 GOLGA6L19H0YKK7 550 aa14.5□□□□□ -0.09
SMAD3-214ENST00000560402 HRO43593 1189 aa14.5□□□□□ -0.09
SMAD3-214ENST00000560402 CKMP06732 381 aa14.5□□□□□ -0.09
SMAD3-214ENST00000560402 ACAT1P24752 427 aaKnown RBP14.5□□□□□ -0.09
SMAD3-214ENST00000560402 CYP2F1P24903 491 aa14.5□□□□□ -0.09
SMAD3-214ENST00000560402 CDR1P51861 262 aa14.5□□□□□ -0.09
SMAD3-214ENST00000560402 ATXN1P54253 815 aaKnown RBP14.5□□□□□ -0.09
SMAD3-214ENST00000560402 SNRPFP62306 86 aaKnown RBP14.5□□□□□ -0.09
SMAD3-214ENST00000560402 TPM4P67936 248 aa14.5□□□□□ -0.09
SMAD3-214ENST00000560402 DMWDQ09019 674 aa14.5□□□□□ -0.09
SMAD3-214ENST00000560402 SPEM2Q0P670 501 aa14.5□□□□□ -0.09
SMAD3-214ENST00000560402 ZNF77Q15935 545 aa14.5□□□□□ -0.09
SMAD3-214ENST00000560402 CSRP2Q16527 193 aa14.5□□□□□ -0.09
SMAD3-214ENST00000560402 LPAL2Q16609 132 aa14.5□□□□□ -0.09
SMAD3-214ENST00000560402 SOWAHAQ2M3V2 549 aa14.5□□□□□ -0.09
SMAD3-214ENST00000560402 FAM171BQ6P995 826 aa14.5□□□□□ -0.09
SMAD3-214ENST00000560402 ELOA2Q8IYF1 753 aaPredicted RBP14.5□□□□□ -0.09
SMAD3-214ENST00000560402 ATP2A3Q93084 1043 aa14.5□□□□□ -0.09
SMAD3-214ENST00000560402 HPDLQ96IR7 371 aa14.5□□□□□ -0.09
SMAD3-214ENST00000560402 SPATA17Q96L03 361 aa14.5□□□□□ -0.09
SMAD3-214ENST00000560402 EBF3Q9H4W6 596 aa14.5□□□□□ -0.09
SMAD3-214ENST00000560402 SEMA4GQ9NTN9 838 aa14.5□□□□□ -0.09
SMAD3-214ENST00000560402 HSPBP1Q9NZL4 362 aa14.5□□□□□ -0.09
SMAD3-214ENST00000560402 EHD2Q9NZN4 543 aa14.5□□□□□ -0.09
SMAD3-214ENST00000560402 TULP1O00294 542 aaPredicted RBP14.49□□□□□ -0.09
SMAD3-214ENST00000560402 AKAP3O75969 853 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms