RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 KBTBD7Q8WVZ9 684 aa18.63■□□□□ 0.57
CRTC3-208ENST00000560098 HPS3Q969F9 1004 aa18.63■□□□□ 0.57
CRTC3-208ENST00000560098 SYT15Q9BQS2 421 aa18.63■□□□□ 0.57
CRTC3-208ENST00000560098 MAGEC2Q9UBF1 373 aaPredicted RBP18.63■□□□□ 0.57
CRTC3-208ENST00000560098 CDH9Q9ULB4 789 aa18.63■□□□□ 0.57
CRTC3-208ENST00000560098 AXIN1O15169 862 aa18.62■□□□□ 0.57
CRTC3-208ENST00000560098 GDF9O60383 454 aa18.62■□□□□ 0.57
CRTC3-208ENST00000560098 IFNAR2P48551 515 aa18.62■□□□□ 0.57
CRTC3-208ENST00000560098 PSMC1P62191 440 aaKnown RBP18.62■□□□□ 0.57
CRTC3-208ENST00000560098 USP4Q13107 963 aa18.62■□□□□ 0.57
CRTC3-208ENST00000560098 NAIF1Q69YI7 327 aaPredicted RBP18.62■□□□□ 0.57
CRTC3-208ENST00000560098 VSTM1Q6UX27 236 aa18.62■□□□□ 0.57
CRTC3-208ENST00000560098 WDR49Q8IV35 697 aa18.62■□□□□ 0.57
CRTC3-208ENST00000560098 ARL14EPQ8N8R7 260 aaPredicted RBP18.62■□□□□ 0.57
CRTC3-208ENST00000560098 LINC00301Q8NCQ3 95 aa18.62■□□□□ 0.57
CRTC3-208ENST00000560098 ATP2A3Q93084 1043 aa18.62■□□□□ 0.57
CRTC3-208ENST00000560098 MYLPFQ96A32 169 aa18.62■□□□□ 0.57
CRTC3-208ENST00000560098 LOXL4Q96JB6 756 aa18.62■□□□□ 0.57
CRTC3-208ENST00000560098 SPATA17Q96L03 361 aa18.62■□□□□ 0.57
CRTC3-208ENST00000560098 CNTNAP3BQ96NU0 1288 aa18.62■□□□□ 0.57
CRTC3-208ENST00000560098 CNTNAP3Q9BZ76 1288 aa18.62■□□□□ 0.57
CRTC3-208ENST00000560098 KIAA1586Q9HCI6 787 aa18.62■□□□□ 0.57
CRTC3-208ENST00000560098 CRTAC1Q9NQ79 661 aa18.62■□□□□ 0.57
CRTC3-208ENST00000560098 KBTBD4Q9NVX7 518 aa18.62■□□□□ 0.57
CRTC3-208ENST00000560098 HSPBP1Q9NZL4 362 aa18.62■□□□□ 0.57
CRTC3-208ENST00000560098 GCNT4Q9P109 453 aa18.62■□□□□ 0.57
CRTC3-208ENST00000560098 WNT6Q9Y6F9 365 aa18.62■□□□□ 0.57
CRTC3-208ENST00000560098 C2orf78A6NCI8 922 aa18.61■□□□□ 0.57
CRTC3-208ENST00000560098 STX6O43752 255 aa18.61■□□□□ 0.57
CRTC3-208ENST00000560098 CCDC192P0DO97 292 aa18.61■□□□□ 0.57
CRTC3-208ENST00000560098 HOXD13P35453 343 aa18.61■□□□□ 0.57
CRTC3-208ENST00000560098 KCNB1Q14721 858 aa18.61■□□□□ 0.57
CRTC3-208ENST00000560098 MAPRE1Q15691 268 aaKnown RBP18.61■□□□□ 0.57
CRTC3-208ENST00000560098 E2F4Q16254 413 aa18.61■□□□□ 0.57
CRTC3-208ENST00000560098 EML3Q32P44 896 aa18.61■□□□□ 0.57
CRTC3-208ENST00000560098 SH3RF2Q8TEC5 729 aa18.61■□□□□ 0.57
CRTC3-208ENST00000560098 CD101Q93033 1021 aa18.61■□□□□ 0.57
CRTC3-208ENST00000560098 CEP295NLQ96MC4 621 aa18.61■□□□□ 0.57
CRTC3-208ENST00000560098 TRIM9Q9C026 710 aa18.61■□□□□ 0.57
CRTC3-208ENST00000560098 ARRDC1-AS1Q9H2J1 176 aa18.61■□□□□ 0.57
CRTC3-208ENST00000560098 CUEDC2Q9H467 287 aa18.61■□□□□ 0.57
CRTC3-208ENST00000560098 FOXD4L1Q9NU39 408 aa18.61■□□□□ 0.57
CRTC3-208ENST00000560098 EIF3DO15371 548 aaKnown RBP eCLIP18.6■□□□□ 0.57
CRTC3-208ENST00000560098 AKAP3O75969 853 aa18.6■□□□□ 0.57
CRTC3-208ENST00000560098 ADRB1P08588 477 aa18.6■□□□□ 0.57
CRTC3-208ENST00000560098 PDGFRBP09619 1106 aa18.6■□□□□ 0.57
CRTC3-208ENST00000560098 TCF3P15923 654 aa18.6■□□□□ 0.57
CRTC3-208ENST00000560098 HDCP19113 662 aa18.6■□□□□ 0.57
CRTC3-208ENST00000560098 WARSP23381 471 aaKnown RBP18.6■□□□□ 0.57
CRTC3-208ENST00000560098 BDNFP23560 247 aa18.6■□□□□ 0.57
CRTC3-208ENST00000560098 GRIK1P39086 918 aa18.6■□□□□ 0.57
CRTC3-208ENST00000560098 RAP1GAPP47736 663 aa18.6■□□□□ 0.57
CRTC3-208ENST00000560098 PDE6CP51160 858 aa18.6■□□□□ 0.57
CRTC3-208ENST00000560098 AMPD3Q01432 767 aa18.6■□□□□ 0.57
CRTC3-208ENST00000560098 PPM1JQ5JR12 505 aa18.6■□□□□ 0.57
CRTC3-208ENST00000560098 TRAPPC11Q7Z392 1133 aa18.6■□□□□ 0.57
CRTC3-208ENST00000560098 KBTBD6Q86V97 674 aa18.6■□□□□ 0.57
CRTC3-208ENST00000560098 RPLP0P6Q8NHW5 317 aa18.6■□□□□ 0.57
CRTC3-208ENST00000560098 HHIPQ96QV1 700 aa18.6■□□□□ 0.57
CRTC3-208ENST00000560098 MMS19Q96T76 1030 aa18.6■□□□□ 0.57
CRTC3-208ENST00000560098 POLR3BQ9NW08 1133 aaPredicted RBP18.6■□□□□ 0.57
CRTC3-208ENST00000560098 ARHGAP26Q9UNA1 814 aa18.6■□□□□ 0.57
CRTC3-208ENST00000560098 SPTBN2O15020 2390 aa18.59■□□□□ 0.57
CRTC3-208ENST00000560098 ZNF638Q14966 1978 aaKnown RBP18.59■□□□□ 0.57
CRTC3-208ENST00000560098 SPTLC2O15270 562 aa18.59■□□□□ 0.57
CRTC3-208ENST00000560098 PPP6R2O75170 966 aa18.59■□□□□ 0.57
CRTC3-208ENST00000560098 EPN2O95208 641 aa18.59■□□□□ 0.57
CRTC3-208ENST00000560098 ASIC1P78348 528 aa18.59■□□□□ 0.57
CRTC3-208ENST00000560098 CYP27A1Q02318 531 aa18.59■□□□□ 0.57
CRTC3-208ENST00000560098 NR1H3Q13133 447 aa18.59■□□□□ 0.57
CRTC3-208ENST00000560098 AASDHQ4L235 1098 aaPredicted RBP18.59■□□□□ 0.57
CRTC3-208ENST00000560098 DENND5BQ6ZUT9 1274 aa18.59■□□□□ 0.57
CRTC3-208ENST00000560098 EPM2AIP1Q7L775 607 aaPredicted RBP18.59■□□□□ 0.57
CRTC3-208ENST00000560098 SYT13Q7L8C5 426 aa18.59■□□□□ 0.57
CRTC3-208ENST00000560098 C12orf50Q8NA57 414 aaPredicted RBP18.59■□□□□ 0.57
CRTC3-208ENST00000560098 MYCBPAPQ8TBZ2 947 aa18.59■□□□□ 0.57
CRTC3-208ENST00000560098 ZNF507Q8TCN5 953 aa18.59■□□□□ 0.57
CRTC3-208ENST00000560098 EZH1Q92800 747 aaPredicted RBP18.59■□□□□ 0.57
CRTC3-208ENST00000560098 EHD2Q9NZN4 543 aa18.59■□□□□ 0.57
CRTC3-208ENST00000560098 ZNF806P0C7X5 589 aa18.58■□□□□ 0.57
CRTC3-208ENST00000560098 PFKLP17858 780 aa18.58■□□□□ 0.57
CRTC3-208ENST00000560098 ANXA13P27216 316 aa18.58■□□□□ 0.57
CRTC3-208ENST00000560098 USP46P62068 366 aa18.58■□□□□ 0.57
CRTC3-208ENST00000560098 SF3A2Q15428 464 aaKnown RBP18.58■□□□□ 0.57
CRTC3-208ENST00000560098 CCDC6Q16204 474 aa18.58■□□□□ 0.57
CRTC3-208ENST00000560098 SNRNP35Q16560 246 aaKnown RBP18.58■□□□□ 0.57
CRTC3-208ENST00000560098 RDH13Q8NBN7 331 aa18.58■□□□□ 0.57
CRTC3-208ENST00000560098 ACDQ96AP0 544 aa18.58■□□□□ 0.57
CRTC3-208ENST00000560098 DHX58Q96C10 678 aa18.58■□□□□ 0.57
CRTC3-208ENST00000560098 PCED1BQ96HM7 432 aa18.58■□□□□ 0.57
CRTC3-208ENST00000560098 ZC3H10Q96K80 434 aaKnown RBP18.58■□□□□ 0.57
CRTC3-208ENST00000560098 LINC00597Q9H2U6 94 aa18.58■□□□□ 0.57
CRTC3-208ENST00000560098 AGPAT3Q9NRZ7 376 aa18.58■□□□□ 0.57
CRTC3-208ENST00000560098 TRPM5Q9NZQ8 1165 aa18.58■□□□□ 0.57
CRTC3-208ENST00000560098 TRIM66O15016 1216 aa18.57■□□□□ 0.56
CRTC3-208ENST00000560098 TGFB1I1O43294 461 aa18.57■□□□□ 0.56
CRTC3-208ENST00000560098 NFATC1O95644 943 aa18.57■□□□□ 0.56
CRTC3-208ENST00000560098 CST3P01034 146 aaPredicted RBP18.57■□□□□ 0.56
CRTC3-208ENST00000560098 DLATP10515 647 aaKnown RBP18.57■□□□□ 0.56
CRTC3-208ENST00000560098 TNNI1P19237 187 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms